RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 RBM17Q96I25 401 aaKnown RBP9.3□□□□□ -0.92
BDNF-204ENST00000395980 GMCL1Q96IK5 515 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 TMEM237Q96Q45 408 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 PCDHB18PQ96TA0 734 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 NUP85Q9BW27 656 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 TRAIPQ9BWF2 469 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 KCNK9Q9NPC2 374 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 PTPN22Q9Y2R2 807 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 EMSYQ7Z589 1322 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 ABLIM1O14639 778 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 ABHD2P08910 425 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 EEF2P13639 858 aaKnown RBP9.3□□□□□ -0.92
BDNF-204ENST00000395980 PRELPP51888 382 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 SLC18A1P54219 525 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 ANKRD20A2Q5SQ80 823 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 ODR4Q5SWX8 454 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 ANKRD20A1Q5TYW2 823 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 ANKRD20A3Q5VUR7 823 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 RGS9BPQ6ZS82 235 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 ERICH1Q86X53 443 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 APLFQ8IW19 511 aaPredicted RBP9.3□□□□□ -0.92
BDNF-204ENST00000395980 ARHGEF19Q8IW93 802 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 GMCL1P1Q8NEA9 526 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 PIGOQ8TEQ8 1089 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 SH3TC2Q8TF17 1288 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 DYDC2Q96IM9 177 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 CCDC77Q9BR77 488 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 IKZF4Q9H2S9 585 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 TMEM206Q9H813 350 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 UBN1Q9NPG3 1134 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 CTNNAL1Q9UBT7 734 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 ASIC3Q9UHC3 531 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 KCNJ1P48048 391 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 VAMP7P51809 220 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 KCNQ4P56696 695 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 SNRPFP62306 86 aaKnown RBP9.29□□□□□ -0.92
BDNF-204ENST00000395980 SYDE2Q5VT97 1194 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 CGB2Q6NT52 195 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 HHIPL2Q6UWX4 724 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 OTUD6AQ7L8S5 288 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 ANKRD35Q8N283 1001 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 ANKRD42Q8N9B4 389 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 ARMC2Q8NEN0 867 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 INPP5DQ92835 1189 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 FAM212AQ96EL1 285 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 RMDN2Q96LZ7 410 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 COA1Q9GZY4 146 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 EURLQ9NYK6 297 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 PNMA3Q9UL41 463 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 STARD13Q9Y3M8 1113 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 MYH11P35749 1972 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 THAP12O43422 761 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 CREB1P16220 341 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 IL9RQ01113 521 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 CENPCQ03188 943 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 SF3A3Q12874 501 aaKnown RBP eCLIP9.29□□□□□ -0.92
BDNF-204ENST00000395980 CAPRIN2Q6IMN6 1127 aaKnown RBP9.29□□□□□ -0.92
BDNF-204ENST00000395980 TPH2Q8IWU9 490 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 SYCP3Q8IZU3 236 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 KIF2BQ8N4N8 673 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 PRCCQ92733 491 aaPredicted RBP9.29□□□□□ -0.92
BDNF-204ENST00000395980 NINJ2Q9NZG7 142 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 TAF1LQ8IZX4 1826 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 ATF2P15336 505 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 TAC1P20366 129 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 YARSP54577 528 aaKnown RBP9.29□□□□□ -0.92
BDNF-204ENST00000395980 GTF2IP78347 998 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 MPP2Q14168 576 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 SETDB1Q15047 1291 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 MIS18BP1Q6P0N0 1132 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 NOP9Q86U38 636 aaKnown RBP9.29□□□□□ -0.92
BDNF-204ENST00000395980 ECHDC2Q86YB7 292 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 LARGE2Q8N3Y3 721 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 SHC3Q92529 594 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 ZNF653Q96CK0 615 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 WDR11Q9BZH6 1224 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 POLLQ9UGP5 575 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 SIPA1L1O43166 1804 aa9.29□□□□□ -0.92
BDNF-204ENST00000395980 HIP1RO75146 1068 aa9.28□□□□□ -0.92
BDNF-204ENST00000395980 CHKAP35790 457 aa9.28□□□□□ -0.92
BDNF-204ENST00000395980 POLGP54098 1239 aaPredicted RBP9.28□□□□□ -0.92
BDNF-204ENST00000395980 FMO1Q01740 532 aa9.28□□□□□ -0.92
BDNF-204ENST00000395980 MGAT5Q09328 741 aa9.28□□□□□ -0.92
BDNF-204ENST00000395980 RASA3Q14644 834 aa9.28□□□□□ -0.92
BDNF-204ENST00000395980 PRR5LQ6MZQ0 368 aa9.28□□□□□ -0.92
BDNF-204ENST00000395980 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.28□□□□□ -0.92
BDNF-204ENST00000395980 SPICE1Q8N0Z3 855 aa9.28□□□□□ -0.92
BDNF-204ENST00000395980 ANKLE1Q8NAG6 615 aa9.28□□□□□ -0.92
BDNF-204ENST00000395980 SPDL1Q96EA4 605 aa9.28□□□□□ -0.92
BDNF-204ENST00000395980 GGT7Q9UJ14 662 aa9.28□□□□□ -0.92
BDNF-204ENST00000395980 STK38LQ9Y2H1 464 aa9.28□□□□□ -0.92
BDNF-204ENST00000395980 BTAF1O14981 1849 aa9.28□□□□□ -0.92
BDNF-204ENST00000395980 CLDN3O15551 220 aa9.28□□□□□ -0.92
BDNF-204ENST00000395980 HOXA10P31260 410 aaPredicted RBP9.28□□□□□ -0.92
BDNF-204ENST00000395980 ITGA8P53708 1063 aa9.28□□□□□ -0.92
BDNF-204ENST00000395980 PPP3CAQ08209 521 aa9.28□□□□□ -0.92
BDNF-204ENST00000395980 CDC42EP5Q6NZY7 148 aa9.28□□□□□ -0.92
BDNF-204ENST00000395980 RNPEPL1Q9HAU8 725 aa9.28□□□□□ -0.92
BDNF-204ENST00000395980 LRRC42Q9Y546 428 aa9.28□□□□□ -0.92
BDNF-204ENST00000395980 USH1CQ9Y6N9 552 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms