RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 BRIP1Q9BX63 1249 aa7.63□□□□□ -1.19
CSNK2A1-204ENST00000400227 TMX1Q9H3N1 280 aa7.63□□□□□ -1.19
CSNK2A1-204ENST00000400227 INTS13Q9NVM9 706 aa7.63□□□□□ -1.19
CSNK2A1-204ENST00000400227 GNL3LQ9NVN8 582 aaKnown RBP7.63□□□□□ -1.19
CSNK2A1-204ENST00000400227 TRMT1Q9NXH9 659 aaKnown RBP7.63□□□□□ -1.19
CSNK2A1-204ENST00000400227 TMEFF2Q9UIK5 374 aaPredicted RBP7.63□□□□□ -1.19
CSNK2A1-204ENST00000400227 SRPRBQ9Y5M8 271 aaKnown RBP7.63□□□□□ -1.19
CSNK2A1-204ENST00000400227 TNKSO95271 1327 aa7.63□□□□□ -1.19
CSNK2A1-204ENST00000400227 SPATA31A5Q5VU36 1347 aa7.63□□□□□ -1.19
CSNK2A1-204ENST00000400227 SPATA31A7Q8IWB4 1347 aa7.63□□□□□ -1.19
CSNK2A1-204ENST00000400227 SBF2Q86WG5 1849 aa7.63□□□□□ -1.19
CSNK2A1-204ENST00000400227 ERICH2A1L162 156 aa7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 OR14I1A6ND48 311 aa7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 SMIM22K7EJ46 135 aa7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 PRODHO43272 600 aa7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 PRPF3O43395 683 aaKnown RBP7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 NPHS1O60500 1241 aa7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 PABPC1P11940 636 aaKnown RBP7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 SFPQP23246 707 aaKnown RBP eCLIP7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 UBASH3AP57075 661 aa7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 DYNLL1P63167 89 aaKnown RBP7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 TBX2Q13207 712 aaPredicted RBP7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 KCNAB2Q13303 367 aa7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 MORC3Q14149 939 aa7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 SPECC1Q5M775 1068 aa7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 SLC10A5Q5PT55 438 aa7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 YOD1Q5VVQ6 348 aaPredicted RBP7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 OGFOD2Q6N063 350 aa7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 ANKRD18AQ8IVF6 992 aa7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 PPIL6Q8IXY8 311 aa7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 ENAHQ8N8S7 591 aaPredicted RBP7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 ZNF384Q8TF68 577 aa7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 SDR42E1Q8WUS8 393 aa7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 ESR2Q92731 530 aa7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 DIO2Q92813 273 aa7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 NOL10Q9BSC4 688 aaKnown RBP7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 RNF26Q9BY78 433 aaPredicted RBP7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 EPB41L4BQ9H329 900 aa7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 ZNF552Q9H707 407 aaPredicted RBP7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 DCP1AQ9NPI6 582 aaPredicted RBP7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 TOMM22Q9NS69 142 aa7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 FANCLQ9NW38 375 aa7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 PCDHB6Q9Y5E3 794 aa7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 PDS5AQ29RF7 1337 aaKnown RBP7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 TMEM232C9JQI7 657 aa7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 POLR2DO15514 142 aaKnown RBP7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 PPP1R11O60927 126 aaPredicted RBP7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 TUBB4AP04350 444 aa7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 PCP11498 1178 aaKnown RBP7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 ZNF18P17022 549 aa7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 BMS1Q14692 1282 aaKnown RBP7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 POSTNQ15063 836 aa7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 NSMFQ6X4W1 530 aa7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 MLKLQ8NB16 471 aa7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 KIF18AQ8NI77 898 aa7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 SPATA20Q8TB22 786 aa7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 NUP133Q8WUM0 1156 aa7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 FAM84BQ96KN1 310 aaPredicted RBP7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 UBAC1Q9BSL1 405 aa7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 PHF20Q9BVI0 1012 aa7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 ZSWIM4Q9H7M6 989 aa7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 L2HGDHQ9H9P8 463 aa7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 AATFQ9NY61 560 aaKnown RBP eCLIP7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 RAI14Q9P0K7 980 aa7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 GULP1Q9UBP9 304 aa7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 HOOK1Q9UJC3 728 aaKnown RBP7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 ZNF652Q9Y2D9 606 aa7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.62□□□□□ -1.19
CSNK2A1-204ENST00000400227 CYP2D7A0A087X1C5 515 aa7.61□□□□□ -1.19
CSNK2A1-204ENST00000400227 A0A1W2PQJ5 194 aa7.61□□□□□ -1.19
CSNK2A1-204ENST00000400227 TRIM75PA6NK02 468 aa7.61□□□□□ -1.19
CSNK2A1-204ENST00000400227 PLEKHA8P1O95397 391 aa7.61□□□□□ -1.19
CSNK2A1-204ENST00000400227 SERPINC1P01008 464 aa7.61□□□□□ -1.19
CSNK2A1-204ENST00000400227 MPOP05164 745 aa7.61□□□□□ -1.19
CSNK2A1-204ENST00000400227 SDHBP21912 280 aa7.61□□□□□ -1.19
CSNK2A1-204ENST00000400227 LTBRP36941 435 aa7.61□□□□□ -1.19
CSNK2A1-204ENST00000400227 MESP2Q0VG99 397 aa7.61□□□□□ -1.19
CSNK2A1-204ENST00000400227 NPY5RQ15761 445 aa7.61□□□□□ -1.19
CSNK2A1-204ENST00000400227 LONRF2Q1L5Z9 754 aa7.61□□□□□ -1.19
CSNK2A1-204ENST00000400227 CCDC93Q567U6 631 aa7.61□□□□□ -1.19
CSNK2A1-204ENST00000400227 EARS2Q5JPH6 523 aaKnown RBP7.61□□□□□ -1.19
CSNK2A1-204ENST00000400227 CTR9Q6PD62 1173 aa7.61□□□□□ -1.19
CSNK2A1-204ENST00000400227 USP49Q70CQ1 688 aa7.61□□□□□ -1.19
CSNK2A1-204ENST00000400227 TMEM139Q8IV31 216 aa7.61□□□□□ -1.19
CSNK2A1-204ENST00000400227 REXO1L1PQ8IX06 675 aa7.61□□□□□ -1.19
CSNK2A1-204ENST00000400227 GRAMD1CQ8IYS0 662 aa7.61□□□□□ -1.19
CSNK2A1-204ENST00000400227 LZTR1Q8N653 840 aa7.61□□□□□ -1.19
CSNK2A1-204ENST00000400227 POU5F2Q8N7G0 328 aa7.61□□□□□ -1.19
CSNK2A1-204ENST00000400227 TRIML1Q8N9V2 468 aa7.61□□□□□ -1.19
CSNK2A1-204ENST00000400227 SMARCE1Q969G3 411 aa7.61□□□□□ -1.19
CSNK2A1-204ENST00000400227 ERO1AQ96HE7 468 aa7.61□□□□□ -1.19
CSNK2A1-204ENST00000400227 MED15Q96RN5 788 aa7.61□□□□□ -1.19
CSNK2A1-204ENST00000400227 CSRNP2Q9H175 543 aa7.61□□□□□ -1.19
CSNK2A1-204ENST00000400227 CABP5Q9NP86 173 aa7.61□□□□□ -1.19
CSNK2A1-204ENST00000400227 RBM28Q9NW13 759 aaKnown RBP7.61□□□□□ -1.19
CSNK2A1-204ENST00000400227 CGNQ9P2M7 1197 aaKnown RBP7.61□□□□□ -1.19
CSNK2A1-204ENST00000400227 ABCF2Q9UG63 623 aa7.61□□□□□ -1.19
CSNK2A1-204ENST00000400227 ZNF215Q9UL58 517 aaPredicted RBP7.61□□□□□ -1.19
CSNK2A1-204ENST00000400227 RWDD3Q9Y3V2 267 aa7.61□□□□□ -1.19
CSNK2A1-204ENST00000400227 NPFFR2Q9Y5X5 522 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms