RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-208ENST00000403461 CDK5RAP2Q96SN8 1893 aa7.89□□□□□ -1.15
CEACAM1-208ENST00000403461 EYSQ5T1H1 3165 aa7.89□□□□□ -1.15
CEACAM1-208ENST00000403461 LAMA2P24043 3122 aaKnown RBP7.89□□□□□ -1.15
CEACAM1-208ENST00000403461 MUC3AQ02505 3323 aa7.88□□□□□ -1.15
CEACAM1-208ENST00000403461 M0R2C6 588 aa7.88□□□□□ -1.15
CEACAM1-208ENST00000403461 RFXAPO00287 272 aa7.88□□□□□ -1.15
CEACAM1-208ENST00000403461 SMAD7O15105 426 aaKnown RBP7.88□□□□□ -1.15
CEACAM1-208ENST00000403461 PAX4O43316 350 aa7.88□□□□□ -1.15
CEACAM1-208ENST00000403461 RANBP6O60518 1105 aaKnown RBP7.88□□□□□ -1.15
CEACAM1-208ENST00000403461 EFCAB14O75071 495 aa7.88□□□□□ -1.15
CEACAM1-208ENST00000403461 CBX7O95931 251 aa7.88□□□□□ -1.15
CEACAM1-208ENST00000403461 CEACAM5P06731 702 aa7.88□□□□□ -1.15
CEACAM1-208ENST00000403461 IQCF3P0C7M6 154 aa7.88□□□□□ -1.15
CEACAM1-208ENST00000403461 CALML3P27482 149 aa7.88□□□□□ -1.15
CEACAM1-208ENST00000403461 RNF4P78317 190 aa7.88□□□□□ -1.15
CEACAM1-208ENST00000403461 TAP1Q03518 808 aa7.88□□□□□ -1.15
CEACAM1-208ENST00000403461 BAATQ14032 418 aaPredicted RBP7.88□□□□□ -1.15
CEACAM1-208ENST00000403461 PPP2R5EQ16537 467 aa7.88□□□□□ -1.15
CEACAM1-208ENST00000403461 MUM1L1Q5H9M0 696 aa7.88□□□□□ -1.15
CEACAM1-208ENST00000403461 RNF207Q6ZRF8 634 aa7.88□□□□□ -1.15
CEACAM1-208ENST00000403461 MFSD4AQ8N468 514 aa7.88□□□□□ -1.15
CEACAM1-208ENST00000403461 NETO1Q8TDF5 533 aa7.88□□□□□ -1.15
CEACAM1-208ENST00000403461 AFAP1L1Q8TED9 768 aa7.88□□□□□ -1.15
CEACAM1-208ENST00000403461 FSD1Q9BTV5 496 aa7.88□□□□□ -1.15
CEACAM1-208ENST00000403461 LMCD1Q9NZU5 365 aa7.88□□□□□ -1.15
CEACAM1-208ENST00000403461 SUCOQ9UBS9 1254 aaKnown RBP7.88□□□□□ -1.15
CEACAM1-208ENST00000403461 TTC41PQ6P2S7 1318 aa7.87□□□□□ -1.15
CEACAM1-208ENST00000403461 FAM86C2PA6NEL3 165 aa7.87□□□□□ -1.15
CEACAM1-208ENST00000403461 PRR33A8MZF0 331 aa7.87□□□□□ -1.15
CEACAM1-208ENST00000403461 SMARCA5O60264 1052 aaPredicted RBP7.87□□□□□ -1.15
CEACAM1-208ENST00000403461 TXNP10599 105 aaKnown RBP7.87□□□□□ -1.15
CEACAM1-208ENST00000403461 PTGS1P23219 599 aa7.87□□□□□ -1.15
CEACAM1-208ENST00000403461 SNAP25P60880 206 aa7.87□□□□□ -1.15
CEACAM1-208ENST00000403461 GRB10Q13322 594 aa7.87□□□□□ -1.15
CEACAM1-208ENST00000403461 PTGISQ16647 500 aa7.87□□□□□ -1.15
CEACAM1-208ENST00000403461 IFI16Q16666 785 aaKnown RBP7.87□□□□□ -1.15
CEACAM1-208ENST00000403461 MSMPQ1L6U9 139 aa7.87□□□□□ -1.15
CEACAM1-208ENST00000403461 SYDE2Q5VT97 1194 aa7.87□□□□□ -1.15
CEACAM1-208ENST00000403461 PLD6Q8N2A8 252 aaKnown RBP7.87□□□□□ -1.15
CEACAM1-208ENST00000403461 DNERQ8NFT8 737 aa7.87□□□□□ -1.15
CEACAM1-208ENST00000403461 TNKS2Q9H2K2 1166 aa7.87□□□□□ -1.15
CEACAM1-208ENST00000403461 RANBP17Q9H2T7 1088 aaKnown RBP7.87□□□□□ -1.15
CEACAM1-208ENST00000403461 EPHX3Q9H6B9 360 aa7.87□□□□□ -1.15
CEACAM1-208ENST00000403461 TOMM22Q9NS69 142 aa7.87□□□□□ -1.15
CEACAM1-208ENST00000403461 KCNH3Q9ULD8 1083 aa7.87□□□□□ -1.15
CEACAM1-208ENST00000403461 PLAGL2Q9UPG8 496 aa7.87□□□□□ -1.15
CEACAM1-208ENST00000403461 CAPN6Q9Y6Q1 641 aa7.87□□□□□ -1.15
CEACAM1-208ENST00000403461 DDX49Q9Y6V7 483 aaKnown RBP7.87□□□□□ -1.15
CEACAM1-208ENST00000403461 DNAH12Q6ZR08 3092 aa7.87□□□□□ -1.15
CEACAM1-208ENST00000403461 PRUNE2Q8WUY3 3088 aa7.86□□□□□ -1.15
CEACAM1-208ENST00000403461 EPOPA6NHQ4 379 aa7.86□□□□□ -1.15
CEACAM1-208ENST00000403461 NFIBO00712 420 aa7.86□□□□□ -1.15
CEACAM1-208ENST00000403461 STK10O94804 968 aaKnown RBP7.86□□□□□ -1.15
CEACAM1-208ENST00000403461 TOP1P11387 765 aaKnown RBP7.86□□□□□ -1.15
CEACAM1-208ENST00000403461 ALADP13716 330 aa7.86□□□□□ -1.15
CEACAM1-208ENST00000403461 ITIH2P19823 946 aa7.86□□□□□ -1.15
CEACAM1-208ENST00000403461 CASTP20810 708 aaKnown RBP7.86□□□□□ -1.15
CEACAM1-208ENST00000403461 CD97P48960 835 aa7.86□□□□□ -1.15
CEACAM1-208ENST00000403461 PMS1P54277 932 aaKnown RBP7.86□□□□□ -1.15
CEACAM1-208ENST00000403461 WDR5P61964 334 aaKnown RBP7.86□□□□□ -1.15
CEACAM1-208ENST00000403461 PTPROQ16827 1216 aa7.86□□□□□ -1.15
CEACAM1-208ENST00000403461 NKPD1Q17RQ9 610 aa7.86□□□□□ -1.15
CEACAM1-208ENST00000403461 BBS9Q3SYG4 887 aa7.86□□□□□ -1.15
CEACAM1-208ENST00000403461 TSHZ3Q63HK5 1081 aa7.86□□□□□ -1.15
CEACAM1-208ENST00000403461 KRT40Q6A162 431 aa7.86□□□□□ -1.15
CEACAM1-208ENST00000403461 CNKSR3Q6P9H4 555 aa7.86□□□□□ -1.15
CEACAM1-208ENST00000403461 LRRC8DQ7L1W4 858 aa7.86□□□□□ -1.15
CEACAM1-208ENST00000403461 SPACA3Q8IXA5 215 aa7.86□□□□□ -1.15
CEACAM1-208ENST00000403461 C7orf31Q8N865 590 aa7.86□□□□□ -1.15
CEACAM1-208ENST00000403461 PIWIL2Q8TC59 973 aaKnown RBP7.86□□□□□ -1.15
CEACAM1-208ENST00000403461 Q96M66 194 aa7.86□□□□□ -1.15
CEACAM1-208ENST00000403461 TGS1Q96RS0 853 aaKnown RBP7.86□□□□□ -1.15
CEACAM1-208ENST00000403461 RAD9AQ99638 391 aa7.86□□□□□ -1.15
CEACAM1-208ENST00000403461 KATNAL1Q9BW62 490 aa7.86□□□□□ -1.15
CEACAM1-208ENST00000403461 CTNNA3Q9UI47 895 aa7.86□□□□□ -1.15
CEACAM1-208ENST00000403461 FAM50BQ9Y247 325 aa7.86□□□□□ -1.15
CEACAM1-208ENST00000403461 SNX11Q9Y5W9 270 aa7.86□□□□□ -1.15
CEACAM1-208ENST00000403461 WDR19Q8NEZ3 1342 aa7.85□□□□□ -1.15
CEACAM1-208ENST00000403461 ABHD14A-ACY1A0A1B0GW23 586 aa7.85□□□□□ -1.15
CEACAM1-208ENST00000403461 EIF5BO60841 1220 aaKnown RBP7.85□□□□□ -1.15
CEACAM1-208ENST00000403461 MED26O95402 600 aa7.85□□□□□ -1.15
CEACAM1-208ENST00000403461 GH1P01241 217 aa7.85□□□□□ -1.15
CEACAM1-208ENST00000403461 SLC16A2P36021 539 aa7.85□□□□□ -1.15
CEACAM1-208ENST00000403461 IRAK1P51617 712 aa7.85□□□□□ -1.15
CEACAM1-208ENST00000403461 RPS6P62753 249 aaKnown RBP7.85□□□□□ -1.15
CEACAM1-208ENST00000403461 TNK2Q07912 1038 aa7.85□□□□□ -1.15
CEACAM1-208ENST00000403461 DGKDQ16760 1214 aa7.85□□□□□ -1.15
CEACAM1-208ENST00000403461 BTNL9Q6UXG8 535 aa7.85□□□□□ -1.15
CEACAM1-208ENST00000403461 SLC30A10Q6XR72 485 aa7.85□□□□□ -1.15
CEACAM1-208ENST00000403461 KRTAP19-1Q8IUB9 90 aa7.85□□□□□ -1.15
CEACAM1-208ENST00000403461 DTWD2Q8NBA8 298 aa7.85□□□□□ -1.15
CEACAM1-208ENST00000403461 GDPD5Q8WTR4 605 aa7.85□□□□□ -1.15
CEACAM1-208ENST00000403461 MAF1Q9H063 256 aa7.85□□□□□ -1.15
CEACAM1-208ENST00000403461 UBE2ZQ9H832 354 aaPredicted RBP7.85□□□□□ -1.15
CEACAM1-208ENST00000403461 ACTR10Q9NZ32 417 aa7.85□□□□□ -1.15
CEACAM1-208ENST00000403461 MTUS1Q9ULD2 1270 aa7.85□□□□□ -1.15
CEACAM1-208ENST00000403461 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.85□□□□□ -1.15
CEACAM1-208ENST00000403461 FRMPD2Q68DX3 1309 aaPredicted RBP7.84□□□□□ -1.15
CEACAM1-208ENST00000403461 EMSYQ7Z589 1322 aa7.84□□□□□ -1.15
CEACAM1-208ENST00000403461 KIAA1324LA8MWY0 1029 aaPredicted RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms