RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 URODP06132 367 aa14.77□□□□□ -0.05
VCX3A-202ENST00000398729 SP100P23497 879 aaPredicted RBP14.77□□□□□ -0.05
VCX3A-202ENST00000398729 ITIH3Q06033 890 aa14.77□□□□□ -0.05
VCX3A-202ENST00000398729 DMP1Q13316 513 aaPredicted RBP14.77□□□□□ -0.05
VCX3A-202ENST00000398729 CUL4AQ13619 759 aa14.77□□□□□ -0.05
VCX3A-202ENST00000398729 HYIQ5T013 277 aa14.77□□□□□ -0.05
VCX3A-202ENST00000398729 RINT1Q6NUQ1 792 aa14.77□□□□□ -0.05
VCX3A-202ENST00000398729 KCTD17Q8N5Z5 321 aa14.77□□□□□ -0.05
VCX3A-202ENST00000398729 GSTCDQ8NEC7 633 aa14.77□□□□□ -0.05
VCX3A-202ENST00000398729 CDK5RAP3Q96JB5 506 aa14.77□□□□□ -0.05
VCX3A-202ENST00000398729 DRC1Q96MC2 740 aa14.77□□□□□ -0.05
VCX3A-202ENST00000398729 TIPINQ9BVW5 301 aa14.77□□□□□ -0.05
VCX3A-202ENST00000398729 COLEC11Q9BWP8 271 aa14.77□□□□□ -0.05
VCX3A-202ENST00000398729 IRF2BPLQ9H1B7 796 aa14.77□□□□□ -0.05
VCX3A-202ENST00000398729 ADAM7Q9H2U9 754 aa14.77□□□□□ -0.05
VCX3A-202ENST00000398729 DZANK1Q9NVP4 752 aa14.77□□□□□ -0.05
VCX3A-202ENST00000398729 CACNA1AO00555 2505 aa14.76□□□□□ -0.05
VCX3A-202ENST00000398729 PHLPP2Q6ZVD8 1323 aa14.76□□□□□ -0.05
VCX3A-202ENST00000398729 GALR2O43603 387 aaPredicted RBP14.76□□□□□ -0.05
VCX3A-202ENST00000398729 BMP15O95972 392 aa14.76□□□□□ -0.05
VCX3A-202ENST00000398729 KLRC2P26717 231 aa14.76□□□□□ -0.05
VCX3A-202ENST00000398729 NUBP1P53384 320 aa14.76□□□□□ -0.05
VCX3A-202ENST00000398729 PEX3P56589 373 aa14.76□□□□□ -0.05
VCX3A-202ENST00000398729 DCAF4L1Q3SXM0 396 aa14.76□□□□□ -0.05
VCX3A-202ENST00000398729 ATF7IP2Q5U623 682 aa14.76□□□□□ -0.05
VCX3A-202ENST00000398729 C1orf186Q6ZWK4 172 aa14.76□□□□□ -0.05
VCX3A-202ENST00000398729 KCNK18Q7Z418 384 aa14.76□□□□□ -0.05
VCX3A-202ENST00000398729 BRAPQ7Z569 592 aa14.76□□□□□ -0.05
VCX3A-202ENST00000398729 APBB1IPQ7Z5R6 666 aaPredicted RBP14.76□□□□□ -0.05
VCX3A-202ENST00000398729 KREMEN2Q8NCW0 462 aa14.76□□□□□ -0.05
VCX3A-202ENST00000398729 SLC22A17Q8WUG5 538 aa14.76□□□□□ -0.05
VCX3A-202ENST00000398729 NECTIN4Q96NY8 510 aa14.76□□□□□ -0.05
VCX3A-202ENST00000398729 RUSC1Q9BVN2 902 aa14.76□□□□□ -0.05
VCX3A-202ENST00000398729 HERC2P3Q9BVR0 1158 aa14.76□□□□□ -0.05
VCX3A-202ENST00000398729 BACH2Q9BYV9 841 aa14.76□□□□□ -0.05
VCX3A-202ENST00000398729 SMOC2Q9H3U7 446 aa14.76□□□□□ -0.05
VCX3A-202ENST00000398729 C17orf75Q9HAS0 396 aa14.76□□□□□ -0.05
VCX3A-202ENST00000398729 SNTG2Q9NY99 539 aa14.76□□□□□ -0.05
VCX3A-202ENST00000398729 USP20Q9Y2K6 914 aa14.76□□□□□ -0.05
VCX3A-202ENST00000398729 C2CD2LO14523 706 aa14.75□□□□□ -0.05
VCX3A-202ENST00000398729 LILRB3O75022 631 aa14.75□□□□□ -0.05
VCX3A-202ENST00000398729 RECQL4O94761 1208 aa14.75□□□□□ -0.05
VCX3A-202ENST00000398729 BRD1O95696 1058 aa14.75□□□□□ -0.05
VCX3A-202ENST00000398729 EDN1P05305 212 aa14.75□□□□□ -0.05
VCX3A-202ENST00000398729 CNPP09543 421 aaKnown RBP14.75□□□□□ -0.05
VCX3A-202ENST00000398729 EPCAMP16422 314 aa14.75□□□□□ -0.05
VCX3A-202ENST00000398729 PDCP20941 246 aa14.75□□□□□ -0.05
VCX3A-202ENST00000398729 GUCY2CP25092 1073 aa14.75□□□□□ -0.05
VCX3A-202ENST00000398729 NPTX2P47972 431 aa14.75□□□□□ -0.05
VCX3A-202ENST00000398729 GLUD2P49448 558 aa14.75□□□□□ -0.05
VCX3A-202ENST00000398729 TUSC3Q13454 348 aa14.75□□□□□ -0.05
VCX3A-202ENST00000398729 NT5DC1Q5TFE4 455 aa14.75□□□□□ -0.05
VCX3A-202ENST00000398729 EEF1DP3Q658K8 133 aa14.75□□□□□ -0.05
VCX3A-202ENST00000398729 KIAA1841Q6NSI8 718 aa14.75□□□□□ -0.05
VCX3A-202ENST00000398729 CABP7Q86V35 215 aa14.75□□□□□ -0.05
VCX3A-202ENST00000398729 RNF168Q8IYW5 571 aaPredicted RBP14.75□□□□□ -0.05
VCX3A-202ENST00000398729 DAW1Q8N136 415 aa14.75□□□□□ -0.05
VCX3A-202ENST00000398729 TMEM105Q8N8V8 129 aa14.75□□□□□ -0.05
VCX3A-202ENST00000398729 SYT2Q8N9I0 419 aaPredicted RBP14.75□□□□□ -0.05
VCX3A-202ENST00000398729 AK8Q96MA6 479 aa14.75□□□□□ -0.05
VCX3A-202ENST00000398729 KLHL5Q96PQ7 755 aa14.75□□□□□ -0.05
VCX3A-202ENST00000398729 PNMA5Q96PV4 448 aa14.75□□□□□ -0.05
VCX3A-202ENST00000398729 TMEM134Q9H6X4 195 aa14.75□□□□□ -0.05
VCX3A-202ENST00000398729 KMT5AQ9NQR1 393 aa14.75□□□□□ -0.05
VCX3A-202ENST00000398729 KCNG1Q9UIX4 513 aa14.75□□□□□ -0.05
VCX3A-202ENST00000398729 RBM19Q9Y4C8 960 aaKnown RBP14.75□□□□□ -0.05
VCX3A-202ENST00000398729 DNAH14Q0VDD8 3507 aa14.74□□□□□ -0.05
VCX3A-202ENST00000398729 VPS37CA5D8V6 355 aaPredicted RBP14.74□□□□□ -0.05
VCX3A-202ENST00000398729 SPDYE4A6NLX3 237 aa14.74□□□□□ -0.05
VCX3A-202ENST00000398729 C2CD4DB7Z1M9 353 aa14.74□□□□□ -0.05
VCX3A-202ENST00000398729 SLC26A4O43511 780 aa14.74□□□□□ -0.05
VCX3A-202ENST00000398729 EFEMP2O95967 443 aa14.74□□□□□ -0.05
VCX3A-202ENST00000398729 THP07101 528 aa14.74□□□□□ -0.05
VCX3A-202ENST00000398729 ADH1AP07327 375 aa14.74□□□□□ -0.05
VCX3A-202ENST00000398729 MTHFRP42898 656 aa14.74□□□□□ -0.05
VCX3A-202ENST00000398729 MAPK7Q13164 816 aa14.74□□□□□ -0.05
VCX3A-202ENST00000398729 RARS2Q5T160 578 aaKnown RBP14.74□□□□□ -0.05
VCX3A-202ENST00000398729 FUT10Q6P4F1 479 aa14.74□□□□□ -0.05
VCX3A-202ENST00000398729 TAS1R1Q7RTX1 841 aa14.74□□□□□ -0.05
VCX3A-202ENST00000398729 PLIN2Q99541 437 aa14.74□□□□□ -0.05
VCX3A-202ENST00000398729 MRPL4Q9BYD3 311 aaKnown RBP14.74□□□□□ -0.05
VCX3A-202ENST00000398729 POMKQ9H5K3 350 aa14.74□□□□□ -0.05
VCX3A-202ENST00000398729 KCND2Q9NZV8 630 aa14.74□□□□□ -0.05
VCX3A-202ENST00000398729 ARHGAP28Q9P2N2 729 aa14.74□□□□□ -0.05
VCX3A-202ENST00000398729 ADAM28Q9UKQ2 775 aa14.74□□□□□ -0.05
VCX3A-202ENST00000398729 TNFSF13BQ9Y275 285 aa14.74□□□□□ -0.05
VCX3A-202ENST00000398729 GDAQ9Y2T3 454 aa14.74□□□□□ -0.05
VCX3A-202ENST00000398729 NR2E1Q9Y466 385 aa14.74□□□□□ -0.05
VCX3A-202ENST00000398729 FRYLO94915 3013 aa14.74□□□□□ -0.05
VCX3A-202ENST00000398729 SFI1A8K8P3 1242 aa14.73□□□□□ -0.05
VCX3A-202ENST00000398729 F8W810 466 aa14.73□□□□□ -0.05
VCX3A-202ENST00000398729 PTGESO14684 152 aa14.73□□□□□ -0.05
VCX3A-202ENST00000398729 TADA2AO75478 443 aa14.73□□□□□ -0.05
VCX3A-202ENST00000398729 PLA2G4BP0C869 781 aa14.73□□□□□ -0.05
VCX3A-202ENST00000398729 UBA7P41226 1012 aa14.73□□□□□ -0.05
VCX3A-202ENST00000398729 NBL1P41271 181 aa14.73□□□□□ -0.05
VCX3A-202ENST00000398729 CLCN4P51793 760 aa14.73□□□□□ -0.05
VCX3A-202ENST00000398729 FOXK2Q01167 660 aa14.73□□□□□ -0.05
VCX3A-202ENST00000398729 DSG1Q02413 1049 aa14.73□□□□□ -0.05
VCX3A-202ENST00000398729 HSP90AA2PQ14568 343 aaPredicted RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms