RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 TRIM17Q9Y577 477 aa6.75□□□□□ -1.33
TRAPPC13-202ENST00000399438 SLC12A7Q9Y666 1083 aa6.75□□□□□ -1.33
TRAPPC13-202ENST00000399438 TAF1LQ8IZX4 1826 aa6.75□□□□□ -1.33
TRAPPC13-202ENST00000399438 ELP1O95163 1332 aa6.75□□□□□ -1.33
TRAPPC13-202ENST00000399438 PSDA5PKW4 1024 aaPredicted RBP6.75□□□□□ -1.33
TRAPPC13-202ENST00000399438 PGPEP1LA6NFU8 196 aa6.75□□□□□ -1.33
TRAPPC13-202ENST00000399438 CCDC69A6NI79 296 aa6.75□□□□□ -1.33
TRAPPC13-202ENST00000399438 TMEM232C9JQI7 657 aa6.75□□□□□ -1.33
TRAPPC13-202ENST00000399438 F5H0A9 414 aaPredicted RBP6.75□□□□□ -1.33
TRAPPC13-202ENST00000399438 HSPA6P17066 643 aa6.75□□□□□ -1.33
TRAPPC13-202ENST00000399438 STX17P56962 302 aa6.75□□□□□ -1.33
TRAPPC13-202ENST00000399438 SP140Q13342 867 aa6.75□□□□□ -1.33
TRAPPC13-202ENST00000399438 LAPTM5Q13571 262 aa6.75□□□□□ -1.33
TRAPPC13-202ENST00000399438 IQCB1Q15051 598 aa6.75□□□□□ -1.33
TRAPPC13-202ENST00000399438 EARS2Q5JPH6 523 aaKnown RBP6.75□□□□□ -1.33
TRAPPC13-202ENST00000399438 FKBP15Q5T1M5 1219 aa6.75□□□□□ -1.33
TRAPPC13-202ENST00000399438 OVCH2Q7RTZ1 564 aa6.75□□□□□ -1.33
TRAPPC13-202ENST00000399438 PTRH1Q86Y79 214 aaKnown RBP6.75□□□□□ -1.33
TRAPPC13-202ENST00000399438 CCAR2Q8N163 923 aaKnown RBP6.75□□□□□ -1.33
TRAPPC13-202ENST00000399438 FAXDC2Q96IV6 333 aa6.75□□□□□ -1.33
TRAPPC13-202ENST00000399438 PLIN2Q99541 437 aa6.75□□□□□ -1.33
TRAPPC13-202ENST00000399438 UTP14AQ9BVJ6 771 aaKnown RBP6.75□□□□□ -1.33
TRAPPC13-202ENST00000399438 TMEM120AQ9BXJ8 343 aa6.75□□□□□ -1.33
TRAPPC13-202ENST00000399438 TEX13AQ9BXU3 409 aaPredicted RBP6.75□□□□□ -1.33
TRAPPC13-202ENST00000399438 AATFQ9NY61 560 aaKnown RBP eCLIP6.75□□□□□ -1.33
TRAPPC13-202ENST00000399438 AIPL1Q9NZN9 384 aa6.75□□□□□ -1.33
TRAPPC13-202ENST00000399438 DKK3Q9UBP4 350 aa6.75□□□□□ -1.33
TRAPPC13-202ENST00000399438 GRHPRQ9UBQ7 328 aa6.75□□□□□ -1.33
TRAPPC13-202ENST00000399438 APOBEC2Q9Y235 224 aaKnown RBP6.75□□□□□ -1.33
TRAPPC13-202ENST00000399438 ZFP37Q9Y6Q3 630 aaPredicted RBP6.75□□□□□ -1.33
TRAPPC13-202ENST00000399438 SALL1Q9NSC2 1324 aa6.75□□□□□ -1.33
TRAPPC13-202ENST00000399438 KIF2AO00139 706 aaPredicted RBP6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 SH2B2O14492 632 aaPredicted RBP6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 MCF2LO15068 1137 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 PPP1R12BO60237 982 aaPredicted RBP6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 ZBED4O75132 1171 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 ADAMTS4O75173 837 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 FBXO24O75426 580 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 PAHP00439 452 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 SLURP2P0DP57 97 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 TNNT1P13805 278 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 TMOD1P28289 359 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 AFMP43652 599 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 NOP2P46087 812 aaKnown RBP6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 LIG3P49916 1009 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 GPR85P60893 370 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 HS1BP3Q53T59 392 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 CAVIN4Q5BKX8 364 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 NAA16Q6N069 864 aaPredicted RBP6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 FMR1NBQ8N0W7 255 aaPredicted RBP6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 PPM1NQ8N819 430 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 LRRN4CLQ8ND94 238 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 ZMIZ2Q8NF64 920 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 ENGASEQ8NFI3 743 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 GOT1L1Q8NHS2 421 aaPredicted RBP6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 HPS3Q969F9 1004 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 ZDHHC16Q969W1 377 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 TRIM11Q96F44 468 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 ZSCAN16Q9H4T2 348 aaPredicted RBP6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 BCL2L12Q9HB09 334 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 ZHX1Q9UKY1 873 aaPredicted RBP6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 SART1O43290 800 aaKnown RBP6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 SLC22A3O75751 556 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 PLEKHA8P1O95397 391 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 U2AF2P26368 475 aaKnown RBP eCLIP6.74□□□□□ -1.337e-7■■■■□ 21.2
TRAPPC13-202ENST00000399438 IGHMBP2P38935 993 aaKnown RBP6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 TGFB2P61812 414 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 CLCQ05315 142 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 STX1AQ16623 288 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 SHC4Q6S5L8 630 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 GPR152Q8TDT2 470 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 ZNF274Q96GC6 653 aaPredicted RBP6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 LY9Q9HBG7 655 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 OLA1Q9NTK5 396 aaKnown RBP6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 PCDHB6Q9Y5E3 794 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 N4BP2Q86UW6 1770 aaPredicted RBP6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 NDC80O14777 642 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 TFE3P19532 575 aaPredicted RBP6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 PRDX5P30044 214 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 CLNS1AP54105 237 aaKnown RBP6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 MAP3K12Q12852 859 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 IFIT1BQ5T764 474 aaKnown RBP6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 FGD2Q7Z6J4 655 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 DIS3L2Q8IYB7 885 aaKnown RBP6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 ARHGAP39Q9C0H5 1083 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 UNC93B1Q9H1C4 597 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 CABP5Q9NP86 173 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 GPR108Q9NPR9 543 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 MCM9Q9NXL9 1143 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 ANGPTL3Q9Y5C1 460 aa6.74□□□□□ -1.33
TRAPPC13-202ENST00000399438 TCRBV5S4A2TA0A5A2 114 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 LACTBL1A8MY62 500 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 NCK2O43639 380 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 ENDOD1O94919 500 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 CD9P21926 228 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 SYKP43405 635 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 GBE1Q04446 702 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 TAF5Q15542 800 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 KRT74Q7RTS7 529 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 C19orf47Q8N9M1 422 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms