RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 C22orf23Q9BZE7 217 aa5.81□□□□□ -1.48
HMGB3P18-201ENST00000406327 UNKQ9C0B0 810 aaKnown RBP5.81□□□□□ -1.48
HMGB3P18-201ENST00000406327 PPCSQ9HAB8 311 aa5.81□□□□□ -1.48
HMGB3P18-201ENST00000406327 PTPRHQ9HD43 1115 aa5.81□□□□□ -1.48
HMGB3P18-201ENST00000406327 PNPLA8Q9NP80 782 aa5.81□□□□□ -1.48
HMGB3P18-201ENST00000406327 STARD7Q9NQZ5 370 aa5.81□□□□□ -1.48
HMGB3P18-201ENST00000406327 TRMT13Q9NUP7 481 aaKnown RBP5.81□□□□□ -1.48
HMGB3P18-201ENST00000406327 PNPOQ9NVS9 261 aa5.81□□□□□ -1.48
HMGB3P18-201ENST00000406327 OGDHLQ9ULD0 1010 aa5.81□□□□□ -1.48
HMGB3P18-201ENST00000406327 PAXBP1Q9Y5B6 917 aa5.81□□□□□ -1.48
HMGB3P18-201ENST00000406327 HMGB1P1B2RPK0 211 aaPredicted RBP5.8□□□□□ -1.48
HMGB3P18-201ENST00000406327 NPHP1O15259 732 aa5.8□□□□□ -1.48
HMGB3P18-201ENST00000406327 MTSS1O43312 755 aa5.8□□□□□ -1.48
HMGB3P18-201ENST00000406327 GPR32O75388 356 aa5.8□□□□□ -1.48
HMGB3P18-201ENST00000406327 ALDH1A2O94788 518 aa5.8□□□□□ -1.48
HMGB3P18-201ENST00000406327 TYRP14679 529 aa5.8□□□□□ -1.48
HMGB3P18-201ENST00000406327 HNRNPLP14866 589 aaKnown RBP eCLIP5.8□□□□□ -1.48
HMGB3P18-201ENST00000406327 NCKAP1LP55160 1127 aa5.8□□□□□ -1.48
HMGB3P18-201ENST00000406327 FBLN7Q53RD9 439 aa5.8□□□□□ -1.48
HMGB3P18-201ENST00000406327 PRR16Q569H4 304 aa5.8□□□□□ -1.48
HMGB3P18-201ENST00000406327 SWSAP1Q6NVH7 229 aa5.8□□□□□ -1.48
HMGB3P18-201ENST00000406327 ERAP2Q6P179 960 aa5.8□□□□□ -1.48
HMGB3P18-201ENST00000406327 ABHD15Q6UXT9 468 aa5.8□□□□□ -1.48
HMGB3P18-201ENST00000406327 CLEC14AQ86T13 490 aa5.8□□□□□ -1.48
HMGB3P18-201ENST00000406327 SAPCD2Q86UD0 394 aa5.8□□□□□ -1.48
HMGB3P18-201ENST00000406327 FAM9AQ8IZU1 332 aaPredicted RBP5.8□□□□□ -1.48
HMGB3P18-201ENST00000406327 CASKIN2Q8WXE0 1202 aa5.8□□□□□ -1.48
HMGB3P18-201ENST00000406327 GCDHQ92947 438 aaPredicted RBP5.8□□□□□ -1.48
HMGB3P18-201ENST00000406327 MRGPRX4Q96LA9 322 aa5.8□□□□□ -1.48
HMGB3P18-201ENST00000406327 RIPOR3Q96MK2 946 aa5.8□□□□□ -1.48
HMGB3P18-201ENST00000406327 APOL5Q9BWW9 433 aa5.8□□□□□ -1.48
HMGB3P18-201ENST00000406327 SENP6Q9GZR1 1112 aaPredicted RBP5.8□□□□□ -1.48
HMGB3P18-201ENST00000406327 UBA5Q9GZZ9 404 aa5.8□□□□□ -1.48
HMGB3P18-201ENST00000406327 NSUN3Q9H649 340 aaKnown RBP5.8□□□□□ -1.48
HMGB3P18-201ENST00000406327 ARMT1Q9H993 441 aa5.8□□□□□ -1.48
HMGB3P18-201ENST00000406327 L2HGDHQ9H9P8 463 aa5.8□□□□□ -1.48
HMGB3P18-201ENST00000406327 RSAD1Q9HA92 442 aa5.8□□□□□ -1.48
HMGB3P18-201ENST00000406327 ZNF287Q9HBT7 754 aa5.8□□□□□ -1.48
HMGB3P18-201ENST00000406327 TLR9Q9NR96 1032 aa5.8□□□□□ -1.48
HMGB3P18-201ENST00000406327 ABCF2Q9UG63 623 aa5.8□□□□□ -1.48
HMGB3P18-201ENST00000406327 MAGEL2Q9UJ55 1249 aa5.8□□□□□ -1.48
HMGB3P18-201ENST00000406327 CDC42EP3Q9UKI2 254 aa5.8□□□□□ -1.48
HMGB3P18-201ENST00000406327 PMF1-BGLAPU3KQ54 211 aa5.8□□□□□ -1.48
HMGB3P18-201ENST00000406327 MYBBP1AQ9BQG0 1328 aaKnown RBP5.79□□□□□ -1.48
HMGB3P18-201ENST00000406327 IL2RBP14784 551 aa5.79□□□□□ -1.48
HMGB3P18-201ENST00000406327 SREBF1P36956 1147 aa5.79□□□□□ -1.48
HMGB3P18-201ENST00000406327 SLC6A9P48067 706 aa5.79□□□□□ -1.48
HMGB3P18-201ENST00000406327 TRAPPC10P48553 1259 aa5.79□□□□□ -1.48
HMGB3P18-201ENST00000406327 PRIM2P49643 509 aa5.79□□□□□ -1.48
HMGB3P18-201ENST00000406327 STAT5BP51692 787 aa5.79□□□□□ -1.48
HMGB3P18-201ENST00000406327 CASP5P51878 434 aa5.79□□□□□ -1.48
HMGB3P18-201ENST00000406327 TLE1Q04724 770 aa5.79□□□□□ -1.48
HMGB3P18-201ENST00000406327 TARDBPQ13148 414 aaKnown RBP eCLIP5.79□□□□□ -1.48
HMGB3P18-201ENST00000406327 PLS1Q14651 629 aa5.79□□□□□ -1.48
HMGB3P18-201ENST00000406327 KHDC1Q4VXA5 237 aaKnown RBP5.79□□□□□ -1.48
HMGB3P18-201ENST00000406327 TRIM68Q6AZZ1 485 aa5.79□□□□□ -1.48
HMGB3P18-201ENST00000406327 STK32CQ86UX6 486 aa5.79□□□□□ -1.48
HMGB3P18-201ENST00000406327 IGDCC3Q8IVU1 814 aa5.79□□□□□ -1.48
HMGB3P18-201ENST00000406327 ANKRD42Q8N9B4 389 aa5.79□□□□□ -1.48
HMGB3P18-201ENST00000406327 PIK3C3Q8NEB9 887 aa5.79□□□□□ -1.48
HMGB3P18-201ENST00000406327 CCHCR1Q8TD31 782 aa5.79□□□□□ -1.48
HMGB3P18-201ENST00000406327 ANKS1AQ92625 1134 aa5.79□□□□□ -1.48
HMGB3P18-201ENST00000406327 SLC7A6OSQ96CW6 309 aaPredicted RBP5.79□□□□□ -1.48
HMGB3P18-201ENST00000406327 PDCD2LQ9BRP1 358 aa5.79□□□□□ -1.48
HMGB3P18-201ENST00000406327 ZMAT3Q9HA38 289 aaKnown RBP5.79□□□□□ -1.48
HMGB3P18-201ENST00000406327 PIH1D1Q9NWS0 290 aaKnown RBP5.79□□□□□ -1.48
HMGB3P18-201ENST00000406327 MOCS1Q9NZB8 636 aa5.79□□□□□ -1.48
HMGB3P18-201ENST00000406327 GPRC5DQ9NZD1 345 aa5.79□□□□□ -1.48
HMGB3P18-201ENST00000406327 TRPS1Q9UHF7 1281 aa5.79□□□□□ -1.48
HMGB3P18-201ENST00000406327 PCDHA3Q9Y5H8 950 aa5.79□□□□□ -1.48
HMGB3P18-201ENST00000406327 RB1CC1Q8TDY2 1594 aa5.79□□□□□ -1.48
HMGB3P18-201ENST00000406327 KLRG2A4D1S0 409 aaPredicted RBP5.78□□□□□ -1.48
HMGB3P18-201ENST00000406327 COL6A1P12109 1028 aa5.78□□□□□ -1.48
HMGB3P18-201ENST00000406327 SYN1P17600 705 aa5.78□□□□□ -1.48
HMGB3P18-201ENST00000406327 DDCP20711 480 aa5.78□□□□□ -1.48
HMGB3P18-201ENST00000406327 MALP21145 153 aa5.78□□□□□ -1.48
HMGB3P18-201ENST00000406327 RPL13P26373 211 aaKnown RBP5.78□□□□□ -1.48
HMGB3P18-201ENST00000406327 SLC7A1P30825 629 aa5.78□□□□□ -1.48
HMGB3P18-201ENST00000406327 IL13P35225 146 aa5.78□□□□□ -1.48
HMGB3P18-201ENST00000406327 PIK3CBP42338 1070 aa5.78□□□□□ -1.48
HMGB3P18-201ENST00000406327 KIR2DL3P43628 341 aa5.78□□□□□ -1.48
HMGB3P18-201ENST00000406327 DUSP2Q05923 314 aa5.78□□□□□ -1.48
HMGB3P18-201ENST00000406327 TMEM95Q3KNT9 176 aa5.78□□□□□ -1.48
HMGB3P18-201ENST00000406327 ZMAT1Q5H9K5 638 aa5.78□□□□□ -1.48
HMGB3P18-201ENST00000406327 IZUMO3Q5VZ72 239 aa5.78□□□□□ -1.48
HMGB3P18-201ENST00000406327 Q6ZVL8 140 aa5.78□□□□□ -1.48
HMGB3P18-201ENST00000406327 SMAP1Q8IYB5 467 aaPredicted RBP5.78□□□□□ -1.48
HMGB3P18-201ENST00000406327 PLA2G15Q8NCC3 412 aa5.78□□□□□ -1.48
HMGB3P18-201ENST00000406327 PLBD2Q8NHP8 589 aa5.78□□□□□ -1.48
HMGB3P18-201ENST00000406327 IL31RAQ8NI17 732 aa5.78□□□□□ -1.48
HMGB3P18-201ENST00000406327 IFI44Q8TCB0 444 aa5.78□□□□□ -1.48
HMGB3P18-201ENST00000406327 DIRC2Q96SL1 478 aa5.78□□□□□ -1.48
HMGB3P18-201ENST00000406327 COLEC11Q9BWP8 271 aa5.78□□□□□ -1.48
HMGB3P18-201ENST00000406327 CARD11Q9BXL7 1154 aa5.78□□□□□ -1.48
HMGB3P18-201ENST00000406327 MCOLN1Q9GZU1 580 aa5.78□□□□□ -1.48
HMGB3P18-201ENST00000406327 CERS4Q9HA82 394 aa5.78□□□□□ -1.48
HMGB3P18-201ENST00000406327 JADE2Q9NQC1 790 aa5.78□□□□□ -1.48
HMGB3P18-201ENST00000406327 SIDT1Q9NXL6 827 aaKnown RBP5.78□□□□□ -1.48
HMGB3P18-201ENST00000406327 CORO2BQ9UQ03 480 aa5.78□□□□□ -1.48
HMGB3P18-201ENST00000406327 CECR2Q9BXF3 1484 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms