RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 GYS1P13807 737 aa8.89□□□□□ -0.99
SNX13-201ENST00000409076 PRLRP16471 622 aa8.89□□□□□ -0.99
SNX13-201ENST00000409076 DRD4P21917 467 aa8.89□□□□□ -0.99
SNX13-201ENST00000409076 ECHS1P30084 290 aa8.89□□□□□ -0.99
SNX13-201ENST00000409076 PRELPP51888 382 aa8.89□□□□□ -0.99
SNX13-201ENST00000409076 PPP4CP60510 307 aa8.89□□□□□ -0.99
SNX13-201ENST00000409076 IGBP1P78318 339 aa8.89□□□□□ -0.99
SNX13-201ENST00000409076 SETDB1Q15047 1291 aa8.89□□□□□ -0.99
SNX13-201ENST00000409076 PPP4R3AQ6IN85 833 aa8.89□□□□□ -0.99
SNX13-201ENST00000409076 FMNL3Q8IVF7 1028 aa8.89□□□□□ -0.99
SNX13-201ENST00000409076 SCFD2Q8WU76 684 aa8.89□□□□□ -0.99
SNX13-201ENST00000409076 NT5C1BQ96P26 610 aa8.89□□□□□ -0.99
SNX13-201ENST00000409076 STK33Q9BYT3 514 aa8.89□□□□□ -0.99
SNX13-201ENST00000409076 KMT5AQ9NQR1 393 aa8.89□□□□□ -0.99
SNX13-201ENST00000409076 MYH14Q7Z406 1995 aaKnown RBP8.89□□□□□ -0.99
SNX13-201ENST00000409076 A0A1B0GUA9 196 aa8.89□□□□□ -0.99
SNX13-201ENST00000409076 F7P08709 466 aaPredicted RBP8.89□□□□□ -0.99
SNX13-201ENST00000409076 HNRNPH3P31942 346 aaKnown RBP8.89□□□□□ -0.99
SNX13-201ENST00000409076 ZC3H18Q86VM9 953 aaKnown RBP8.89□□□□□ -0.99
SNX13-201ENST00000409076 LARGE2Q8N3Y3 721 aa8.89□□□□□ -0.99
SNX13-201ENST00000409076 OGFOD1Q8N543 542 aa8.89□□□□□ -0.99
SNX13-201ENST00000409076 LRRC57Q8N9N7 239 aa8.89□□□□□ -0.99
SNX13-201ENST00000409076 ZBTB45Q96K62 511 aaPredicted RBP8.89□□□□□ -0.99
SNX13-201ENST00000409076 CALN1Q9BXU9 219 aa8.89□□□□□ -0.99
SNX13-201ENST00000409076 PABPC3Q9H361 631 aaKnown RBP8.89□□□□□ -0.99
SNX13-201ENST00000409076 ARHGEF10LQ9HCE6 1279 aa8.89□□□□□ -0.99
SNX13-201ENST00000409076 SIX2Q9NPC8 291 aa8.89□□□□□ -0.99
SNX13-201ENST00000409076 ZNF277Q9NRM2 450 aaPredicted RBP8.89□□□□□ -0.99
SNX13-201ENST00000409076 SIPA1L3O60292 1781 aaPredicted RBP8.89□□□□□ -0.99
SNX13-201ENST00000409076 MYH7BA7E2Y1 1941 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 ZBED4O75132 1171 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 ATP6V1G2O95670 118 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 GAS8O95995 478 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 KRT16P08779 473 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 COILP38432 576 aaPredicted RBP8.88□□□□□ -0.99
SNX13-201ENST00000409076 ELF3P78545 371 aaPredicted RBP8.88□□□□□ -0.99
SNX13-201ENST00000409076 RRP1BQ14684 758 aaKnown RBP8.88□□□□□ -0.99
SNX13-201ENST00000409076 FASTKD3Q14CZ7 662 aaKnown RBP8.88□□□□□ -0.99
SNX13-201ENST00000409076 APOBEC3HQ6NTF7 200 aaKnown RBP8.88□□□□□ -0.99
SNX13-201ENST00000409076 LDHDQ86WU2 507 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 XXYLT1Q8NBI6 393 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 MAML1Q92585 1016 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 HSPH1Q92598 858 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 SEMA4DQ92854 862 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 ZBTB10Q96DT7 871 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 RMDN2Q96LZ7 410 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 NACC1Q96RE7 527 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 FAM129AQ9BZQ8 928 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 YY1AP1Q9H869 796 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 ROBO1Q9Y6N7 1651 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 LAMB4A4D0S4 1761 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 PFASO15067 1338 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 CEP350Q5VT06 3117 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 TXNDC9O14530 226 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 KIAA0391O15091 583 aaKnown RBP8.88□□□□□ -0.99
SNX13-201ENST00000409076 PHF2O75151 1096 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 ADRB2P07550 413 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 SRGAP2CP0DJJ0 459 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 LIG4P49917 911 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 RAD23BP54727 409 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 YWHAGP61981 247 aaKnown RBP eCLIP8.88□□□□□ -0.99
SNX13-201ENST00000409076 RASA3Q14644 834 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 EFTUD2Q15029 972 aaKnown RBP eCLIP8.88□□□□□ -0.993e-6■■□□□ 13.2
SNX13-201ENST00000409076 CEP55Q53EZ4 464 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 WDR44Q5JSH3 913 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 SEPT12Q8IYM1 358 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 ACTRT1Q8TDG2 376 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 CFAP36Q96G28 342 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 ATXN7L3BQ96GX2 97 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 ZSWIM1Q9BR11 485 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 UBN1Q9NPG3 1134 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 C1orf112Q9NSG2 853 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 SUCLA2Q9P2R7 463 aaPredicted RBP8.88□□□□□ -0.99
SNX13-201ENST00000409076 SAT1P21673 171 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 ARHGEF16Q5VV41 709 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 SWSAP1Q6NVH7 229 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 EPM2AIP1Q7L775 607 aaPredicted RBP8.88□□□□□ -0.99
SNX13-201ENST00000409076 SLC13A5Q86YT5 568 aaPredicted RBP8.88□□□□□ -0.99
SNX13-201ENST00000409076 SULF1Q8IWU6 871 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 THNSL1Q8IYQ7 743 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 ZDHHC14Q8IZN3 488 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 SLC25A41Q8N5S1 370 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 EFCAB3Q8N7B9 438 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 SLC13A1Q9BZW2 595 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 SLITRK6Q9H5Y7 841 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 ACSS2Q9NR19 701 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 GABBR1Q9UBS5 961 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 IKBKGQ9Y6K9 419 aa8.88□□□□□ -0.99
SNX13-201ENST00000409076 CCDC160A6NGH7 325 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 RIPK2O43353 540 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 WEE2P0C1S8 567 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 TCF4P15884 667 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 TFAMQ00059 246 aaKnown RBP8.87□□□□□ -0.99
SNX13-201ENST00000409076 DLGAP5Q15398 846 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 SNRNP35Q16560 246 aaKnown RBP8.87□□□□□ -0.99
SNX13-201ENST00000409076 UGCGQ16739 394 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 EDRF1Q3B7T1 1238 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 ZNF720Q7Z2F6 126 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 SPATA21Q7Z572 469 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 EXOC3L1Q86VI1 746 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms