RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 MRPL9Q9BYD2 267 aaKnown RBP13.05□□□□□ -0.32
SMIM11A-201ENST00000399292 POLR3FQ9H1D9 316 aaPredicted RBP13.05□□□□□ -0.32
SMIM11A-201ENST00000399292 IGFLR1Q9H665 355 aa13.05□□□□□ -0.32
SMIM11A-201ENST00000399292 PCDHB2Q9Y5E7 798 aa13.05□□□□□ -0.32
SMIM11A-201ENST00000399292 COL4A4P53420 1690 aaPredicted RBP13.05□□□□□ -0.32
SMIM11A-201ENST00000399292 CYP11B2P19099 503 aa13.04□□□□□ -0.32
SMIM11A-201ENST00000399292 AXLP30530 894 aa13.04□□□□□ -0.32
SMIM11A-201ENST00000399292 IRS1P35568 1242 aa13.04□□□□□ -0.32
SMIM11A-201ENST00000399292 PRPHP41219 470 aa13.04□□□□□ -0.32
SMIM11A-201ENST00000399292 ALDH7A1P49419 539 aaKnown RBP13.04□□□□□ -0.32
SMIM11A-201ENST00000399292 PLCB3Q01970 1234 aa13.04□□□□□ -0.32
SMIM11A-201ENST00000399292 HYAL1Q12794 435 aa13.04□□□□□ -0.32
SMIM11A-201ENST00000399292 CAPSQ13938 189 aa13.04□□□□□ -0.32
SMIM11A-201ENST00000399292 COL19A1Q14993 1142 aa13.04□□□□□ -0.32
SMIM11A-201ENST00000399292 MRPL10Q7Z7H8 261 aaKnown RBP13.04□□□□□ -0.32
SMIM11A-201ENST00000399292 IGSF22Q8N9C0 903 aa13.04□□□□□ -0.32
SMIM11A-201ENST00000399292 CNNM3Q8NE01 707 aa13.04□□□□□ -0.32
SMIM11A-201ENST00000399292 NFKBIZQ9BYH8 718 aa13.04□□□□□ -0.32
SMIM11A-201ENST00000399292 CLDND1Q9NY35 253 aa13.04□□□□□ -0.32
SMIM11A-201ENST00000399292 SPG21Q9NZD8 308 aa13.04□□□□□ -0.32
SMIM11A-201ENST00000399292 KIAA1024Q9UPX6 916 aa13.04□□□□□ -0.32
SMIM11A-201ENST00000399292 H3BQ06 376 aaPredicted RBP13.03□□□□□ -0.32
SMIM11A-201ENST00000399292 OFD1O75665 1012 aa13.03□□□□□ -0.32
SMIM11A-201ENST00000399292 PPM1AP35813 382 aa13.03□□□□□ -0.32
SMIM11A-201ENST00000399292 CUL4AQ13619 759 aa13.03□□□□□ -0.32
SMIM11A-201ENST00000399292 IL17AQ16552 155 aa13.03□□□□□ -0.32
SMIM11A-201ENST00000399292 ECM1Q16610 540 aa13.03□□□□□ -0.32
SMIM11A-201ENST00000399292 NOMO2Q5JPE7 1267 aa13.03□□□□□ -0.32
SMIM11A-201ENST00000399292 KRT79Q5XKE5 535 aa13.03□□□□□ -0.32
SMIM11A-201ENST00000399292 PDE12Q6L8Q7 609 aaKnown RBP13.03□□□□□ -0.32
SMIM11A-201ENST00000399292 NOTUMQ6P988 496 aa13.03□□□□□ -0.32
SMIM11A-201ENST00000399292 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.03□□□□□ -0.32
SMIM11A-201ENST00000399292 SNX29Q8TEQ0 813 aa13.03□□□□□ -0.32
SMIM11A-201ENST00000399292 MRPS27Q92552 414 aaKnown RBP13.03□□□□□ -0.32
SMIM11A-201ENST00000399292 CCDC51Q96ER9 411 aa13.03□□□□□ -0.32
SMIM11A-201ENST00000399292 UBN1Q9NPG3 1134 aa13.03□□□□□ -0.32
SMIM11A-201ENST00000399292 GPRC5CQ9NQ84 441 aa13.03□□□□□ -0.32
SMIM11A-201ENST00000399292 TLR9Q9NR96 1032 aa13.03□□□□□ -0.32
SMIM11A-201ENST00000399292 DDX19AQ9NUU7 478 aaKnown RBP13.03□□□□□ -0.32
SMIM11A-201ENST00000399292 DNM3Q9UQ16 869 aa13.03□□□□□ -0.32
SMIM11A-201ENST00000399292 LZTS1Q9Y250 596 aa13.03□□□□□ -0.32
SMIM11A-201ENST00000399292 RALGAPA2Q2PPJ7 1873 aa13.03□□□□□ -0.32
SMIM11A-201ENST00000399292 CARNS1A5YM72 827 aa13.02□□□□□ -0.33
SMIM11A-201ENST00000399292 LRRIQ4A6NIV6 560 aa13.02□□□□□ -0.33
SMIM11A-201ENST00000399292 FIGNL2A6NMB9 653 aa13.02□□□□□ -0.33
SMIM11A-201ENST00000399292 MEIS3P2A8K0S8 358 aa13.02□□□□□ -0.33
SMIM11A-201ENST00000399292 TSPAN1O60635 241 aa13.02□□□□□ -0.33
SMIM11A-201ENST00000399292 NCLP19338 710 aaKnown RBP13.02□□□□□ -0.33
SMIM11A-201ENST00000399292 GTF2F1P35269 517 aaKnown RBP eCLIP13.02□□□□□ -0.33
SMIM11A-201ENST00000399292 PBX3P40426 434 aa13.02□□□□□ -0.33
SMIM11A-201ENST00000399292 BCAR1P56945 870 aa13.02□□□□□ -0.33
SMIM11A-201ENST00000399292 ERVFC1P60507 584 aa13.02□□□□□ -0.33
SMIM11A-201ENST00000399292 PTSQ03393 145 aa13.02□□□□□ -0.33
SMIM11A-201ENST00000399292 RNASELQ05823 741 aaKnown RBP13.02□□□□□ -0.33
SMIM11A-201ENST00000399292 MBTD1Q05BQ5 628 aa13.02□□□□□ -0.33
SMIM11A-201ENST00000399292 ADAM15Q13444 863 aa13.02□□□□□ -0.33
SMIM11A-201ENST00000399292 UBXN11Q5T124 520 aa13.02□□□□□ -0.33
SMIM11A-201ENST00000399292 AGMOQ6ZNB7 445 aa13.02□□□□□ -0.33
SMIM11A-201ENST00000399292 RBM23Q86U06 439 aaKnown RBP13.02□□□□□ -0.33
SMIM11A-201ENST00000399292 ZBTB8OSQ8IWT0 167 aa13.02□□□□□ -0.33
SMIM11A-201ENST00000399292 URGCPQ8TCY9 931 aa13.02□□□□□ -0.33
SMIM11A-201ENST00000399292 CPB2Q96IY4 423 aa13.02□□□□□ -0.33
SMIM11A-201ENST00000399292 NECAB3Q96P71 396 aaPredicted RBP13.02□□□□□ -0.33
SMIM11A-201ENST00000399292 CSRNP2Q9H175 543 aa13.02□□□□□ -0.33
SMIM11A-201ENST00000399292 BHMT2Q9H2M3 363 aa13.02□□□□□ -0.33
SMIM11A-201ENST00000399292 TLE6Q9H808 572 aa13.02□□□□□ -0.33
SMIM11A-201ENST00000399292 KANSL3Q9P2N6 904 aa13.02□□□□□ -0.33
SMIM11A-201ENST00000399292 INPP5FQ9Y2H2 1132 aa13.02□□□□□ -0.33
SMIM11A-201ENST00000399292 PP2D1A8MPX8 630 aa13.01□□□□□ -0.33
SMIM11A-201ENST00000399292 ITGA4P13612 1032 aa13.01□□□□□ -0.33
SMIM11A-201ENST00000399292 ARF4P18085 180 aaPredicted RBP13.01□□□□□ -0.33
SMIM11A-201ENST00000399292 PDCP20941 246 aa13.01□□□□□ -0.33
SMIM11A-201ENST00000399292 CDC25AP30304 524 aa13.01□□□□□ -0.33
SMIM11A-201ENST00000399292 LTBRP36941 435 aa13.01□□□□□ -0.33
SMIM11A-201ENST00000399292 NRIP1P48552 1158 aa13.01□□□□□ -0.33
SMIM11A-201ENST00000399292 ATP2C1P98194 919 aaPredicted RBP13.01□□□□□ -0.33
SMIM11A-201ENST00000399292 TMC7Q7Z402 723 aa13.01□□□□□ -0.33
SMIM11A-201ENST00000399292 ADGRD2Q7Z7M1 963 aa13.01□□□□□ -0.33
SMIM11A-201ENST00000399292 HACE1Q8IYU2 909 aa13.01□□□□□ -0.33
SMIM11A-201ENST00000399292 EFHBQ8N7U6 833 aa13.01□□□□□ -0.33
SMIM11A-201ENST00000399292 IFT74Q96LB3 600 aa13.01□□□□□ -0.33
SMIM11A-201ENST00000399292 EIF2AQ9BY44 585 aaKnown RBP13.01□□□□□ -0.33
SMIM11A-201ENST00000399292 TRIM6Q9C030 488 aaPredicted RBP13.01□□□□□ -0.33
SMIM11A-201ENST00000399292 C2orf40Q9H1Z8 148 aa13.01□□□□□ -0.33
SMIM11A-201ENST00000399292 NRDE2Q9H7Z3 1164 aa13.01□□□□□ -0.33
SMIM11A-201ENST00000399292 RSAD1Q9HA92 442 aa13.01□□□□□ -0.33
SMIM11A-201ENST00000399292 NGRNQ9NPE2 291 aaKnown RBP13.01□□□□□ -0.33
SMIM11A-201ENST00000399292 TBC1D13Q9NVG8 400 aa13.01□□□□□ -0.33
SMIM11A-201ENST00000399292 PRMT7Q9NVM4 692 aaPredicted RBP13.01□□□□□ -0.33
SMIM11A-201ENST00000399292 FAM50BQ9Y247 325 aa13.01□□□□□ -0.33
SMIM11A-201ENST00000399292 PCDHGC5Q9Y5F6 944 aa13.01□□□□□ -0.33
SMIM11A-201ENST00000399292 CNTNAP2Q9UHC6 1331 aa13.01□□□□□ -0.33
SMIM11A-201ENST00000399292 NLRC5Q86WI3 1866 aa13□□□□□ -0.33
SMIM11A-201ENST00000399292 A0A1B0GUA9 196 aa13□□□□□ -0.33
SMIM11A-201ENST00000399292 VWA3AA6NCI4 1184 aa13□□□□□ -0.33
SMIM11A-201ENST00000399292 NT5C1B-RDH14C9J2C7 533 aa13□□□□□ -0.33
SMIM11A-201ENST00000399292 PER2O15055 1255 aa13□□□□□ -0.33
SMIM11A-201ENST00000399292 ZC3H11AO75152 810 aaKnown RBP eCLIP13□□□□□ -0.33
SMIM11A-201ENST00000399292 EYA4O95677 639 aa13□□□□□ -0.33
SMIM11A-201ENST00000399292 ALDH2P05091 517 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms