RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 HAUS4Q9H6D7 363 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 RRN3Q9NYV6 651 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 SUCLA2Q9P2R7 463 aaPredicted RBP2.88□□□□□ -1.95
CHD9-202ENST00000398510 HDAC6Q9UBN7 1215 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 PKP3Q9Y446 797 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 SCN2AQ99250 2005 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 UTYO14607 1347 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.88□□□□□ -1.95
CHD9-202ENST00000398510 TRPC1P48995 793 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 CARSP49589 748 aaKnown RBP2.88□□□□□ -1.95
CHD9-202ENST00000398510 COPB1P53618 953 aaKnown RBP2.88□□□□□ -1.95
CHD9-202ENST00000398510 PDCLQ13371 301 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 SNX1Q13596 522 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 KLHL38Q2WGJ6 581 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 ZNF699Q32M78 642 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 ALS2CLQ60I27 953 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 CPXCR1Q8N123 301 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 MMP19Q99542 508 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 WWC3Q9ULE0 1092 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 SCAF8Q9UPN6 1271 aaKnown RBP2.88□□□□□ -1.95
CHD9-202ENST00000398510 ZNF510Q9Y2H8 683 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 CNTNAP4Q9C0A0 1308 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 KLRF2D3W0D1 207 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 E2F3O00716 465 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 CES2O00748 559 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 DNAJC6O75061 913 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 CLASP2O75122 1294 aaKnown RBP2.88□□□□□ -1.95
CHD9-202ENST00000398510 FBXO21O94952 628 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 NR2F2P24468 414 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 HOXC12P31275 282 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 PMS2P54278 862 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 ADCY2Q08462 1091 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 NCAPHQ15003 741 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 DIXDC1Q155Q3 683 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 SMYD5Q6GMV2 418 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 NIPAL1Q6NVV3 410 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 CEP57Q86XR8 500 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 RILPQ96NA2 401 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 ADGRE3Q9BY15 652 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 FBXO44Q9H4M3 255 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 SMURF2Q9HAU4 748 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 XPNPEP3Q9NQH7 507 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 RWDD2AQ9UIY3 292 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.88□□□□□ -1.95
CHD9-202ENST00000398510 AP3M1Q9Y2T2 418 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.88□□□□□ -1.95
CHD9-202ENST00000398510 CLGNO14967 610 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 MAN1A2O60476 641 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 ADCY5O95622 1261 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 ECDO95905 644 aaPredicted RBP2.88□□□□□ -1.95
CHD9-202ENST00000398510 URODP06132 367 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 NPTX2P47972 431 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 PSEN1P49768 467 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 HNMTP50135 292 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 PRMT2P55345 433 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 POLD3Q15054 466 aaPredicted RBP2.88□□□□□ -1.95
CHD9-202ENST00000398510 TTLL9Q3SXZ7 439 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 TCHHL1Q5QJ38 904 aaPredicted RBP2.88□□□□□ -1.95
CHD9-202ENST00000398510 CREB3L3Q68CJ9 461 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 BTNL9Q6UXG8 535 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 CCDC80Q76M96 950 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 LCA5Q86VQ0 697 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 SNX32Q86XE0 403 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 HERC6Q8IVU3 1022 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 ANKRD13AQ8IZ07 590 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 FAM71BQ8TC56 605 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 AFG1LQ8WV93 481 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 HEXDCQ8WVB3 486 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 SPIRE2Q8WWL2 714 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 PBKQ96KB5 322 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 ZDHHC15Q96MV8 337 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 SPATA33Q96N06 139 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 MFSD1Q9H3U5 465 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 CATSPERBQ9H7T0 1116 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 USP40Q9NVE5 1235 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 SAR1BQ9Y6B6 198 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 SBF2Q86WG5 1849 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 TARSL2A2RTX5 802 aaKnown RBP2.88□□□□□ -1.95
CHD9-202ENST00000398510 URADA6NGE7 173 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 GSTA4O15217 222 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 DGAT1O75907 488 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 ATP5BP06576 529 aaKnown RBP2.88□□□□□ -1.95
CHD9-202ENST00000398510 ADCY8P40145 1251 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 ZAP70P43403 619 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 MRPS15P82914 257 aaKnown RBP2.88□□□□□ -1.95
CHD9-202ENST00000398510 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.88□□□□□ -1.95
CHD9-202ENST00000398510 MAD2L1Q13257 205 aaPredicted RBP2.88□□□□□ -1.95
CHD9-202ENST00000398510 WHAMMP3Q1A5X7 153 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 TRIM60Q495X7 471 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 KLHL26Q53HC5 615 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 ANO1Q5XXA6 986 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 ZCCHC8Q6NZY4 707 aaKnown RBP2.88□□□□□ -1.95
CHD9-202ENST00000398510 BHLHB9Q6PI77 547 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 TRIM65Q6PJ69 517 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 RAPH1Q70E73 1250 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 ZNF654Q8IZM8 581 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 AFAP1L1Q8TED9 768 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 SHDQ96IW2 340 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 USP28Q96RU2 1077 aa2.88□□□□□ -1.95
CHD9-202ENST00000398510 APOL6Q9BWW8 343 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms