RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 CALM1P0DP23 149 aa11.38□□□□□ -0.59
NIF3L1-204ENST00000409357 CALM2P0DP24 149 aa11.38□□□□□ -0.59
NIF3L1-204ENST00000409357 CALM3P0DP25 149 aa11.38□□□□□ -0.59
NIF3L1-204ENST00000409357 RARGP13631 454 aa11.38□□□□□ -0.59
NIF3L1-204ENST00000409357 PSMD7P51665 324 aa11.38□□□□□ -0.59
NIF3L1-204ENST00000409357 SLC18A1P54219 525 aa11.38□□□□□ -0.59
NIF3L1-204ENST00000409357 AMPD3Q01432 767 aa11.38□□□□□ -0.59
NIF3L1-204ENST00000409357 AP1B1Q10567 949 aa11.38□□□□□ -0.59
NIF3L1-204ENST00000409357 AUHQ13825 339 aaKnown RBP11.38□□□□□ -0.59
NIF3L1-204ENST00000409357 GIT2Q14161 759 aa11.38□□□□□ -0.59
NIF3L1-204ENST00000409357 MAP7Q14244 749 aa11.38□□□□□ -0.59
NIF3L1-204ENST00000409357 ZNF174Q15697 407 aa11.38□□□□□ -0.59
NIF3L1-204ENST00000409357 IL17AQ16552 155 aa11.38□□□□□ -0.59
NIF3L1-204ENST00000409357 TMEM132AQ24JP5 1023 aa11.38□□□□□ -0.59
NIF3L1-204ENST00000409357 ZNF568Q3ZCX4 644 aa11.38□□□□□ -0.59
NIF3L1-204ENST00000409357 SYCP3Q8IZU3 236 aa11.38□□□□□ -0.59
NIF3L1-204ENST00000409357 METTL13Q8N6R0 699 aa11.38□□□□□ -0.59
NIF3L1-204ENST00000409357 ZNF398Q8TD17 642 aa11.38□□□□□ -0.59
NIF3L1-204ENST00000409357 STAMQ92783 540 aa11.38□□□□□ -0.59
NIF3L1-204ENST00000409357 OTUD5Q96G74 571 aa11.38□□□□□ -0.59
NIF3L1-204ENST00000409357 PTPN18Q99952 460 aa11.38□□□□□ -0.59
NIF3L1-204ENST00000409357 IDI2Q9BXS1 227 aa11.38□□□□□ -0.59
NIF3L1-204ENST00000409357 CARD9Q9H257 536 aa11.38□□□□□ -0.59
NIF3L1-204ENST00000409357 RNF41Q9H4P4 317 aaPredicted RBP11.38□□□□□ -0.59
NIF3L1-204ENST00000409357 TBCCD1Q9NVR7 557 aa11.38□□□□□ -0.59
NIF3L1-204ENST00000409357 LRP2BPQ9P2M1 347 aa11.38□□□□□ -0.59
NIF3L1-204ENST00000409357 PNMA3Q9UL41 463 aa11.38□□□□□ -0.59
NIF3L1-204ENST00000409357 SSX2IPQ9Y2D8 614 aa11.38□□□□□ -0.59
NIF3L1-204ENST00000409357 USH1CQ9Y6N9 552 aa11.38□□□□□ -0.59
NIF3L1-204ENST00000409357 TNRC18O15417 2968 aaPredicted RBP11.38□□□□□ -0.59
NIF3L1-204ENST00000409357 TCP11X1B4DZS4 312 aa11.37□□□□□ -0.59
NIF3L1-204ENST00000409357 PODXLO00592 558 aa11.37□□□□□ -0.59
NIF3L1-204ENST00000409357 MAPK13O15264 365 aa11.37□□□□□ -0.59
NIF3L1-204ENST00000409357 ATP6V1G1O75348 118 aa11.37□□□□□ -0.59
NIF3L1-204ENST00000409357 E2F6O75461 281 aa11.37□□□□□ -0.59
NIF3L1-204ENST00000409357 FXR2P51116 673 aaKnown RBP eCLIP11.37□□□□□ -0.59
NIF3L1-204ENST00000409357 POLGP54098 1239 aaPredicted RBP11.37□□□□□ -0.59
NIF3L1-204ENST00000409357 RNASELQ05823 741 aaKnown RBP11.37□□□□□ -0.59
NIF3L1-204ENST00000409357 MCL1Q07820 350 aa11.37□□□□□ -0.59
NIF3L1-204ENST00000409357 LIN52Q52LA3 116 aa11.37□□□□□ -0.59
NIF3L1-204ENST00000409357 KLC3Q6P597 504 aa11.37□□□□□ -0.59
NIF3L1-204ENST00000409357 TRMT10CQ7L0Y3 403 aaKnown RBP11.37□□□□□ -0.59
NIF3L1-204ENST00000409357 ZNF654Q8IZM8 581 aa11.37□□□□□ -0.59
NIF3L1-204ENST00000409357 ANKLE1Q8NAG6 615 aa11.37□□□□□ -0.59
NIF3L1-204ENST00000409357 ZBTB8BQ8NAP8 495 aaPredicted RBP11.37□□□□□ -0.59
NIF3L1-204ENST00000409357 PPFIBP2Q8ND30 876 aa11.37□□□□□ -0.59
NIF3L1-204ENST00000409357 ZNF653Q96CK0 615 aa11.37□□□□□ -0.59
NIF3L1-204ENST00000409357 SHISA4Q96DD7 197 aa11.37□□□□□ -0.59
NIF3L1-204ENST00000409357 HES6Q96HZ4 224 aa11.37□□□□□ -0.59
NIF3L1-204ENST00000409357 MS4A4AQ96JQ5 239 aa11.37□□□□□ -0.59
NIF3L1-204ENST00000409357 STRBPQ96SI9 672 aaKnown RBP11.37□□□□□ -0.59
NIF3L1-204ENST00000409357 MAF1Q9H063 256 aa11.37□□□□□ -0.59
NIF3L1-204ENST00000409357 AZI2Q9H6S1 392 aa11.37□□□□□ -0.59
NIF3L1-204ENST00000409357 FGFR1OP2Q9NVK5 253 aa11.37□□□□□ -0.59
NIF3L1-204ENST00000409357 MTRF1LQ9UGC7 380 aaKnown RBP11.37□□□□□ -0.59
NIF3L1-204ENST00000409357 RASAL2Q9UJF2 1139 aa11.37□□□□□ -0.59
NIF3L1-204ENST00000409357 NENFQ9UMX5 172 aa11.37□□□□□ -0.59
NIF3L1-204ENST00000409357 ATP8A1Q9Y2Q0 1164 aa11.37□□□□□ -0.59
NIF3L1-204ENST00000409357 PHIPQ8WWQ0 1821 aa11.37□□□□□ -0.59
NIF3L1-204ENST00000409357 PVALEFA0A1B0GWK0 134 aa11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 FAM196BA6NMK8 535 aa11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 RASGRF2O14827 1237 aa11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 EPHB6O15197 1021 aa11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 TLR2O60603 784 aa11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 ATP9AO75110 1047 aa11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 GM2AP17900 193 aa11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 GNAT2P19087 354 aa11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 MARK3P27448 753 aa11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 PTPN4P29074 926 aa11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 MARSP56192 900 aaKnown RBP11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 RAB15P59190 212 aa11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 IFI35P80217 286 aaPredicted RBP11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 SLC34A1Q06495 639 aa11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 SREBF2Q12772 1141 aa11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 ADRM1Q16186 407 aa11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 EARS2Q5JPH6 523 aaKnown RBP11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 INTS8Q75QN2 995 aaKnown RBP11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 EXOC3L1Q86VI1 746 aa11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 ECHDC2Q86YB7 292 aa11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 NME8Q8N427 588 aa11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 GUF1Q8N442 669 aaKnown RBP11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 ANKRD13CQ8N6S4 541 aa11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 PHC3Q8NDX5 983 aa11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 NKX2-3Q8TAU0 364 aa11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 SH3RF3Q8TEJ3 882 aaPredicted RBP11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 SLC7A6OSQ96CW6 309 aaPredicted RBP11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 KIF12Q96FN5 646 aa11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 HIC2Q96JB3 615 aa11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 CATSPER2Q96P56 530 aa11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 TSPAN18Q96SJ8 248 aa11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 TBC1D10AQ9BXI6 508 aa11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 DDX47Q9H0S4 455 aaKnown RBP11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 MMRN2Q9H8L6 949 aa11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 RIC8AQ9NPQ8 531 aa11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 STX18Q9P2W9 335 aaKnown RBP11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 AMACRQ9UHK6 382 aa11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 MAPK8IP1Q9UQF2 711 aa11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 ZNF148Q9UQR1 794 aa11.36□□□□□ -0.59
NIF3L1-204ENST00000409357 PTPRFP10586 1907 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms