RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 NBR1Q14596 966 aa16.26■□□□□ 0.19
CBX3-203ENST00000409747 KRT79Q5XKE5 535 aa16.26■□□□□ 0.19
CBX3-203ENST00000409747 KANK3Q6NY19 840 aa16.26■□□□□ 0.19
CBX3-203ENST00000409747 RHOBTB2Q9BYZ6 727 aa16.26■□□□□ 0.19
CBX3-203ENST00000409747 UPF2Q9HAU5 1272 aaKnown RBP16.26■□□□□ 0.19
CBX3-203ENST00000409747 DDX19AQ9NUU7 478 aaKnown RBP16.26■□□□□ 0.19
CBX3-203ENST00000409747 PHLPP2Q6ZVD8 1323 aa16.26■□□□□ 0.19
CBX3-203ENST00000409747 KMT2EQ8IZD2 1858 aa16.25■□□□□ 0.19
CBX3-203ENST00000409747 THP07101 528 aa16.25■□□□□ 0.19
CBX3-203ENST00000409747 LIG1P18858 919 aa16.25■□□□□ 0.19
CBX3-203ENST00000409747 PTPN5P54829 565 aa16.25■□□□□ 0.19
CBX3-203ENST00000409747 PLEKHA4Q9H4M7 779 aa16.25■□□□□ 0.19
CBX3-203ENST00000409747 FNIP2Q9P278 1114 aa16.25■□□□□ 0.19
CBX3-203ENST00000409747 DNM3Q9UQ16 869 aa16.25■□□□□ 0.19
CBX3-203ENST00000409747 PCDHB6Q9Y5E3 794 aa16.25■□□□□ 0.19
CBX3-203ENST00000409747 PLXNA3P51805 1871 aa16.25■□□□□ 0.19
CBX3-203ENST00000409747 F8W810 466 aa16.25■□□□□ 0.19
CBX3-203ENST00000409747 RECQL4O94761 1208 aa16.25■□□□□ 0.19
CBX3-203ENST00000409747 TOB1P50616 345 aaPredicted RBP16.25■□□□□ 0.19
CBX3-203ENST00000409747 ECM1Q16610 540 aa16.25■□□□□ 0.19
CBX3-203ENST00000409747 DTHD1Q6ZMT9 781 aa16.25■□□□□ 0.19
CBX3-203ENST00000409747 STAMQ92783 540 aa16.25■□□□□ 0.19
CBX3-203ENST00000409747 GPR62Q9BZJ7 368 aa16.25■□□□□ 0.19
CBX3-203ENST00000409747 SNTG2Q9NY99 539 aa16.25■□□□□ 0.19
CBX3-203ENST00000409747 C2orf16Q68DN1 1984 aa16.24■□□□□ 0.19
CBX3-203ENST00000409747 BRD1O95696 1058 aa16.24■□□□□ 0.19
CBX3-203ENST00000409747 ELAVL2Q12926 359 aaKnown RBP16.24■□□□□ 0.19
CBX3-203ENST00000409747 RILPL1Q5EBL4 403 aa16.24■□□□□ 0.19
CBX3-203ENST00000409747 RIN2Q8WYP3 895 aaPredicted RBP16.24■□□□□ 0.19
CBX3-203ENST00000409747 LIMD1Q9UGP4 676 aa16.24■□□□□ 0.19
CBX3-203ENST00000409747 CCDC195A0A1B0GUA6 201 aa16.23■□□□□ 0.19
CBX3-203ENST00000409747 CASTOR2A6NHX0 329 aa16.23■□□□□ 0.19
CBX3-203ENST00000409747 TTLL13PA6NNM8 815 aa16.23■□□□□ 0.19
CBX3-203ENST00000409747 K7ERI5 159 aa16.23■□□□□ 0.19
CBX3-203ENST00000409747 PTGESO14684 152 aa16.23■□□□□ 0.19
CBX3-203ENST00000409747 NUBP1P53384 320 aa16.23■□□□□ 0.19
CBX3-203ENST00000409747 DMP1Q13316 513 aaPredicted RBP16.23■□□□□ 0.19
CBX3-203ENST00000409747 ATF7IP2Q5U623 682 aa16.23■□□□□ 0.19
CBX3-203ENST00000409747 MCTP1Q6DN14 999 aa16.23■□□□□ 0.19
CBX3-203ENST00000409747 PDXDC1Q6P996 788 aa16.23■□□□□ 0.19
CBX3-203ENST00000409747 DRC1Q96MC2 740 aa16.23■□□□□ 0.19
CBX3-203ENST00000409747 KIFC3Q9BVG8 833 aa16.23■□□□□ 0.19
CBX3-203ENST00000409747 ZDHHC7Q9NXF8 308 aa16.23■□□□□ 0.19
CBX3-203ENST00000409747 ASGR2P07307 311 aa16.22■□□□□ 0.19
CBX3-203ENST00000409747 KCTD17Q8N5Z5 321 aa16.22■□□□□ 0.19
CBX3-203ENST00000409747 B3GALT6Q96L58 329 aa16.22■□□□□ 0.19
CBX3-203ENST00000409747 TIPINQ9BVW5 301 aa16.22■□□□□ 0.19
CBX3-203ENST00000409747 IRF2BPLQ9H1B7 796 aa16.22■□□□□ 0.19
CBX3-203ENST00000409747 C17orf75Q9HAS0 396 aa16.22■□□□□ 0.19
CBX3-203ENST00000409747 WDR6Q9NNW5 1121 aaKnown RBP16.22■□□□□ 0.19
CBX3-203ENST00000409747 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.22■□□□□ 0.19
CBX3-203ENST00000409747 PIEZO1Q92508 2521 aa16.22■□□□□ 0.19
CBX3-203ENST00000409747 CCDC169A6NNP5 214 aa16.22■□□□□ 0.19
CBX3-203ENST00000409747 TGM5O43548 720 aa16.22■□□□□ 0.19
CBX3-203ENST00000409747 KIF4AO95239 1232 aa16.22■□□□□ 0.19
CBX3-203ENST00000409747 PAPLNO95428 1278 aa16.22■□□□□ 0.19
CBX3-203ENST00000409747 MCM2P49736 904 aa16.22■□□□□ 0.19
CBX3-203ENST00000409747 EEF1DP3Q658K8 133 aa16.22■□□□□ 0.19
CBX3-203ENST00000409747 PALB2Q86YC2 1186 aa16.22■□□□□ 0.19
CBX3-203ENST00000409747 PRSS33Q8NF86 280 aa16.22■□□□□ 0.19
CBX3-203ENST00000409747 SMG7Q92540 1137 aaKnown RBP16.22■□□□□ 0.19
CBX3-203ENST00000409747 TTPALQ9BTX7 342 aa16.22■□□□□ 0.19
CBX3-203ENST00000409747 TOPORSQ9NS56 1045 aaPredicted RBP16.22■□□□□ 0.19
CBX3-203ENST00000409747 TNFSF13BQ9Y275 285 aa16.22■□□□□ 0.19
CBX3-203ENST00000409747 GDAQ9Y2T3 454 aa16.22■□□□□ 0.19
CBX3-203ENST00000409747 RBM19Q9Y4C8 960 aaKnown RBP16.22■□□□□ 0.19
CBX3-203ENST00000409747 CLUHO75153 1309 aa16.22■□□□□ 0.19
CBX3-203ENST00000409747 MTCL1Q9Y4B5 1905 aaKnown RBP16.21■□□□□ 0.19
CBX3-203ENST00000409747 H3BQV1 296 aa16.21■□□□□ 0.19
CBX3-203ENST00000409747 EDN1P05305 212 aa16.21■□□□□ 0.19
CBX3-203ENST00000409747 AVPR2P30518 371 aa16.21■□□□□ 0.19
CBX3-203ENST00000409747 YARSP54577 528 aaKnown RBP16.21■□□□□ 0.19
CBX3-203ENST00000409747 PEX3P56589 373 aa16.21■□□□□ 0.19
CBX3-203ENST00000409747 IER5LQ5T953 404 aa16.21■□□□□ 0.19
CBX3-203ENST00000409747 NT5DC1Q5TFE4 455 aa16.21■□□□□ 0.19
CBX3-203ENST00000409747 ALYREFQ86V81 257 aaKnown RBP16.21■□□□□ 0.19
CBX3-203ENST00000409747 HASPINQ8TF76 798 aa16.21■□□□□ 0.19
CBX3-203ENST00000409747 PIK3R5Q8WYR1 880 aa16.21■□□□□ 0.19
CBX3-203ENST00000409747 RABGGTAQ92696 567 aa16.21■□□□□ 0.19
CBX3-203ENST00000409747 UROC1Q96N76 676 aa16.21■□□□□ 0.19
CBX3-203ENST00000409747 PAAF1Q9BRP4 392 aa16.21■□□□□ 0.19
CBX3-203ENST00000409747 MRPL4Q9BYD3 311 aaKnown RBP16.21■□□□□ 0.19
CBX3-203ENST00000409747 NT5C3AQ9H0P0 336 aa16.21■□□□□ 0.19
CBX3-203ENST00000409747 TMEM134Q9H6X4 195 aa16.21■□□□□ 0.19
CBX3-203ENST00000409747 PIDD1Q9HB75 910 aa16.21■□□□□ 0.19
CBX3-203ENST00000409747 IGSF9Q9P2J2 1179 aa16.21■□□□□ 0.19
CBX3-203ENST00000409747 KCNG1Q9UIX4 513 aa16.21■□□□□ 0.19
CBX3-203ENST00000409747 USP20Q9Y2K6 914 aa16.21■□□□□ 0.19
CBX3-203ENST00000409747 PP2D1A8MPX8 630 aa16.2■□□□□ 0.18
CBX3-203ENST00000409747 E9PMD0 336 aa16.2■□□□□ 0.18
CBX3-203ENST00000409747 HIP1RO75146 1068 aa16.2■□□□□ 0.18
CBX3-203ENST00000409747 RFPL2O75678 378 aa16.2■□□□□ 0.18
CBX3-203ENST00000409747 NPTX2P47972 431 aa16.2■□□□□ 0.18
CBX3-203ENST00000409747 MRE11P49959 708 aa16.2■□□□□ 0.18
CBX3-203ENST00000409747 VCPP55072 806 aaKnown RBP16.2■□□□□ 0.18
CBX3-203ENST00000409747 ATP2C1P98194 919 aaPredicted RBP16.2■□□□□ 0.18
CBX3-203ENST00000409747 TDGQ13569 410 aa16.2■□□□□ 0.18
CBX3-203ENST00000409747 NAB2Q15742 525 aa16.2■□□□□ 0.18
CBX3-203ENST00000409747 RTP2Q5QGT7 225 aa16.2■□□□□ 0.18
CBX3-203ENST00000409747 FAM171A1Q5VUB5 890 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms