RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 TRAF3IP3Q9Y228 551 aa14.13□□□□□ -0.15
SNED1-205ENST00000405547 SNAP25P60880 206 aa14.13□□□□□ -0.15
SNED1-205ENST00000405547 C12orf60Q5U649 245 aa14.13□□□□□ -0.15
SNED1-205ENST00000405547 ZNF710Q8N1W2 664 aa14.13□□□□□ -0.15
SNED1-205ENST00000405547 DTNBP1Q96EV8 351 aa14.13□□□□□ -0.15
SNED1-205ENST00000405547 RBM15Q96T37 977 aaKnown RBP eCLIP14.13□□□□□ -0.15
SNED1-205ENST00000405547 C2orf40Q9H1Z8 148 aa14.13□□□□□ -0.15
SNED1-205ENST00000405547 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.13□□□□□ -0.15
SNED1-205ENST00000405547 PHF20L1A8MW92 1017 aa14.12□□□□□ -0.15
SNED1-205ENST00000405547 PRLRP16471 622 aa14.12□□□□□ -0.15
SNED1-205ENST00000405547 TYK2P29597 1187 aa14.12□□□□□ -0.15
SNED1-205ENST00000405547 CRKP46108 304 aa14.12□□□□□ -0.15
SNED1-205ENST00000405547 CARSP49589 748 aaKnown RBP14.12□□□□□ -0.15
SNED1-205ENST00000405547 PSMC5P62195 406 aa14.12□□□□□ -0.15
SNED1-205ENST00000405547 GPD1LQ8N335 351 aa14.12□□□□□ -0.15
SNED1-205ENST00000405547 MRPL4Q9BYD3 311 aaKnown RBP14.12□□□□□ -0.15
SNED1-205ENST00000405547 UBN1Q9NPG3 1134 aa14.12□□□□□ -0.15
SNED1-205ENST00000405547 RBAKQ9NYW8 714 aaPredicted RBP14.12□□□□□ -0.15
SNED1-205ENST00000405547 SNX5Q9Y5X3 404 aa14.12□□□□□ -0.15
SNED1-205ENST00000405547 ZBBXA8MT70 800 aa14.12□□□□□ -0.15
SNED1-205ENST00000405547 GPC3P51654 580 aa14.12□□□□□ -0.15
SNED1-205ENST00000405547 ZNF568Q3ZCX4 644 aa14.12□□□□□ -0.15
SNED1-205ENST00000405547 ABI1Q8IZP0 508 aa14.12□□□□□ -0.15
SNED1-205ENST00000405547 COL15A1P39059 1388 aa14.12□□□□□ -0.15
SNED1-205ENST00000405547 CCDC195A0A1B0GUA6 201 aa14.12□□□□□ -0.15
SNED1-205ENST00000405547 STK4Q13043 487 aa14.12□□□□□ -0.15
SNED1-205ENST00000405547 BFARQ9NZS9 450 aa14.12□□□□□ -0.15
SNED1-205ENST00000405547 PSMC3IPQ9P2W1 217 aaPredicted RBP14.12□□□□□ -0.15
SNED1-205ENST00000405547 WARS2Q9UGM6 360 aaKnown RBP14.12□□□□□ -0.15
SNED1-205ENST00000405547 F5H6K3 240 aa14.12□□□□□ -0.15
SNED1-205ENST00000405547 KLRC3Q07444 240 aa14.12□□□□□ -0.15
SNED1-205ENST00000405547 TOPORSQ9NS56 1045 aaPredicted RBP14.12□□□□□ -0.15
SNED1-205ENST00000405547 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.12□□□□□ -0.15
SNED1-205ENST00000405547 H3BRJ5 948 aa14.12□□□□□ -0.15
SNED1-205ENST00000405547 E2F6O75461 281 aa14.12□□□□□ -0.15
SNED1-205ENST00000405547 PLA2G4AP47712 749 aa14.12□□□□□ -0.15
SNED1-205ENST00000405547 RWDD4Q6NW29 188 aaKnown RBP14.12□□□□□ -0.15
SNED1-205ENST00000405547 LCA5Q86VQ0 697 aa14.12□□□□□ -0.15
SNED1-205ENST00000405547 CDKL3Q8IVW4 592 aaPredicted RBP14.12□□□□□ -0.15
SNED1-205ENST00000405547 RANBP17Q9H2T7 1088 aaKnown RBP14.12□□□□□ -0.15
SNED1-205ENST00000405547 CYP4F11Q9HBI6 524 aa14.12□□□□□ -0.15
SNED1-205ENST00000405547 NPHS2Q9NP85 383 aa14.12□□□□□ -0.15
SNED1-205ENST00000405547 PLAGL2Q9UPG8 496 aa14.12□□□□□ -0.15
SNED1-205ENST00000405547 MARK3P27448 753 aa14.12□□□□□ -0.15
SNED1-205ENST00000405547 STAT3P40763 770 aa14.12□□□□□ -0.15
SNED1-205ENST00000405547 KIAA0391O15091 583 aaKnown RBP14.12□□□□□ -0.15
SNED1-205ENST00000405547 HDAC4P56524 1084 aa14.12□□□□□ -0.15
SNED1-205ENST00000405547 PHKA2P46019 1235 aa14.11□□□□□ -0.15
SNED1-205ENST00000405547 SBK1Q52WX2 424 aa14.11□□□□□ -0.15
SNED1-205ENST00000405547 SLC30A9Q6PML9 568 aa14.11□□□□□ -0.15
SNED1-205ENST00000405547 HPS3Q969F9 1004 aa14.11□□□□□ -0.15
SNED1-205ENST00000405547 AP5M1Q9H0R1 490 aa14.11□□□□□ -0.15
SNED1-205ENST00000405547 SCHIP1Q9P0W5 487 aaPredicted RBP14.11□□□□□ -0.15
SNED1-205ENST00000405547 MAN1A2O60476 641 aa14.11□□□□□ -0.15
SNED1-205ENST00000405547 AARSP49588 968 aaKnown RBP eCLIP14.11□□□□□ -0.15
SNED1-205ENST00000405547 PIGHQ14442 188 aaPredicted RBP14.11□□□□□ -0.15
SNED1-205ENST00000405547 STXBP2Q15833 593 aa14.11□□□□□ -0.15
SNED1-205ENST00000405547 HAUS6Q7Z4H7 955 aa14.11□□□□□ -0.15
SNED1-205ENST00000405547 PSPC1Q8WXF1 523 aaKnown RBP14.11□□□□□ -0.15
SNED1-205ENST00000405547 NARFQ9UHQ1 456 aa14.11□□□□□ -0.15
SNED1-205ENST00000405547 FHOD1Q9Y613 1164 aa14.11□□□□□ -0.15
SNED1-205ENST00000405547 PPP1R3GB7ZBB8 358 aa14.11□□□□□ -0.15
SNED1-205ENST00000405547 RABGAP1LQ5R372 815 aa14.11□□□□□ -0.15
SNED1-205ENST00000405547 CEP55Q53EZ4 464 aa14.11□□□□□ -0.15
SNED1-205ENST00000405547 PCSK1NQ9UHG2 260 aa14.11□□□□□ -0.15
SNED1-205ENST00000405547 STAP1Q9ULZ2 295 aa14.11□□□□□ -0.15
SNED1-205ENST00000405547 MYO3BQ8WXR4 1341 aa14.11□□□□□ -0.15
SNED1-205ENST00000405547 ZNF335Q9H4Z2 1342 aaPredicted RBP14.11□□□□□ -0.15
SNED1-205ENST00000405547 MRPS35P82673 323 aaKnown RBP14.11□□□□□ -0.15
SNED1-205ENST00000405547 DPY19L2Q6NUT2 758 aa14.11□□□□□ -0.15
SNED1-205ENST00000405547 KDM7AQ6ZMT4 941 aa14.11□□□□□ -0.15
SNED1-205ENST00000405547 EML4Q9HC35 981 aaKnown RBP14.11□□□□□ -0.15
SNED1-205ENST00000405547 PI4K2BG5E9Z4 385 aa14.11□□□□□ -0.15
SNED1-205ENST00000405547 P3H1Q32P28 736 aa14.11□□□□□ -0.15
SNED1-205ENST00000405547 DAB2IPQ5VWQ8 1189 aa14.11□□□□□ -0.15
SNED1-205ENST00000405547 FRA10AC1Q70Z53 315 aa14.11□□□□□ -0.15
SNED1-205ENST00000405547 CARD9Q9H257 536 aa14.11□□□□□ -0.15
SNED1-205ENST00000405547 DBR1Q9UK59 544 aaKnown RBP14.11□□□□□ -0.15
SNED1-205ENST00000405547 MYMKA6NI61 221 aa14.1□□□□□ -0.15
SNED1-205ENST00000405547 CDH6P55285 790 aa14.1□□□□□ -0.15
SNED1-205ENST00000405547 EIF3EP60228 445 aaKnown RBP14.1□□□□□ -0.15
SNED1-205ENST00000405547 BIRC2Q13490 618 aa14.1□□□□□ -0.15
SNED1-205ENST00000405547 MED21Q13503 144 aa14.1□□□□□ -0.15
SNED1-205ENST00000405547 PTGISQ16647 500 aa14.1□□□□□ -0.15
SNED1-205ENST00000405547 ITPRIPL1Q6GPH6 555 aa14.1□□□□□ -0.15
SNED1-205ENST00000405547 MIGA2Q7L4E1 593 aa14.1□□□□□ -0.15
SNED1-205ENST00000405547 KCNB2Q92953 911 aa14.1□□□□□ -0.15
SNED1-205ENST00000405547 AGO2Q9UKV8 859 aaKnown RBP14.1□□□□□ -0.15
SNED1-205ENST00000405547 ARHGAP26Q9UNA1 814 aa14.1□□□□□ -0.15
SNED1-205ENST00000405547 PPME1Q9Y570 386 aa14.1□□□□□ -0.15
SNED1-205ENST00000405547 LOC102724159A0A0B4J2E5 919 aa14.1□□□□□ -0.15
SNED1-205ENST00000405547 SPDYE2BA6NHP3 402 aa14.1□□□□□ -0.15
SNED1-205ENST00000405547 AP3B1O00203 1094 aa14.1□□□□□ -0.15
SNED1-205ENST00000405547 TBX3O15119 743 aa14.1□□□□□ -0.15
SNED1-205ENST00000405547 CYP26A1O43174 497 aa14.1□□□□□ -0.15
SNED1-205ENST00000405547 SPDYE6P0CI01 402 aa14.1□□□□□ -0.15
SNED1-205ENST00000405547 PWP2Q15269 919 aaKnown RBP14.1□□□□□ -0.15
SNED1-205ENST00000405547 USP49Q70CQ1 688 aa14.1□□□□□ -0.15
SNED1-205ENST00000405547 THNSL1Q8IYQ7 743 aa14.1□□□□□ -0.15
SNED1-205ENST00000405547 NSUN4Q96CB9 384 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms