RNA–Protein interactions for RNA: ENST00000398792.3

CDH23-204, Transcript of cadherin related 23, humanhuman

TSL 2

Gene CDH23, Length 1,649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-204ENST00000398792 PPP3CAQ08209 521 aa18.1■□□□□ 0.49
CDH23-204ENST00000398792 KCNMA1Q12791 1236 aa18.1■□□□□ 0.49
CDH23-204ENST00000398792 TRIM14Q14142 442 aa18.1■□□□□ 0.49
CDH23-204ENST00000398792 FBXO47Q5MNV8 452 aa18.1■□□□□ 0.49
CDH23-204ENST00000398792 ZNF618Q5T7W0 954 aa18.1■□□□□ 0.49
CDH23-204ENST00000398792 CCDC186Q7Z3E2 898 aa18.1■□□□□ 0.49
CDH23-204ENST00000398792 APBB1IPQ7Z5R6 666 aaPredicted RBP18.1■□□□□ 0.49
CDH23-204ENST00000398792 CAGE1Q8TC20 777 aa18.1■□□□□ 0.49
CDH23-204ENST00000398792 DIS3LQ8TF46 1054 aaKnown RBP18.1■□□□□ 0.49
CDH23-204ENST00000398792 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.1■□□□□ 0.49
CDH23-204ENST00000398792 DNAH12Q6ZR08 3092 aa18.09■□□□□ 0.49
CDH23-204ENST00000398792 STX10O60499 249 aa18.09■□□□□ 0.49
CDH23-204ENST00000398792 CD4P01730 458 aa18.09■□□□□ 0.49
CDH23-204ENST00000398792 GYPCP04921 128 aa18.09■□□□□ 0.49
CDH23-204ENST00000398792 DLATP10515 647 aaKnown RBP18.09■□□□□ 0.49
CDH23-204ENST00000398792 GSDMDP57764 484 aa18.09■□□□□ 0.49
CDH23-204ENST00000398792 OSTNP61366 133 aa18.09■□□□□ 0.49
CDH23-204ENST00000398792 KYAT1Q16773 422 aa18.09■□□□□ 0.49
CDH23-204ENST00000398792 TRAF7Q6Q0C0 670 aa18.09■□□□□ 0.49
CDH23-204ENST00000398792 CCDC51Q96ER9 411 aa18.09■□□□□ 0.49
CDH23-204ENST00000398792 PCMTD1Q96MG8 357 aaPredicted RBP18.09■□□□□ 0.49
CDH23-204ENST00000398792 PDE11AQ9HCR9 933 aa18.09■□□□□ 0.49
CDH23-204ENST00000398792 TOPORSQ9NS56 1045 aaPredicted RBP18.09■□□□□ 0.49
CDH23-204ENST00000398792 RALGAPA2Q2PPJ7 1873 aa18.09■□□□□ 0.49
CDH23-204ENST00000398792 P4HA2O15460 535 aa18.09■□□□□ 0.49
CDH23-204ENST00000398792 NPTXRO95502 500 aa18.09■□□□□ 0.49
CDH23-204ENST00000398792 GCLMP48507 274 aa18.09■□□□□ 0.49
CDH23-204ENST00000398792 MXI1P50539 228 aa18.09■□□□□ 0.49
CDH23-204ENST00000398792 CLDN10P78369 228 aa18.09■□□□□ 0.49
CDH23-204ENST00000398792 ENOX2Q16206 610 aaKnown RBP18.09■□□□□ 0.49
CDH23-204ENST00000398792 SLC39A5Q6ZMH5 540 aa18.09■□□□□ 0.49
CDH23-204ENST00000398792 TMEM192Q8IY95 271 aa18.09■□□□□ 0.49
CDH23-204ENST00000398792 FNBP1Q96RU3 617 aa18.09■□□□□ 0.49
CDH23-204ENST00000398792 CGRRF1Q99675 332 aa18.09■□□□□ 0.49
CDH23-204ENST00000398792 CRACR2AQ9BSW2 395 aa18.09■□□□□ 0.49
CDH23-204ENST00000398792 EIF2AQ9BY44 585 aaKnown RBP18.09■□□□□ 0.49
CDH23-204ENST00000398792 TTYH3Q9C0H2 523 aa18.09■□□□□ 0.49
CDH23-204ENST00000398792 GCNT4Q9P109 453 aa18.09■□□□□ 0.49
CDH23-204ENST00000398792 ST3GAL5Q9UNP4 418 aa18.09■□□□□ 0.49
CDH23-204ENST00000398792 RBAK-RBAKDNI3L0D1 243 aa18.08■□□□□ 0.48
CDH23-204ENST00000398792 PMM2O15305 246 aa18.08■□□□□ 0.48
CDH23-204ENST00000398792 PQBP1O60828 265 aaKnown RBP18.08■□□□□ 0.48
CDH23-204ENST00000398792 CLTAP09496 248 aa18.08■□□□□ 0.48
CDH23-204ENST00000398792 STAG3L1P0CL83 205 aa18.08■□□□□ 0.48
CDH23-204ENST00000398792 CXCL8P10145 99 aa18.08■□□□□ 0.48
CDH23-204ENST00000398792 GHRP10912 638 aa18.08■□□□□ 0.48
CDH23-204ENST00000398792 TRIM21P19474 475 aaKnown RBP18.08■□□□□ 0.48
CDH23-204ENST00000398792 GTF2H1P32780 548 aa18.08■□□□□ 0.48
CDH23-204ENST00000398792 GRM5P41594 1212 aa18.08■□□□□ 0.48
CDH23-204ENST00000398792 ATN1P54259 1190 aaPredicted RBP18.08■□□□□ 0.48
CDH23-204ENST00000398792 POU5F1Q01860 360 aaKnown RBP18.08■□□□□ 0.48
CDH23-204ENST00000398792 LPIN1Q14693 890 aa18.08■□□□□ 0.48
CDH23-204ENST00000398792 EXOC3L4Q17RC7 722 aa18.08■□□□□ 0.48
CDH23-204ENST00000398792 FIGNQ5HY92 759 aa18.08■□□□□ 0.48
CDH23-204ENST00000398792 GBP6Q6ZN66 633 aa18.08■□□□□ 0.48
CDH23-204ENST00000398792 ANKRD33Q7Z3H0 272 aa18.08■□□□□ 0.48
CDH23-204ENST00000398792 PPFIBP1Q86W92 1011 aa18.08■□□□□ 0.48
CDH23-204ENST00000398792 CCDC150Q8NCX0 1101 aa18.08■□□□□ 0.48
CDH23-204ENST00000398792 POP1Q99575 1024 aaKnown RBP18.08■□□□□ 0.48
CDH23-204ENST00000398792 LSM14BQ9BX40 385 aaKnown RBP18.08■□□□□ 0.48
CDH23-204ENST00000398792 OSBPL7Q9BZF2 842 aa18.08■□□□□ 0.48
CDH23-204ENST00000398792 MCOLN1Q9GZU1 580 aa18.08■□□□□ 0.48
CDH23-204ENST00000398792 TMEM117Q9H0C3 514 aa18.08■□□□□ 0.48
CDH23-204ENST00000398792 AGO3Q9H9G7 860 aaKnown RBP18.08■□□□□ 0.48
CDH23-204ENST00000398792 TMEM8AQ9HCN3 771 aa18.08■□□□□ 0.48
CDH23-204ENST00000398792 ERVK-5Q9HDB9 667 aa18.08■□□□□ 0.48
CDH23-204ENST00000398792 SQORQ9Y6N5 450 aa18.08■□□□□ 0.48
CDH23-204ENST00000398792 ANK1P16157 1881 aa18.08■□□□□ 0.48
CDH23-204ENST00000398792 TANC1Q9C0D5 1861 aa18.08■□□□□ 0.48
CDH23-204ENST00000398792 PTPRJQ12913 1337 aa18.07■□□□□ 0.48
CDH23-204ENST00000398792 GPR182O15218 404 aa18.07■□□□□ 0.48
CDH23-204ENST00000398792 TLR3O15455 904 aaKnown RBP18.07■□□□□ 0.48
CDH23-204ENST00000398792 UBXN11Q5T124 520 aa18.07■□□□□ 0.48
CDH23-204ENST00000398792 C1orf53Q5VUE5 145 aa18.07■□□□□ 0.48
CDH23-204ENST00000398792 IQCDQ96DY2 449 aa18.07■□□□□ 0.48
CDH23-204ENST00000398792 NUP58Q9BVL2 599 aa18.07■□□□□ 0.48
CDH23-204ENST00000398792 RPF1Q9H9Y2 349 aaKnown RBP18.07■□□□□ 0.48
CDH23-204ENST00000398792 FAM207AQ9NSI2 230 aaPredicted RBP18.07■□□□□ 0.48
CDH23-204ENST00000398792 TULP1O00294 542 aaPredicted RBP18.06■□□□□ 0.48
CDH23-204ENST00000398792 EPHB6O15197 1021 aa18.06■□□□□ 0.48
CDH23-204ENST00000398792 MFAP3LO75121 409 aa18.06■□□□□ 0.48
CDH23-204ENST00000398792 IL18RAPO95256 599 aa18.06■□□□□ 0.48
CDH23-204ENST00000398792 TPM1P09493 284 aa18.06■□□□□ 0.48
CDH23-204ENST00000398792 PON1P27169 355 aa18.06■□□□□ 0.48
CDH23-204ENST00000398792 CD52P31358 61 aa18.06■□□□□ 0.48
CDH23-204ENST00000398792 CASP14P31944 242 aa18.06■□□□□ 0.48
CDH23-204ENST00000398792 FXR1P51114 621 aaKnown RBP eCLIP18.06■□□□□ 0.48
CDH23-204ENST00000398792 NFX1Q12986 1120 aaKnown RBP18.06■□□□□ 0.48
CDH23-204ENST00000398792 PAK2Q13177 524 aa18.06■□□□□ 0.48
CDH23-204ENST00000398792 BFSP2Q13515 415 aa18.06■□□□□ 0.48
CDH23-204ENST00000398792 ARID5BQ14865 1188 aa18.06■□□□□ 0.48
CDH23-204ENST00000398792 SURF1Q15526 300 aa18.06■□□□□ 0.48
CDH23-204ENST00000398792 LMBRD2Q68DH5 695 aaPredicted RBP18.06■□□□□ 0.48
CDH23-204ENST00000398792 KRT39Q6A163 491 aa18.06■□□□□ 0.48
CDH23-204ENST00000398792 WDR49Q8IV35 697 aa18.06■□□□□ 0.48
CDH23-204ENST00000398792 USP38Q8NB14 1042 aa18.06■□□□□ 0.48
CDH23-204ENST00000398792 TRIM6Q9C030 488 aaPredicted RBP18.06■□□□□ 0.48
CDH23-204ENST00000398792 PADI3Q9ULW8 664 aa18.06■□□□□ 0.48
CDH23-204ENST00000398792 A0A1W2PQJ5 194 aa18.05■□□□□ 0.48
CDH23-204ENST00000398792 TTC26A0AVF1 554 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms