RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 GMFBP60983 142 aa13.51□□□□□ -0.25
CCBE1-201ENST00000398179 C6orf183Q5T699 404 aa13.51□□□□□ -0.25
CCBE1-201ENST00000398179 AKAP1Q92667 903 aaKnown RBP eCLIP13.51□□□□□ -0.25
CCBE1-201ENST00000398179 CITED4Q96RK1 184 aa13.51□□□□□ -0.25
CCBE1-201ENST00000398179 INPPL1O15357 1258 aa13.51□□□□□ -0.25
CCBE1-201ENST00000398179 CACNA2D1P54289 1103 aa13.51□□□□□ -0.25
CCBE1-201ENST00000398179 MDM2Q00987 491 aaPredicted RBP13.51□□□□□ -0.25
CCBE1-201ENST00000398179 TMED2Q15363 201 aa13.51□□□□□ -0.25
CCBE1-201ENST00000398179 CCDC85BQ15834 202 aaPredicted RBP13.51□□□□□ -0.25
CCBE1-201ENST00000398179 Q6ZUG5 572 aa13.51□□□□□ -0.25
CCBE1-201ENST00000398179 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.51□□□□□ -0.25
CCBE1-201ENST00000398179 ESYT1Q9BSJ8 1104 aa13.51□□□□□ -0.25
CCBE1-201ENST00000398179 GMNCA6NCL1 334 aa13.51□□□□□ -0.25
CCBE1-201ENST00000398179 STX16-NPEPL1H3BU86 382 aa13.51□□□□□ -0.25
CCBE1-201ENST00000398179 RNF103O00237 685 aa13.51□□□□□ -0.25
CCBE1-201ENST00000398179 SPTLC2O15270 562 aa13.51□□□□□ -0.25
CCBE1-201ENST00000398179 CDC25BP30305 580 aa13.51□□□□□ -0.25
CCBE1-201ENST00000398179 PDZK1Q5T2W1 519 aa13.51□□□□□ -0.25
CCBE1-201ENST00000398179 E4F1Q66K89 784 aaPredicted RBP13.51□□□□□ -0.25
CCBE1-201ENST00000398179 TAF8Q7Z7C8 310 aa13.51□□□□□ -0.25
CCBE1-201ENST00000398179 ZNF713Q8N859 430 aaPredicted RBP13.51□□□□□ -0.25
CCBE1-201ENST00000398179 VAT1LQ9HCJ6 419 aa13.51□□□□□ -0.25
CCBE1-201ENST00000398179 HMG20AQ9NP66 347 aa13.51□□□□□ -0.25
CCBE1-201ENST00000398179 KLF15Q9UIH9 416 aa13.51□□□□□ -0.25
CCBE1-201ENST00000398179 PCDHB15Q9Y5E8 787 aa13.51□□□□□ -0.25
CCBE1-201ENST00000398179 GRID2IPA4D2P6 1211 aa13.5□□□□□ -0.25
CCBE1-201ENST00000398179 TRDMT1O14717 391 aaKnown RBP13.5□□□□□ -0.25
CCBE1-201ENST00000398179 ARIH2O95376 493 aa13.5□□□□□ -0.25
CCBE1-201ENST00000398179 ABATP80404 500 aa13.5□□□□□ -0.25
CCBE1-201ENST00000398179 SNAP47Q5SQN1 464 aa13.5□□□□□ -0.25
CCBE1-201ENST00000398179 TCEAL3Q969E4 200 aa13.5□□□□□ -0.25
CCBE1-201ENST00000398179 ASIC3Q9UHC3 531 aa13.5□□□□□ -0.25
CCBE1-201ENST00000398179 NMT2O60551 498 aa13.5□□□□□ -0.25
CCBE1-201ENST00000398179 SIN3BO75182 1162 aa13.5□□□□□ -0.25
CCBE1-201ENST00000398179 CD4P01730 458 aa13.5□□□□□ -0.25
CCBE1-201ENST00000398179 PSMD4P55036 377 aaKnown RBP13.5□□□□□ -0.25
CCBE1-201ENST00000398179 DSG1Q02413 1049 aa13.5□□□□□ -0.25
CCBE1-201ENST00000398179 KSR1Q8IVT5 923 aa13.5□□□□□ -0.25
CCBE1-201ENST00000398179 DENND6BQ8NEG7 585 aa13.5□□□□□ -0.25
CCBE1-201ENST00000398179 SH3TC2Q8TF17 1288 aa13.5□□□□□ -0.25
CCBE1-201ENST00000398179 DDX17Q92841 729 aaKnown RBP13.5□□□□□ -0.25
CCBE1-201ENST00000398179 SIPA1Q96FS4 1042 aa13.5□□□□□ -0.25
CCBE1-201ENST00000398179 SELENONQ9NZV5 590 aa13.5□□□□□ -0.25
CCBE1-201ENST00000398179 CDC27P30260 824 aa13.5□□□□□ -0.25
CCBE1-201ENST00000398179 Q3ZCU0 254 aa13.5□□□□□ -0.25
CCBE1-201ENST00000398179 EPM2AIP1Q7L775 607 aaPredicted RBP13.5□□□□□ -0.25
CCBE1-201ENST00000398179 NCOA7Q8NI08 942 aa13.5□□□□□ -0.25
CCBE1-201ENST00000398179 WDR36Q8NI36 951 aaKnown RBP13.5□□□□□ -0.25
CCBE1-201ENST00000398179 TCEAL7Q9BRU2 100 aa13.5□□□□□ -0.25
CCBE1-201ENST00000398179 POLR3HQ9Y535 204 aaPredicted RBP13.5□□□□□ -0.25
CCBE1-201ENST00000398179 O00370 1275 aa13.5□□□□□ -0.25
CCBE1-201ENST00000398179 CRYZL1O95825 349 aa13.5□□□□□ -0.25
CCBE1-201ENST00000398179 AGR2O95994 175 aa13.5□□□□□ -0.25
CCBE1-201ENST00000398179 CSF2RAP15509 400 aa13.5□□□□□ -0.25
CCBE1-201ENST00000398179 WARSP23381 471 aaKnown RBP13.5□□□□□ -0.25
CCBE1-201ENST00000398179 GUCY2DQ02846 1103 aa13.5□□□□□ -0.25
CCBE1-201ENST00000398179 SNRNP48Q6IEG0 339 aaKnown RBP13.5□□□□□ -0.25
CCBE1-201ENST00000398179 USP13Q92995 863 aaPredicted RBP13.5□□□□□ -0.25
CCBE1-201ENST00000398179 C18orf25Q96B23 403 aaPredicted RBP13.5□□□□□ -0.25
CCBE1-201ENST00000398179 JPH4Q96JJ6 628 aa13.5□□□□□ -0.25
CCBE1-201ENST00000398179 BARD1Q99728 777 aaKnown RBP13.5□□□□□ -0.25
CCBE1-201ENST00000398179 TINF2Q9BSI4 451 aa13.5□□□□□ -0.25
CCBE1-201ENST00000398179 IL33O95760 270 aa13.49□□□□□ -0.25
CCBE1-201ENST00000398179 CSF1RP07333 972 aa13.49□□□□□ -0.25
CCBE1-201ENST00000398179 ENDOUP21128 410 aaKnown RBP13.49□□□□□ -0.25
CCBE1-201ENST00000398179 SLCO1A2P46721 670 aa13.49□□□□□ -0.25
CCBE1-201ENST00000398179 PHC1P78364 1004 aa13.49□□□□□ -0.25
CCBE1-201ENST00000398179 BEGAINQ9BUH8 593 aa13.49□□□□□ -0.25
CCBE1-201ENST00000398179 NEK6Q9HC98 313 aa13.49□□□□□ -0.25
CCBE1-201ENST00000398179 RAB19A4D1S5 217 aa13.49□□□□□ -0.25
CCBE1-201ENST00000398179 PPP6R2O75170 966 aa13.49□□□□□ -0.25
CCBE1-201ENST00000398179 ADKP55263 362 aaKnown RBP13.49□□□□□ -0.25
CCBE1-201ENST00000398179 KMT5BQ4FZB7 885 aa13.49□□□□□ -0.25
CCBE1-201ENST00000398179 LNX2Q8N448 690 aa13.49□□□□□ -0.25
CCBE1-201ENST00000398179 GAKO14976 1311 aa13.49□□□□□ -0.25
CCBE1-201ENST00000398179 ETF1P62495 437 aaKnown RBP13.49□□□□□ -0.25
CCBE1-201ENST00000398179 MAP3K12Q12852 859 aa13.49□□□□□ -0.25
CCBE1-201ENST00000398179 H3BM21 787 aa13.49□□□□□ -0.25
CCBE1-201ENST00000398179 TRIM24O15164 1050 aa13.49□□□□□ -0.25
CCBE1-201ENST00000398179 OR5T1Q8NG75 326 aa13.49□□□□□ -0.25
CCBE1-201ENST00000398179 RNF41Q9H4P4 317 aaPredicted RBP13.49□□□□□ -0.25
CCBE1-201ENST00000398179 MRPS23Q9Y3D9 190 aaKnown RBP13.49□□□□□ -0.25
CCBE1-201ENST00000398179 B8ZZF3 427 aa13.49□□□□□ -0.25
CCBE1-201ENST00000398179 ASIC1P78348 528 aa13.49□□□□□ -0.25
CCBE1-201ENST00000398179 GLYCTKQ8IVS8 523 aa13.49□□□□□ -0.25
CCBE1-201ENST00000398179 ZNF444Q8N0Y2 327 aaPredicted RBP13.49□□□□□ -0.25
CCBE1-201ENST00000398179 IQUBQ8NA54 791 aa13.49□□□□□ -0.25
CCBE1-201ENST00000398179 GANCQ8TET4 914 aa13.49□□□□□ -0.25
CCBE1-201ENST00000398179 HDAC2Q92769 488 aaKnown RBP13.49□□□□□ -0.25
CCBE1-201ENST00000398179 CCDC134Q9H6E4 229 aa13.49□□□□□ -0.25
CCBE1-201ENST00000398179 NDUFAF4Q9P032 175 aa13.49□□□□□ -0.25
CCBE1-201ENST00000398179 PLAAQ9Y263 795 aa13.49□□□□□ -0.25
CCBE1-201ENST00000398179 NCOA2Q15596 1464 aa13.49□□□□□ -0.25
CCBE1-201ENST00000398179 MAPK4P31152 587 aa13.48□□□□□ -0.25
CCBE1-201ENST00000398179 PLD1Q13393 1074 aa13.48□□□□□ -0.25
CCBE1-201ENST00000398179 ARMC4Q5T2S8 1044 aa13.48□□□□□ -0.25
CCBE1-201ENST00000398179 ENKURQ8TC29 256 aa13.48□□□□□ -0.25
CCBE1-201ENST00000398179 EPN3Q9H201 632 aa13.48□□□□□ -0.25
CCBE1-201ENST00000398179 PRDM11Q9NQV5 511 aa13.48□□□□□ -0.25
CCBE1-201ENST00000398179 HPF1Q9NWY4 346 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms