RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 KRT39Q6A163 491 aa11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 MIGA2Q7L4E1 593 aa11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 CCDC110Q8TBZ0 833 aa11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 MAML1Q92585 1016 aa11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 ELMO3Q96BJ8 720 aa11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 TRIM11Q96F44 468 aa11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 TMEM117Q9H0C3 514 aa11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 NPHS2Q9NP85 383 aa11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 HSPBP1Q9NZL4 362 aa11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 USH1CQ9Y6N9 552 aa11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 OPHN1O60890 802 aa11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 CRKP46108 304 aa11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 PDIA2Q13087 525 aaKnown RBP11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 P3H1Q32P28 736 aa11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 ZCWPW2Q504Y3 356 aa11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 ZNF394Q53GI3 561 aa11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 DUPD1Q68J44 220 aa11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 APBB1IPQ7Z5R6 666 aaPredicted RBP11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 ANKMY2Q8IV38 441 aa11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 HES6Q96HZ4 224 aa11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 CEP170P1Q96L14 293 aa11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 TRIM55Q9BYV6 548 aa11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 COA1Q9GZY4 146 aa11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 KIF9Q9HAQ2 790 aa11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 ACP6Q9NPH0 428 aa11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 M0R2N6 131 aa11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 RARAP10276 462 aa11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 CEP55Q53EZ4 464 aa11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 SLC10A5Q5PT55 438 aa11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 CYFIP1Q7L576 1253 aa11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 TBC1D16Q8TBP0 767 aa11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 CCT6BQ92526 530 aa11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 KLF6Q99612 283 aaPredicted RBP11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 MCM8Q9UJA3 840 aa11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 HAUS5O94927 633 aa11.83□□□□□ -0.52
CSGALNACT1-202ENST00000397998 EIF2AK2P19525 551 aaKnown RBP11.83□□□□□ -0.52
CSGALNACT1-202ENST00000397998 XRCC4Q13426 336 aa11.83□□□□□ -0.52
CSGALNACT1-202ENST00000397998 LRRC57Q8N9N7 239 aa11.83□□□□□ -0.52
CSGALNACT1-202ENST00000397998 TUFT1Q9NNX1 390 aa11.83□□□□□ -0.52
CSGALNACT1-202ENST00000397998 UBN1Q9NPG3 1134 aa11.83□□□□□ -0.52
CSGALNACT1-202ENST00000397998 UVRAGQ9P2Y5 699 aa11.83□□□□□ -0.52
CSGALNACT1-202ENST00000397998 MYH2Q9UKX2 1941 aa11.83□□□□□ -0.52
CSGALNACT1-202ENST00000397998 LRRIQ4A6NIV6 560 aa11.83□□□□□ -0.52
CSGALNACT1-202ENST00000397998 UBAP1LF5GYI3 381 aa11.83□□□□□ -0.52
CSGALNACT1-202ENST00000397998 EIF3DO15371 548 aaKnown RBP eCLIP11.83□□□□□ -0.52
CSGALNACT1-202ENST00000397998 ARSEP51690 589 aa11.83□□□□□ -0.52
CSGALNACT1-202ENST00000397998 RNASELQ05823 741 aaKnown RBP11.83□□□□□ -0.52
CSGALNACT1-202ENST00000397998 AUHQ13825 339 aaKnown RBP11.83□□□□□ -0.52
CSGALNACT1-202ENST00000397998 CNGA2Q16280 664 aa11.83□□□□□ -0.52
CSGALNACT1-202ENST00000397998 CFAP157Q5JU67 520 aa11.83□□□□□ -0.52
CSGALNACT1-202ENST00000397998 PRELID2Q8N945 189 aa11.83□□□□□ -0.52
CSGALNACT1-202ENST00000397998 C1orf131Q8NDD1 294 aaKnown RBP11.83□□□□□ -0.52
CSGALNACT1-202ENST00000397998 CBWD1Q9BRT8 395 aa11.83□□□□□ -0.52
CSGALNACT1-202ENST00000397998 TXNDC16Q9P2K2 825 aa11.83□□□□□ -0.52
CSGALNACT1-202ENST00000397998 CNOT7Q9UIV1 285 aaKnown RBP11.83□□□□□ -0.52
CSGALNACT1-202ENST00000397998 PNMA3Q9UL41 463 aa11.83□□□□□ -0.52
CSGALNACT1-202ENST00000397998 TRIM33Q9UPN9 1127 aa11.83□□□□□ -0.52
CSGALNACT1-202ENST00000397998 GTPBP10A4D1E9 387 aaKnown RBP11.83□□□□□ -0.52
CSGALNACT1-202ENST00000397998 TLR3O15455 904 aaKnown RBP11.83□□□□□ -0.52
CSGALNACT1-202ENST00000397998 KRT19P08727 400 aa11.83□□□□□ -0.52
CSGALNACT1-202ENST00000397998 MAGEA4P43358 317 aa11.83□□□□□ -0.52
CSGALNACT1-202ENST00000397998 NFIAQ12857 509 aa11.83□□□□□ -0.52
CSGALNACT1-202ENST00000397998 ARSHQ5FYA8 562 aa11.83□□□□□ -0.52
CSGALNACT1-202ENST00000397998 TMEM270Q6UE05 265 aa11.83□□□□□ -0.52
CSGALNACT1-202ENST00000397998 FBXL13Q8NEE6 735 aa11.83□□□□□ -0.52
CSGALNACT1-202ENST00000397998 FAM213AQ9BRX8 229 aa11.83□□□□□ -0.52
CSGALNACT1-202ENST00000397998 TDRD3Q9H7E2 651 aaKnown RBP11.83□□□□□ -0.52
CSGALNACT1-202ENST00000397998 LAMA4Q16363 1823 aa11.83□□□□□ -0.52
CSGALNACT1-202ENST00000397998 ARFGEF2Q9Y6D5 1785 aa11.82□□□□□ -0.52
CSGALNACT1-202ENST00000397998 DENND3A2RUS2 1198 aa11.82□□□□□ -0.52
CSGALNACT1-202ENST00000397998 BTNL10A8MVZ5 291 aa11.82□□□□□ -0.52
CSGALNACT1-202ENST00000397998 FAM86B1E9PN63 330 aa11.82□□□□□ -0.52
CSGALNACT1-202ENST00000397998 FAM86B2P0C5J1 330 aa11.82□□□□□ -0.52
CSGALNACT1-202ENST00000397998 RALAP11233 206 aa11.82□□□□□ -0.52
CSGALNACT1-202ENST00000397998 LGSNQ5TDP6 509 aa11.82□□□□□ -0.52
CSGALNACT1-202ENST00000397998 DNAJC24Q6P3W2 148 aa11.82□□□□□ -0.52
CSGALNACT1-202ENST00000397998 CASC4Q6P4E1 433 aa11.82□□□□□ -0.52
CSGALNACT1-202ENST00000397998 RHOT1Q8IXI2 618 aa11.82□□□□□ -0.52
CSGALNACT1-202ENST00000397998 CENPTQ96BT3 561 aa11.82□□□□□ -0.52
CSGALNACT1-202ENST00000397998 PI4K2AQ9BTU6 479 aa11.82□□□□□ -0.52
CSGALNACT1-202ENST00000397998 MAP3K7O43318 606 aa11.82□□□□□ -0.52
CSGALNACT1-202ENST00000397998 IRX4P78413 519 aa11.82□□□□□ -0.52
CSGALNACT1-202ENST00000397998 IRX1P78414 480 aaPredicted RBP11.82□□□□□ -0.52
CSGALNACT1-202ENST00000397998 NR1H3Q13133 447 aa11.82□□□□□ -0.52
CSGALNACT1-202ENST00000397998 CDC42EP5Q6NZY7 148 aa11.82□□□□□ -0.52
CSGALNACT1-202ENST00000397998 AGGF1Q8N302 714 aaeCLIP11.82□□□□□ -0.52
CSGALNACT1-202ENST00000397998 DEPTORQ8TB45 409 aa11.82□□□□□ -0.52
CSGALNACT1-202ENST00000397998 KAT5Q92993 513 aa11.82□□□□□ -0.52
CSGALNACT1-202ENST00000397998 TMEM237Q96Q45 408 aa11.82□□□□□ -0.52
CSGALNACT1-202ENST00000397998 RPS6KC1Q96S38 1066 aa11.82□□□□□ -0.52
CSGALNACT1-202ENST00000397998 EML1O00423 815 aa11.82□□□□□ -0.52
CSGALNACT1-202ENST00000397998 TTC4O95801 387 aa11.82□□□□□ -0.52
CSGALNACT1-202ENST00000397998 BSPRYQ5W0U4 402 aa11.82□□□□□ -0.52
CSGALNACT1-202ENST00000397998 ZNF720Q7Z2F6 126 aa11.82□□□□□ -0.52
CSGALNACT1-202ENST00000397998 SLC47A2Q86VL8 602 aa11.82□□□□□ -0.52
CSGALNACT1-202ENST00000397998 ZBTB10Q96DT7 871 aa11.82□□□□□ -0.52
CSGALNACT1-202ENST00000397998 FAM81BQ96LP2 452 aa11.82□□□□□ -0.52
CSGALNACT1-202ENST00000397998 OSBPL8Q9BZF1 889 aa11.82□□□□□ -0.52
CSGALNACT1-202ENST00000397998 GTF3C4Q9UKN8 822 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms