RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 GDAP1Q8TB36 358 aa14.95□□□□□ -0.02
NUP98-204ENST00000397004 DDX1Q92499 740 aaKnown RBP14.95□□□□□ -0.02
NUP98-204ENST00000397004 ARHGEF2Q92974 986 aaKnown RBP14.95□□□□□ -0.02
NUP98-204ENST00000397004 PODXLO00592 558 aa14.94□□□□□ -0.02
NUP98-204ENST00000397004 SKAP2O75563 359 aaPredicted RBP14.94□□□□□ -0.02
NUP98-204ENST00000397004 MYO1EQ12965 1108 aa14.94□□□□□ -0.02
NUP98-204ENST00000397004 ASRGL1Q7L266 308 aa14.94□□□□□ -0.02
NUP98-204ENST00000397004 PHLDB2Q86SQ0 1253 aa14.94□□□□□ -0.02
NUP98-204ENST00000397004 GMCL1P1Q8NEA9 526 aa14.94□□□□□ -0.02
NUP98-204ENST00000397004 TEKT1Q969V4 418 aa14.94□□□□□ -0.02
NUP98-204ENST00000397004 MIF4GDA9UHW6 222 aaKnown RBP14.94□□□□□ -0.02
NUP98-204ENST00000397004 ANP32DO95626 131 aa14.94□□□□□ -0.02
NUP98-204ENST00000397004 GH2P01242 217 aa14.94□□□□□ -0.02
NUP98-204ENST00000397004 NQO1P15559 274 aaKnown RBP14.94□□□□□ -0.02
NUP98-204ENST00000397004 NF2P35240 595 aa14.94□□□□□ -0.02
NUP98-204ENST00000397004 LXNQ9BS40 222 aa14.94□□□□□ -0.02
NUP98-204ENST00000397004 LRRC19Q9H756 370 aa14.94□□□□□ -0.02
NUP98-204ENST00000397004 ARHGEF10LQ9HCE6 1279 aa14.94□□□□□ -0.02
NUP98-204ENST00000397004 GOLGA8IPA6NC78 632 aa14.94□□□□□ -0.02
NUP98-204ENST00000397004 GOLGA8JA6NMD2 632 aa14.94□□□□□ -0.02
NUP98-204ENST00000397004 FOSP01100 380 aaPredicted RBP14.94□□□□□ -0.02
NUP98-204ENST00000397004 ADSSP30520 456 aa14.94□□□□□ -0.02
NUP98-204ENST00000397004 FOXN2P32314 431 aa14.94□□□□□ -0.02
NUP98-204ENST00000397004 VAMP7P51809 220 aa14.94□□□□□ -0.02
NUP98-204ENST00000397004 IKQ13123 557 aaPredicted RBP14.94□□□□□ -0.02
NUP98-204ENST00000397004 TAX1BP1Q86VP1 789 aa14.94□□□□□ -0.02
NUP98-204ENST00000397004 SP8Q8IXZ3 490 aa14.94□□□□□ -0.02
NUP98-204ENST00000397004 ACER1Q8TDN7 264 aa14.94□□□□□ -0.02
NUP98-204ENST00000397004 ECT2Q9H8V3 914 aa14.94□□□□□ -0.02
NUP98-204ENST00000397004 VEZTQ9HBM0 779 aa14.94□□□□□ -0.02
NUP98-204ENST00000397004 SUGT1Q9Y2Z0 365 aa14.94□□□□□ -0.02
NUP98-204ENST00000397004 NEU2Q9Y3R4 380 aa14.94□□□□□ -0.02
NUP98-204ENST00000397004 RIPK1Q13546 671 aa14.93□□□□□ -0.02
NUP98-204ENST00000397004 HS2ST1Q7LGA3 356 aa14.93□□□□□ -0.02
NUP98-204ENST00000397004 C12orf50Q8NA57 414 aaPredicted RBP14.93□□□□□ -0.02
NUP98-204ENST00000397004 ZNF564Q8TBZ8 553 aaPredicted RBP14.93□□□□□ -0.02
NUP98-204ENST00000397004 ZDHHC15Q96MV8 337 aa14.93□□□□□ -0.02
NUP98-204ENST00000397004 ZNF646O15015 1829 aaPredicted RBP14.93□□□□□ -0.02
NUP98-204ENST00000397004 DDX39AO00148 427 aaKnown RBP14.93□□□□□ -0.02
NUP98-204ENST00000397004 CYP1A2P05177 515 aa14.93□□□□□ -0.02
NUP98-204ENST00000397004 PRELPP51888 382 aa14.93□□□□□ -0.02
NUP98-204ENST00000397004 KRT17Q04695 432 aa14.93□□□□□ -0.02
NUP98-204ENST00000397004 ZKSCAN8Q15776 578 aaPredicted RBP14.93□□□□□ -0.02
NUP98-204ENST00000397004 PPP2R5EQ16537 467 aa14.93□□□□□ -0.02
NUP98-204ENST00000397004 RNF207Q6ZRF8 634 aa14.93□□□□□ -0.02
NUP98-204ENST00000397004 ANKS4BQ8N8V4 417 aa14.93□□□□□ -0.02
NUP98-204ENST00000397004 ANKRD42Q8N9B4 389 aa14.93□□□□□ -0.02
NUP98-204ENST00000397004 GPRC5CQ9NQ84 441 aa14.93□□□□□ -0.02
NUP98-204ENST00000397004 TOPORSQ9NS56 1045 aaPredicted RBP14.93□□□□□ -0.02
NUP98-204ENST00000397004 USP15Q9Y4E8 981 aaPredicted RBP14.93□□□□□ -0.02
NUP98-204ENST00000397004 BMP3P12645 472 aa14.93□□□□□ -0.02
NUP98-204ENST00000397004 NUGGCQ68CJ6 796 aa14.93□□□□□ -0.02
NUP98-204ENST00000397004 UBL4BQ8N7F7 174 aa14.93□□□□□ -0.02
NUP98-204ENST00000397004 SPOCK2Q92563 424 aa14.93□□□□□ -0.02
NUP98-204ENST00000397004 SAMD15Q9P1V8 674 aa14.93□□□□□ -0.02
NUP98-204ENST00000397004 RASAL2Q9UJF2 1139 aa14.93□□□□□ -0.02
NUP98-204ENST00000397004 GJB6O95452 261 aa14.92□□□□□ -0.02
NUP98-204ENST00000397004 ITGB5P18084 799 aa14.92□□□□□ -0.02
NUP98-204ENST00000397004 ERICH1Q86X53 443 aa14.92□□□□□ -0.02
NUP98-204ENST00000397004 HELQQ8TDG4 1101 aa14.92□□□□□ -0.02
NUP98-204ENST00000397004 C7orf43Q8WVR3 580 aa14.92□□□□□ -0.02
NUP98-204ENST00000397004 ARHGEF3Q9NR81 526 aa14.92□□□□□ -0.02
NUP98-204ENST00000397004 EURLQ9NYK6 297 aa14.92□□□□□ -0.02
NUP98-204ENST00000397004 PKD2L1Q9P0L9 805 aa14.92□□□□□ -0.02
NUP98-204ENST00000397004 PI4KBQ9UBF8 816 aa14.92□□□□□ -0.02
NUP98-204ENST00000397004 CCDC189A1A4V9 331 aa14.92□□□□□ -0.02
NUP98-204ENST00000397004 FSCN2O14926 492 aa14.92□□□□□ -0.02
NUP98-204ENST00000397004 TBK1Q9UHD2 729 aa14.92□□□□□ -0.02
NUP98-204ENST00000397004 GRID1Q9ULK0 1009 aa14.92□□□□□ -0.02
NUP98-204ENST00000397004 CEP83Q9Y592 693 aa14.92□□□□□ -0.02
NUP98-204ENST00000397004 NUMBLQ9Y6R0 609 aa14.92□□□□□ -0.02
NUP98-204ENST00000397004 SLX4Q8IY92 1834 aa14.92□□□□□ -0.02
NUP98-204ENST00000397004 MAP2K1Q02750 393 aaPredicted RBP14.92□□□□□ -0.02
NUP98-204ENST00000397004 CBWD2Q8IUF1 395 aa14.92□□□□□ -0.02
NUP98-204ENST00000397004 CKAP2Q8WWK9 683 aa14.92□□□□□ -0.02
NUP98-204ENST00000397004 ZC3H12CQ9C0D7 883 aaKnown RBP14.92□□□□□ -0.02
NUP98-204ENST00000397004 WNT8AQ9H1J5 351 aa14.92□□□□□ -0.02
NUP98-204ENST00000397004 K7ENM7 598 aa14.91□□□□□ -0.02
NUP98-204ENST00000397004 GAS7O60861 476 aa14.91□□□□□ -0.02
NUP98-204ENST00000397004 CYP11B1P15538 503 aa14.91□□□□□ -0.02
NUP98-204ENST00000397004 GCAP28676 217 aa14.91□□□□□ -0.02
NUP98-204ENST00000397004 RNASELQ05823 741 aaKnown RBP14.91□□□□□ -0.02
NUP98-204ENST00000397004 RASA3Q14644 834 aa14.91□□□□□ -0.02
NUP98-204ENST00000397004 ABCB5Q2M3G0 1257 aa14.91□□□□□ -0.02
NUP98-204ENST00000397004 CCDC174Q6PII3 467 aa14.91□□□□□ -0.02
NUP98-204ENST00000397004 CYFIP1Q7L576 1253 aa14.91□□□□□ -0.02
NUP98-204ENST00000397004 ECHDC2Q86YB7 292 aa14.91□□□□□ -0.02
NUP98-204ENST00000397004 CCDC50Q8IVM0 306 aa14.91□□□□□ -0.02
NUP98-204ENST00000397004 SYCP3Q8IZU3 236 aa14.91□□□□□ -0.02
NUP98-204ENST00000397004 IL31RAQ8NI17 732 aa14.91□□□□□ -0.02
NUP98-204ENST00000397004 CFHP08603 1231 aa14.91□□□□□ -0.02
NUP98-204ENST00000397004 ITGA8P53708 1063 aa14.91□□□□□ -0.02
NUP98-204ENST00000397004 SLMAPQ14BN4 828 aa14.91□□□□□ -0.02
NUP98-204ENST00000397004 CRELD2Q6UXH1 353 aaPredicted RBP14.91□□□□□ -0.02
NUP98-204ENST00000397004 TRMT1LQ7Z2T5 733 aaKnown RBP14.91□□□□□ -0.02
NUP98-204ENST00000397004 GLIS1Q8NBF1 620 aa14.91□□□□□ -0.02
NUP98-204ENST00000397004 HSPBP1Q9NZL4 362 aa14.91□□□□□ -0.02
NUP98-204ENST00000397004 COL20A1Q9P218 1284 aa14.91□□□□□ -0.02
NUP98-204ENST00000397004 SEL1LQ9UBV2 794 aa14.91□□□□□ -0.02
NUP98-204ENST00000397004 PDE6CP51160 858 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms