RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 EXOC8Q8IYI6 725 aa16.12■□□□□ 0.17
CBX3-202ENST00000396386 ATP8B4Q8TF62 1192 aa16.12■□□□□ 0.17
CBX3-202ENST00000396386 SLC10A4Q96EP9 437 aa16.12■□□□□ 0.17
CBX3-202ENST00000396386 MSTO1Q9BUK6 570 aa16.12■□□□□ 0.17
CBX3-202ENST00000396386 TARS2Q9BW92 718 aaKnown RBP16.12■□□□□ 0.17
CBX3-202ENST00000396386 ISCUQ9H1K1 167 aa16.12■□□□□ 0.17
CBX3-202ENST00000396386 ACBD3Q9H3P7 528 aa16.12■□□□□ 0.17
CBX3-202ENST00000396386 OSGEPQ9NPF4 335 aa16.12■□□□□ 0.17
CBX3-202ENST00000396386 RBAKQ9NYW8 714 aaPredicted RBP16.12■□□□□ 0.17
CBX3-202ENST00000396386 AMFRQ9UKV5 643 aa16.12■□□□□ 0.17
CBX3-202ENST00000396386 ASB14A6NK59 587 aa16.11■□□□□ 0.17
CBX3-202ENST00000396386 CYP26A1O43174 497 aa16.11■□□□□ 0.17
CBX3-202ENST00000396386 BUB1BO60566 1050 aaPredicted RBP16.11■□□□□ 0.17
CBX3-202ENST00000396386 RTN2O75298 545 aa16.11■□□□□ 0.17
CBX3-202ENST00000396386 CHRNB2P17787 502 aa16.11■□□□□ 0.17
CBX3-202ENST00000396386 PIK3CAP42336 1068 aa16.11■□□□□ 0.17
CBX3-202ENST00000396386 TNNT3P45378 269 aaPredicted RBP16.11■□□□□ 0.17
CBX3-202ENST00000396386 EFNA5P52803 228 aa16.11■□□□□ 0.17
CBX3-202ENST00000396386 HADHBP55084 474 aaKnown RBP16.11■□□□□ 0.17
CBX3-202ENST00000396386 GCNT1Q02742 428 aa16.11■□□□□ 0.17
CBX3-202ENST00000396386 PRPF4BQ13523 1007 aaKnown RBP16.11■□□□□ 0.17
CBX3-202ENST00000396386 SMC1AQ14683 1233 aaKnown RBP16.11■□□□□ 0.17
CBX3-202ENST00000396386 HSDL1Q3SXM5 330 aa16.11■□□□□ 0.17
CBX3-202ENST00000396386 TRIM50Q86XT4 487 aa16.11■□□□□ 0.17
CBX3-202ENST00000396386 USP38Q8NB14 1042 aa16.11■□□□□ 0.17
CBX3-202ENST00000396386 SPATA33Q96N06 139 aa16.11■□□□□ 0.17
CBX3-202ENST00000396386 HAPLN2Q9GZV7 340 aa16.11■□□□□ 0.17
CBX3-202ENST00000396386 SUGCTQ9HAC7 445 aa16.11■□□□□ 0.17
CBX3-202ENST00000396386 ST7Q9NRC1 585 aa16.11■□□□□ 0.17
CBX3-202ENST00000396386 STIM2Q9P246 746 aa16.11■□□□□ 0.17
CBX3-202ENST00000396386 A0A0B4J269 797 aa16.1■□□□□ 0.17
CBX3-202ENST00000396386 UNCXA6NJT0 531 aa16.1■□□□□ 0.17
CBX3-202ENST00000396386 ZMYND10O75800 440 aa16.1■□□□□ 0.17
CBX3-202ENST00000396386 FTLP02792 175 aaPredicted RBP16.1■□□□□ 0.17
CBX3-202ENST00000396386 TNNI1P19237 187 aa16.1■□□□□ 0.17
CBX3-202ENST00000396386 OAS2P29728 719 aaKnown RBP16.1■□□□□ 0.17
CBX3-202ENST00000396386 ACOT2P49753 483 aa16.1■□□□□ 0.17
CBX3-202ENST00000396386 TNNC1P63316 161 aa16.1■□□□□ 0.17
CBX3-202ENST00000396386 CCNA1P78396 465 aa16.1■□□□□ 0.17
CBX3-202ENST00000396386 TTLL4Q14679 1199 aa16.1■□□□□ 0.17
CBX3-202ENST00000396386 TCEAL1Q15170 157 aa16.1■□□□□ 0.17
CBX3-202ENST00000396386 PTPROQ16827 1216 aa16.1■□□□□ 0.17
CBX3-202ENST00000396386 ZACNQ401N2 412 aa16.1■□□□□ 0.17
CBX3-202ENST00000396386 TAF3Q5VWG9 929 aa16.1■□□□□ 0.17
CBX3-202ENST00000396386 CCDC62Q6P9F0 684 aa16.1■□□□□ 0.17
CBX3-202ENST00000396386 ZPBP2Q6X784 338 aa16.1■□□□□ 0.17
CBX3-202ENST00000396386 CCNI2Q6ZMN8 369 aaPredicted RBP16.1■□□□□ 0.17
CBX3-202ENST00000396386 SLC47A2Q86VL8 602 aa16.1■□□□□ 0.17
CBX3-202ENST00000396386 ACTRT1Q8TDG2 376 aa16.1■□□□□ 0.17
CBX3-202ENST00000396386 HES6Q96HZ4 224 aa16.1■□□□□ 0.17
CBX3-202ENST00000396386 CGRRF1Q99675 332 aa16.1■□□□□ 0.17
CBX3-202ENST00000396386 JPH2Q9BR39 696 aaPredicted RBP16.1■□□□□ 0.17
CBX3-202ENST00000396386 ADGRA2Q96PE1 1338 aa16.1■□□□□ 0.17
CBX3-202ENST00000396386 A0A0U1RQG5 324 aaPredicted RBP16.1■□□□□ 0.17
CBX3-202ENST00000396386 PGRMC1O00264 195 aaKnown RBP16.1■□□□□ 0.17
CBX3-202ENST00000396386 CEP104O60308 925 aa16.1■□□□□ 0.17
CBX3-202ENST00000396386 EDN1P05305 212 aa16.1■□□□□ 0.17
CBX3-202ENST00000396386 ZBTB48P10074 688 aaPredicted RBP16.1■□□□□ 0.17
CBX3-202ENST00000396386 CYP2C8P10632 490 aa16.1■□□□□ 0.17
CBX3-202ENST00000396386 GZMAP12544 262 aa16.1■□□□□ 0.17
CBX3-202ENST00000396386 CYP11B1P15538 503 aa16.1■□□□□ 0.17
CBX3-202ENST00000396386 TNFRSF8P28908 595 aa16.1■□□□□ 0.17
CBX3-202ENST00000396386 SLC26A2P50443 739 aa16.1■□□□□ 0.17
CBX3-202ENST00000396386 CDR2Q01850 454 aa16.1■□□□□ 0.17
CBX3-202ENST00000396386 DRP2Q13474 957 aa16.1■□□□□ 0.17
CBX3-202ENST00000396386 PLCB4Q15147 1175 aa16.1■□□□□ 0.17
CBX3-202ENST00000396386 WDR44Q5JSH3 913 aa16.1■□□□□ 0.17
CBX3-202ENST00000396386 CDCA2Q69YH5 1023 aaPredicted RBP16.1■□□□□ 0.17
CBX3-202ENST00000396386 CRELD2Q6UXH1 353 aaPredicted RBP16.1■□□□□ 0.17
CBX3-202ENST00000396386 ZBTB8OSQ8IWT0 167 aa16.1■□□□□ 0.17
CBX3-202ENST00000396386 METTL13Q8N6R0 699 aa16.1■□□□□ 0.17
CBX3-202ENST00000396386 PRPF31Q8WWY3 499 aaKnown RBP16.1■□□□□ 0.17
CBX3-202ENST00000396386 ZNF516Q92618 1163 aa16.1■□□□□ 0.17
CBX3-202ENST00000396386 ZBTB45Q96K62 511 aaPredicted RBP16.1■□□□□ 0.17
CBX3-202ENST00000396386 GRIN3BO60391 1043 aa16.09■□□□□ 0.17
CBX3-202ENST00000396386 HLA-DRAP01903 254 aa16.09■□□□□ 0.17
CBX3-202ENST00000396386 C4BPAP04003 597 aaKnown RBP16.09■□□□□ 0.17
CBX3-202ENST00000396386 TXNP10599 105 aaKnown RBP16.09■□□□□ 0.17
CBX3-202ENST00000396386 GPC5P78333 572 aa16.09■□□□□ 0.17
CBX3-202ENST00000396386 FMO1Q01740 532 aa16.09■□□□□ 0.17
CBX3-202ENST00000396386 BIRC3Q13489 604 aa16.09■□□□□ 0.17
CBX3-202ENST00000396386 MXD4Q14582 209 aaPredicted RBP16.09■□□□□ 0.17
CBX3-202ENST00000396386 TDRD10Q5VZ19 366 aaKnown RBP16.09■□□□□ 0.17
CBX3-202ENST00000396386 LMBRD2Q68DH5 695 aaPredicted RBP16.09■□□□□ 0.17
CBX3-202ENST00000396386 C11orf63Q6NUN7 778 aa16.09■□□□□ 0.17
CBX3-202ENST00000396386 GSPT2Q8IYD1 628 aaKnown RBP16.09■□□□□ 0.17
CBX3-202ENST00000396386 GPRC5AQ8NFJ5 357 aa16.09■□□□□ 0.17
CBX3-202ENST00000396386 SCFD2Q8WU76 684 aa16.09■□□□□ 0.17
CBX3-202ENST00000396386 HDAC7Q8WUI4 952 aa16.09■□□□□ 0.17
CBX3-202ENST00000396386 DHX38Q92620 1227 aaKnown RBP16.09■□□□□ 0.17
CBX3-202ENST00000396386 TATDN2Q93075 761 aa16.09■□□□□ 0.17
CBX3-202ENST00000396386 PCDHB18PQ96TA0 734 aa16.09■□□□□ 0.17
CBX3-202ENST00000396386 PI4K2AQ9BTU6 479 aa16.09■□□□□ 0.17
CBX3-202ENST00000396386 MRPL4Q9BYD3 311 aaKnown RBP16.09■□□□□ 0.17
CBX3-202ENST00000396386 CCDC113Q9H0I3 377 aa16.09■□□□□ 0.17
CBX3-202ENST00000396386 SMARCAD1Q9H4L7 1026 aa16.09■□□□□ 0.17
CBX3-202ENST00000396386 VIPAS39Q9H9C1 493 aa16.09■□□□□ 0.17
CBX3-202ENST00000396386 ZNF408Q9H9D4 720 aa16.09■□□□□ 0.17
CBX3-202ENST00000396386 EFCC1Q9HA90 598 aa16.09■□□□□ 0.17
CBX3-202ENST00000396386 PDE11AQ9HCR9 933 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms