RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 C1orf228Q6PIY5 440 aa11.91□□□□□ -0.5
IFT140-202ENST00000397417 SH2D3CQ8N5H7 860 aa11.91□□□□□ -0.5
IFT140-202ENST00000397417 TATDN2Q93075 761 aa11.91□□□□□ -0.5
IFT140-202ENST00000397417 HES2Q9Y543 173 aa11.91□□□□□ -0.5
IFT140-202ENST00000397417 TIMM13Q9Y5L4 95 aaPredicted RBP11.91□□□□□ -0.5
IFT140-202ENST00000397417 N4BP2Q86UW6 1770 aaPredicted RBP11.91□□□□□ -0.5
IFT140-202ENST00000397417 SPDYE16A6NNV3 312 aaPredicted RBP11.91□□□□□ -0.5
IFT140-202ENST00000397417 HUS1O60921 280 aa11.91□□□□□ -0.5
IFT140-202ENST00000397417 SGPL1O95470 568 aa11.91□□□□□ -0.5
IFT140-202ENST00000397417 LDHAP00338 332 aaKnown RBP11.91□□□□□ -0.5
IFT140-202ENST00000397417 KCNT1Q5JUK3 1230 aa11.91□□□□□ -0.5
IFT140-202ENST00000397417 CENPPQ6IPU0 288 aa11.91□□□□□ -0.5
IFT140-202ENST00000397417 RUFY4Q6ZNE9 571 aa11.91□□□□□ -0.5
IFT140-202ENST00000397417 GMCL1P1Q8NEA9 526 aa11.91□□□□□ -0.5
IFT140-202ENST00000397417 RPGRIP1Q96KN7 1286 aa11.91□□□□□ -0.5
IFT140-202ENST00000397417 MMTAG2Q9BU76 263 aaKnown RBP11.91□□□□□ -0.5
IFT140-202ENST00000397417 KIAA1683Q9H0B3 1180 aa11.91□□□□□ -0.5
IFT140-202ENST00000397417 MRPL47Q9HD33 250 aaKnown RBP11.91□□□□□ -0.5
IFT140-202ENST00000397417 RBM12Q9NTZ6 932 aaKnown RBP11.91□□□□□ -0.5
IFT140-202ENST00000397417 INTS13Q9NVM9 706 aa11.91□□□□□ -0.5
IFT140-202ENST00000397417 G3BP2Q9UN86 482 aaKnown RBP11.91□□□□□ -0.5
IFT140-202ENST00000397417 MRFAP1Q9Y605 127 aa11.91□□□□□ -0.5
IFT140-202ENST00000397417 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.91□□□□□ -0.5
IFT140-202ENST00000397417 ITGB3P05106 788 aa11.9□□□□□ -0.5
IFT140-202ENST00000397417 PON1P27169 355 aa11.9□□□□□ -0.5
IFT140-202ENST00000397417 DLG4P78352 724 aa11.9□□□□□ -0.5
IFT140-202ENST00000397417 TMEM132BQ14DG7 1078 aa11.9□□□□□ -0.5
IFT140-202ENST00000397417 TMED2Q15363 201 aa11.9□□□□□ -0.5
IFT140-202ENST00000397417 E2F4Q16254 413 aa11.9□□□□□ -0.5
IFT140-202ENST00000397417 ZSCAN26Q16670 478 aa11.9□□□□□ -0.5
IFT140-202ENST00000397417 MICALCLQ6ZW33 695 aa11.9□□□□□ -0.5
IFT140-202ENST00000397417 ZNF720Q7Z2F6 126 aa11.9□□□□□ -0.5
IFT140-202ENST00000397417 FMO2Q99518 471 aa11.9□□□□□ -0.5
IFT140-202ENST00000397417 SYT17Q9BSW7 474 aa11.9□□□□□ -0.5
IFT140-202ENST00000397417 SMARCAD1Q9H4L7 1026 aa11.9□□□□□ -0.5
IFT140-202ENST00000397417 AGO4Q9HCK5 861 aaKnown RBP11.9□□□□□ -0.5
IFT140-202ENST00000397417 ANAPC5Q9UJX4 755 aa11.9□□□□□ -0.5
IFT140-202ENST00000397417 NOC2LQ9Y3T9 749 aaKnown RBP11.9□□□□□ -0.5
IFT140-202ENST00000397417 KIF1AQ12756 1690 aa11.9□□□□□ -0.5
IFT140-202ENST00000397417 CCDC151A5D8V7 595 aa11.9□□□□□ -0.5
IFT140-202ENST00000397417 TTI1O43156 1089 aa11.9□□□□□ -0.5
IFT140-202ENST00000397417 ATP8B1O43520 1251 aa11.9□□□□□ -0.5
IFT140-202ENST00000397417 SMARCA1P28370 1054 aa11.9□□□□□ -0.5
IFT140-202ENST00000397417 DSG3P32926 999 aa11.9□□□□□ -0.5
IFT140-202ENST00000397417 TUBB4BP68371 445 aa11.9□□□□□ -0.5
IFT140-202ENST00000397417 PDCLQ13371 301 aa11.9□□□□□ -0.5
IFT140-202ENST00000397417 ATF7IP2Q5U623 682 aa11.9□□□□□ -0.5
IFT140-202ENST00000397417 CCDC125Q86Z20 511 aa11.9□□□□□ -0.5
IFT140-202ENST00000397417 RBBP8NLQ8NC74 664 aaPredicted RBP11.9□□□□□ -0.5
IFT140-202ENST00000397417 MCUQ8NE86 351 aa11.9□□□□□ -0.5
IFT140-202ENST00000397417 ACAP3Q96P50 834 aa11.9□□□□□ -0.5
IFT140-202ENST00000397417 ZNF446Q9NWS9 450 aa11.9□□□□□ -0.5
IFT140-202ENST00000397417 ODF2LQ9ULJ1 636 aa11.9□□□□□ -0.5
IFT140-202ENST00000397417 NDC80O14777 642 aa11.9□□□□□ -0.5
IFT140-202ENST00000397417 GTF2H1P32780 548 aa11.9□□□□□ -0.5
IFT140-202ENST00000397417 CDH8P55286 799 aa11.9□□□□□ -0.5
IFT140-202ENST00000397417 SLC35G1Q2M3R5 365 aa11.9□□□□□ -0.5
IFT140-202ENST00000397417 RNPC3Q96LT9 517 aaKnown RBP11.9□□□□□ -0.5
IFT140-202ENST00000397417 GCOM2Q9BZD3 368 aaPredicted RBP11.9□□□□□ -0.5
IFT140-202ENST00000397417 C2CD2LO14523 706 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 HMBSP08397 361 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 MMEP08473 750 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 CLUL1Q15846 466 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 MCEEQ96PE7 176 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 TRIM7Q9C029 511 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 DHX35Q9H5Z1 703 aaKnown RBP11.89□□□□□ -0.51
IFT140-202ENST00000397417 PDGFCQ9NRA1 345 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 GINM1Q9NU53 330 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 CRYBG1Q9Y4K1 1723 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 ZSCAN5CA6NGD5 496 aaPredicted RBP11.89□□□□□ -0.51
IFT140-202ENST00000397417 INSRRP14616 1297 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 AKAP5P24588 427 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 ZNF131P52739 623 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 TNFAIP2Q03169 654 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 SLC47A2Q86VL8 602 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 CCDC117Q8IWD4 279 aaPredicted RBP11.89□□□□□ -0.51
IFT140-202ENST00000397417 ERAP1Q9NZ08 941 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 TSR3Q9UJK0 312 aaKnown RBP11.89□□□□□ -0.51
IFT140-202ENST00000397417 FIS1Q9Y3D6 152 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 RGPD5Q99666 1765 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 GH1P01241 217 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 SARSP49591 514 aaKnown RBP11.89□□□□□ -0.51
IFT140-202ENST00000397417 BCAR1P56945 870 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 ORC2Q13416 577 aaPredicted RBP11.89□□□□□ -0.51
IFT140-202ENST00000397417 ALCAMQ13740 583 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 UGCGQ16739 394 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 CFAP157Q5JU67 520 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 KIAA1755Q5JYT7 1200 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 VSIG1Q86XK7 387 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 TRIM59Q8IWR1 403 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 GPC2Q8N158 579 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 ATG4AQ8WYN0 398 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 AGAP3Q96P47 875 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 MTMR9Q96QG7 549 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 CAMKK2Q96RR4 588 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 POLR3CQ9BUI4 534 aaPredicted RBP11.89□□□□□ -0.51
IFT140-202ENST00000397417 MKRN1Q9UHC7 482 aaKnown RBP11.89□□□□□ -0.51
IFT140-202ENST00000397417 FEZ2Q9UHY8 353 aaPredicted RBP11.89□□□□□ -0.51
IFT140-202ENST00000397417 STK38LQ9Y2H1 464 aa11.89□□□□□ -0.51
IFT140-202ENST00000397417 SART1O43290 800 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms