RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 ITIH3Q06033 890 aa16.34■□□□□ 0.21
SMIM11A-203ENST00000399299 CBX2Q14781 532 aaPredicted RBP16.34■□□□□ 0.21
SMIM11A-203ENST00000399299 SLC22A17Q8WUG5 538 aa16.34■□□□□ 0.21
SMIM11A-203ENST00000399299 CCSER1Q9C0I3 900 aa16.34■□□□□ 0.21
SMIM11A-203ENST00000399299 PTPRHQ9HD43 1115 aa16.34■□□□□ 0.21
SMIM11A-203ENST00000399299 CHST7Q9NS84 486 aa16.34■□□□□ 0.21
SMIM11A-203ENST00000399299 LARSQ9P2J5 1176 aaKnown RBP16.34■□□□□ 0.21
SMIM11A-203ENST00000399299 ADAM28Q9UKQ2 775 aa16.34■□□□□ 0.21
SMIM11A-203ENST00000399299 MTMR6Q9Y217 621 aa16.34■□□□□ 0.21
SMIM11A-203ENST00000399299 MYH15Q9Y2K3 1946 aa16.34■□□□□ 0.21
SMIM11A-203ENST00000399299 CITO14578 2027 aa16.33■□□□□ 0.21
SMIM11A-203ENST00000399299 SFI1A8K8P3 1242 aa16.33■□□□□ 0.2
SMIM11A-203ENST00000399299 F8W810 466 aa16.33■□□□□ 0.2
SMIM11A-203ENST00000399299 H0YCG3 227 aa16.33■□□□□ 0.2
SMIM11A-203ENST00000399299 SLC16A4O15374 487 aa16.33■□□□□ 0.2
SMIM11A-203ENST00000399299 BRD1O95696 1058 aa16.33■□□□□ 0.2
SMIM11A-203ENST00000399299 CNPP09543 421 aaKnown RBP16.33■□□□□ 0.2
SMIM11A-203ENST00000399299 PLCG1P19174 1290 aa16.33■□□□□ 0.2
SMIM11A-203ENST00000399299 SCP2P22307 547 aa16.33■□□□□ 0.2
SMIM11A-203ENST00000399299 PROZP22891 400 aa16.33■□□□□ 0.2
SMIM11A-203ENST00000399299 GRM5P41594 1212 aa16.33■□□□□ 0.2
SMIM11A-203ENST00000399299 GLUD2P49448 558 aa16.33■□□□□ 0.2
SMIM11A-203ENST00000399299 DSG1Q02413 1049 aa16.33■□□□□ 0.2
SMIM11A-203ENST00000399299 RAD51AP2Q09MP3 1159 aa16.33■□□□□ 0.2
SMIM11A-203ENST00000399299 HSP90AA2PQ14568 343 aaPredicted RBP16.33■□□□□ 0.2
SMIM11A-203ENST00000399299 NAB2Q15742 525 aa16.33■□□□□ 0.2
SMIM11A-203ENST00000399299 ZNF568Q3ZCX4 644 aa16.33■□□□□ 0.2
SMIM11A-203ENST00000399299 ARSHQ5FYA8 562 aa16.33■□□□□ 0.2
SMIM11A-203ENST00000399299 KIAA0319Q5VV43 1072 aa16.33■□□□□ 0.2
SMIM11A-203ENST00000399299 CES5AQ6NT32 575 aa16.33■□□□□ 0.2
SMIM11A-203ENST00000399299 FUT10Q6P4F1 479 aa16.33■□□□□ 0.2
SMIM11A-203ENST00000399299 TMEM161BQ8NDZ6 487 aa16.33■□□□□ 0.2
SMIM11A-203ENST00000399299 LRRC15Q8TF66 581 aa16.33■□□□□ 0.2
SMIM11A-203ENST00000399299 NECTIN4Q96NY8 510 aa16.33■□□□□ 0.2
SMIM11A-203ENST00000399299 KLHL5Q96PQ7 755 aa16.33■□□□□ 0.2
SMIM11A-203ENST00000399299 CDT1Q9H211 546 aa16.33■□□□□ 0.2
SMIM11A-203ENST00000399299 ADAM7Q9H2U9 754 aa16.33■□□□□ 0.2
SMIM11A-203ENST00000399299 ZSCAN16Q9H4T2 348 aaPredicted RBP16.33■□□□□ 0.2
SMIM11A-203ENST00000399299 RXFP1Q9HBX9 757 aa16.33■□□□□ 0.2
SMIM11A-203ENST00000399299 BLOC1S4Q9NUP1 217 aa16.33■□□□□ 0.2
SMIM11A-203ENST00000399299 GDAQ9Y2T3 454 aa16.33■□□□□ 0.2
SMIM11A-203ENST00000399299 SRPRBQ9Y5M8 271 aaKnown RBP16.33■□□□□ 0.2
SMIM11A-203ENST00000399299 CLIC4Q9Y696 253 aa16.33■□□□□ 0.2
SMIM11A-203ENST00000399299 DCXO43602 365 aa16.32■□□□□ 0.2
SMIM11A-203ENST00000399299 STX6O43752 255 aa16.32■□□□□ 0.2
SMIM11A-203ENST00000399299 GPR37L1O60883 481 aa16.32■□□□□ 0.2
SMIM11A-203ENST00000399299 MAPTP10636 758 aaKnown RBP16.32■□□□□ 0.2
SMIM11A-203ENST00000399299 MCF2P10911 925 aa16.32■□□□□ 0.2
SMIM11A-203ENST00000399299 EPCAMP16422 314 aa16.32■□□□□ 0.2
SMIM11A-203ENST00000399299 CLCN4P51793 760 aa16.32■□□□□ 0.2
SMIM11A-203ENST00000399299 ZNF131P52739 623 aa16.32■□□□□ 0.2
SMIM11A-203ENST00000399299 NCKAP1LP55160 1127 aa16.32■□□□□ 0.2
SMIM11A-203ENST00000399299 STRN3Q13033 797 aa16.32■□□□□ 0.2
SMIM11A-203ENST00000399299 KARSQ15046 597 aaKnown RBP16.32■□□□□ 0.2
SMIM11A-203ENST00000399299 USP41Q3LFD5 358 aa16.32■□□□□ 0.2
SMIM11A-203ENST00000399299 MPZL3Q6UWV2 235 aa16.32■□□□□ 0.2
SMIM11A-203ENST00000399299 TAS1R1Q7RTX1 841 aa16.32■□□□□ 0.2
SMIM11A-203ENST00000399299 GPBP1Q86WP2 473 aa16.32■□□□□ 0.2
SMIM11A-203ENST00000399299 RAD54LQ92698 747 aa16.32■□□□□ 0.2
SMIM11A-203ENST00000399299 REEP2Q9BRK0 252 aa16.32■□□□□ 0.2
SMIM11A-203ENST00000399299 CCDC94Q9BW85 323 aaPredicted RBP16.32■□□□□ 0.2
SMIM11A-203ENST00000399299 TARS2Q9BW92 718 aaKnown RBP16.32■□□□□ 0.2
SMIM11A-203ENST00000399299 TOPORSQ9NS56 1045 aaPredicted RBP16.32■□□□□ 0.2
SMIM11A-203ENST00000399299 FBXO2Q9UK22 296 aaPredicted RBP16.32■□□□□ 0.2
SMIM11A-203ENST00000399299 PLXNA3P51805 1871 aa16.31■□□□□ 0.2
SMIM11A-203ENST00000399299 DENND4AQ7Z401 1863 aa16.31■□□□□ 0.2
SMIM11A-203ENST00000399299 SF3B1O75533 1304 aaKnown RBP eCLIP16.31■□□□□ 0.2
SMIM11A-203ENST00000399299 ABLIM1O14639 778 aa16.31■□□□□ 0.2
SMIM11A-203ENST00000399299 C1RP00736 705 aa16.31■□□□□ 0.2
SMIM11A-203ENST00000399299 ADH1AP07327 375 aa16.31■□□□□ 0.2
SMIM11A-203ENST00000399299 KLRC2P26717 231 aa16.31■□□□□ 0.2
SMIM11A-203ENST00000399299 MTHFRP42898 656 aa16.31■□□□□ 0.2
SMIM11A-203ENST00000399299 XKR4Q5GH76 650 aa16.31■□□□□ 0.2
SMIM11A-203ENST00000399299 HERC4Q5GLZ8 1057 aaPredicted RBP16.31■□□□□ 0.2
SMIM11A-203ENST00000399299 TMEM31Q5JXX7 168 aa16.31■□□□□ 0.2
SMIM11A-203ENST00000399299 FAM173BQ6P4H8 233 aa16.31■□□□□ 0.2
SMIM11A-203ENST00000399299 ZPBP2Q6X784 338 aa16.31■□□□□ 0.2
SMIM11A-203ENST00000399299 RNF135Q8IUD6 432 aa16.31■□□□□ 0.2
SMIM11A-203ENST00000399299 RASSF8Q8NHQ8 419 aa16.31■□□□□ 0.2
SMIM11A-203ENST00000399299 LARP4BQ92615 738 aaKnown RBP16.31■□□□□ 0.2
SMIM11A-203ENST00000399299 FBXL18Q96ME1 805 aa16.31■□□□□ 0.2
SMIM11A-203ENST00000399299 PPP1R10Q96QC0 940 aaKnown RBP16.31■□□□□ 0.2
SMIM11A-203ENST00000399299 PAAF1Q9BRP4 392 aa16.31■□□□□ 0.2
SMIM11A-203ENST00000399299 GPR62Q9BZJ7 368 aa16.31■□□□□ 0.2
SMIM11A-203ENST00000399299 CXCL16Q9H2A7 254 aa16.31■□□□□ 0.2
SMIM11A-203ENST00000399299 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.31■□□□□ 0.2
SMIM11A-203ENST00000399299 GTF3C3Q9Y5Q9 886 aa16.31■□□□□ 0.2
SMIM11A-203ENST00000399299 PDCD11Q14690 1871 aaKnown RBP16.31■□□□□ 0.2
SMIM11A-203ENST00000399299 MTCL1Q9Y4B5 1905 aaKnown RBP16.3■□□□□ 0.2
SMIM11A-203ENST00000399299 NPHP3-ACAD11A0A0J9YXS1 232 aa16.3■□□□□ 0.2
SMIM11A-203ENST00000399299 CASTOR2A6NHX0 329 aa16.3■□□□□ 0.2
SMIM11A-203ENST00000399299 TMEM189-UBE2V1I3L0A0 370 aa16.3■□□□□ 0.2
SMIM11A-203ENST00000399299 C2CD2LO14523 706 aa16.3■□□□□ 0.2
SMIM11A-203ENST00000399299 TEX28O15482 410 aa16.3■□□□□ 0.2
SMIM11A-203ENST00000399299 TADA2AO75478 443 aa16.3■□□□□ 0.2
SMIM11A-203ENST00000399299 TOM1L1O75674 476 aa16.3■□□□□ 0.2
SMIM11A-203ENST00000399299 PDIA4P13667 645 aaKnown RBP16.3■□□□□ 0.2
SMIM11A-203ENST00000399299 MARCKSP29966 332 aaPredicted RBP16.3■□□□□ 0.2
SMIM11A-203ENST00000399299 YARSP54577 528 aaKnown RBP16.3■□□□□ 0.2
SMIM11A-203ENST00000399299 CREMQ03060 361 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms