RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 SEL1LQ9UBV2 794 aa12.03□□□□□ -0.48
TTC28-201ENST00000397906 FAN1Q9Y2M0 1017 aa12.03□□□□□ -0.48
TTC28-201ENST00000397906 USH1CQ9Y6N9 552 aa12.03□□□□□ -0.48
TTC28-201ENST00000397906 GAS2L3Q86XJ1 694 aa12.03□□□□□ -0.48
TTC28-201ENST00000397906 DDIASQ8IXT1 998 aa12.03□□□□□ -0.48
TTC28-201ENST00000397906 TUFT1Q9NNX1 390 aa12.03□□□□□ -0.48
TTC28-201ENST00000397906 APOL1O14791 398 aa12.03□□□□□ -0.48
TTC28-201ENST00000397906 FOXN1O15353 648 aa12.03□□□□□ -0.48
TTC28-201ENST00000397906 YY1P25490 414 aa12.03□□□□□ -0.48
TTC28-201ENST00000397906 AKT1P31749 480 aa12.03□□□□□ -0.48
TTC28-201ENST00000397906 XKR3Q5GH77 459 aa12.03□□□□□ -0.48
TTC28-201ENST00000397906 ITPRIPL1Q6GPH6 555 aa12.03□□□□□ -0.48
TTC28-201ENST00000397906 C17orf102A2RUQ5 167 aa12.02□□□□□ -0.48
TTC28-201ENST00000397906 ETFBP38117 255 aa12.02□□□□□ -0.48
TTC28-201ENST00000397906 TEKT4Q8WW24 435 aa12.02□□□□□ -0.48
TTC28-201ENST00000397906 C1orf54Q8WWF1 131 aa12.02□□□□□ -0.48
TTC28-201ENST00000397906 SRPK1Q96SB4 655 aaKnown RBP12.02□□□□□ -0.48
TTC28-201ENST00000397906 ATP11BQ9Y2G3 1177 aa12.02□□□□□ -0.48
TTC28-201ENST00000397906 L3MBTL1Q9Y468 752 aa12.02□□□□□ -0.48
TTC28-201ENST00000397906 FRMD3A2A2Y4 597 aa12.02□□□□□ -0.48
TTC28-201ENST00000397906 KCNN4O15554 427 aa12.02□□□□□ -0.48
TTC28-201ENST00000397906 LRG1P02750 347 aa12.02□□□□□ -0.48
TTC28-201ENST00000397906 ARID5BQ14865 1188 aa12.02□□□□□ -0.48
TTC28-201ENST00000397906 SLC13A1Q9BZW2 595 aa12.02□□□□□ -0.48
TTC28-201ENST00000397906 TCF7P36402 384 aaPredicted RBP12.02□□□□□ -0.48
TTC28-201ENST00000397906 GLRA4Q5JXX5 417 aa12.02□□□□□ -0.48
TTC28-201ENST00000397906 TADA2BQ86TJ2 420 aa12.02□□□□□ -0.48
TTC28-201ENST00000397906 PIP4K2CQ8TBX8 421 aa12.02□□□□□ -0.48
TTC28-201ENST00000397906 REEP2Q9BRK0 252 aa12.02□□□□□ -0.48
TTC28-201ENST00000397906 STMN1P16949 149 aa12.02□□□□□ -0.49
TTC28-201ENST00000397906 DEFB128Q7Z7B8 93 aa12.02□□□□□ -0.49
TTC28-201ENST00000397906 AIPL1Q9NZN9 384 aa12.02□□□□□ -0.49
TTC28-201ENST00000397906 TWF1Q12792 350 aa12.02□□□□□ -0.49
TTC28-201ENST00000397906 ZC2HC1CQ53FD0 456 aaPredicted RBP12.02□□□□□ -0.49
TTC28-201ENST00000397906 COBLL1Q53SF7 1204 aa12.02□□□□□ -0.49
TTC28-201ENST00000397906 COL23A1Q86Y22 540 aaPredicted RBP12.02□□□□□ -0.49
TTC28-201ENST00000397906 PPM1NQ8N819 430 aa12.02□□□□□ -0.49
TTC28-201ENST00000397906 SH3TC2Q8TF17 1288 aa12.02□□□□□ -0.49
TTC28-201ENST00000397906 RABGGTAQ92696 567 aa12.02□□□□□ -0.49
TTC28-201ENST00000397906 PANX2Q96RD6 677 aa12.02□□□□□ -0.49
TTC28-201ENST00000397906 CPA4Q9UI42 421 aa12.02□□□□□ -0.49
TTC28-201ENST00000397906 ORC4O43929 436 aa12.02□□□□□ -0.49
TTC28-201ENST00000397906 WHAMMQ8TF30 809 aa12.02□□□□□ -0.49
TTC28-201ENST00000397906 CCDC138Q96M89 665 aa12.02□□□□□ -0.49
TTC28-201ENST00000397906 MED4Q9NPJ6 270 aa12.02□□□□□ -0.49
TTC28-201ENST00000397906 ABCA6Q8N139 1617 aa12.02□□□□□ -0.49
TTC28-201ENST00000397906 SLC25A27O95847 323 aa12.02□□□□□ -0.49
TTC28-201ENST00000397906 CUL4AQ13619 759 aa12.02□□□□□ -0.49
TTC28-201ENST00000397906 KYAT1Q16773 422 aa12.02□□□□□ -0.49
TTC28-201ENST00000397906 ABI2Q9NYB9 513 aaPredicted RBP12.02□□□□□ -0.49
TTC28-201ENST00000397906 NLRP11P59045 1033 aaKnown RBP12.02□□□□□ -0.49
TTC28-201ENST00000397906 GTF2H3Q13889 308 aa12.02□□□□□ -0.49
TTC28-201ENST00000397906 HHIPL2Q6UWX4 724 aa12.02□□□□□ -0.49
TTC28-201ENST00000397906 CRLF3Q8IUI8 442 aa12.02□□□□□ -0.49
TTC28-201ENST00000397906 VCPKMTQ9H867 229 aa12.02□□□□□ -0.49
TTC28-201ENST00000397906 MLXIPLQ9NP71 852 aa12.02□□□□□ -0.49
TTC28-201ENST00000397906 SUFUQ9UMX1 484 aa12.02□□□□□ -0.49
TTC28-201ENST00000397906 RGL2O15211 777 aa12.02□□□□□ -0.49
TTC28-201ENST00000397906 PID1Q7Z2X4 250 aa12.02□□□□□ -0.49
TTC28-201ENST00000397906 EYA4O95677 639 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 HSD17B4P51659 736 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 RBP5P82980 135 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 FASTKD1Q53R41 847 aaKnown RBP12.01□□□□□ -0.49
TTC28-201ENST00000397906 ATF7IP2Q5U623 682 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 TTC13Q8NBP0 860 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 GIPC2Q8TF65 315 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 FAM151AQ8WW52 585 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 ATP11CQ8NB49 1132 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 ERAP1Q9NZ08 941 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 FBXL5Q9UKA1 691 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 NTSR2O95665 410 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 PDHBP11177 359 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 APBA1Q02410 837 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 NFRKBQ6P4R8 1299 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 FAM47EQ6ZV65 393 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 C16orf86Q6ZW13 317 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 SEPT1Q8WYJ6 367 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 MID2Q9UJV3 735 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 PLAAQ9Y263 795 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 OCM2P0CE71 109 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 OCMP0CE72 109 aaPredicted RBP12.01□□□□□ -0.49
TTC28-201ENST00000397906 PDIA2Q13087 525 aaKnown RBP12.01□□□□□ -0.49
TTC28-201ENST00000397906 GLT1D1Q96MS3 346 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 EPAS1Q99814 870 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 FAM205CA6NFA0 338 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 LGALS16A8MUM7 142 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 RPS12P25398 132 aaKnown RBP12.01□□□□□ -0.49
TTC28-201ENST00000397906 C10orf120Q5SQS8 335 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 GSPT2Q8IYD1 628 aaKnown RBP12.01□□□□□ -0.49
TTC28-201ENST00000397906 DGAT1O75907 488 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 RGS2P41220 211 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 TKFCQ3LXA3 575 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 CYTH2Q99418 400 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 TRIM62Q9BVG3 475 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 MAP4P27816 1152 aaKnown RBP12.01□□□□□ -0.49
TTC28-201ENST00000397906 EFHBQ8N7U6 833 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 SLC26A7Q8TE54 656 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 HASPINQ8TF76 798 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 XAB2Q9HCS7 855 aaKnown RBP12.01□□□□□ -0.49
TTC28-201ENST00000397906 E2F6O75461 281 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms