RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 CDR2Q01850 454 aa10.31□□□□□ -0.76
CDRT1-204ENST00000395906 EN1Q05925 392 aaPredicted RBP10.31□□□□□ -0.76
CDRT1-204ENST00000395906 HNRNPDQ14103 355 aaKnown RBP10.31□□□□□ -0.76
CDRT1-204ENST00000395906 E2F2Q14209 437 aa10.31□□□□□ -0.76
CDRT1-204ENST00000395906 LDHAL6AQ6ZMR3 332 aa10.31□□□□□ -0.76
CDRT1-204ENST00000395906 DDHD1Q8NEL9 900 aa10.31□□□□□ -0.76
CDRT1-204ENST00000395906 MGARPQ8TDB4 240 aa10.31□□□□□ -0.76
CDRT1-204ENST00000395906 DTX3LQ8TDB6 740 aa10.31□□□□□ -0.76
CDRT1-204ENST00000395906 PRPF31Q8WWY3 499 aaKnown RBP10.31□□□□□ -0.76
CDRT1-204ENST00000395906 TGS1Q96RS0 853 aaKnown RBP10.31□□□□□ -0.76
CDRT1-204ENST00000395906 FNBP1Q96RU3 617 aa10.31□□□□□ -0.76
CDRT1-204ENST00000395906 DSCC1Q9BVC3 393 aa10.31□□□□□ -0.76
CDRT1-204ENST00000395906 CCDC113Q9H0I3 377 aa10.31□□□□□ -0.76
CDRT1-204ENST00000395906 SLITRK6Q9H5Y7 841 aa10.31□□□□□ -0.76
CDRT1-204ENST00000395906 TFCP2L1Q9NZI6 479 aa10.31□□□□□ -0.76
CDRT1-204ENST00000395906 ARHGAP20Q9P2F6 1191 aa10.31□□□□□ -0.76
CDRT1-204ENST00000395906 CNOT7Q9UIV1 285 aaKnown RBP10.31□□□□□ -0.76
CDRT1-204ENST00000395906 DBNLQ9UJU6 430 aaKnown RBP10.31□□□□□ -0.76
CDRT1-204ENST00000395906 DMTF1Q9Y222 760 aa10.31□□□□□ -0.76
CDRT1-204ENST00000395906 CHKBQ9Y259 395 aa10.31□□□□□ -0.76
CDRT1-204ENST00000395906 COQ6Q9Y2Z9 468 aa10.31□□□□□ -0.76
CDRT1-204ENST00000395906 CASZ1Q86V15 1759 aa10.31□□□□□ -0.76
CDRT1-204ENST00000395906 CCDC188H7C350 402 aa10.31□□□□□ -0.76
CDRT1-204ENST00000395906 ZNF862O60290 1169 aa10.31□□□□□ -0.76
CDRT1-204ENST00000395906 RANBP6O60518 1105 aaKnown RBP10.31□□□□□ -0.76
CDRT1-204ENST00000395906 FBXO21O94952 628 aa10.31□□□□□ -0.76
CDRT1-204ENST00000395906 APOEP02649 317 aa10.31□□□□□ -0.76
CDRT1-204ENST00000395906 CASP1P29466 404 aa10.31□□□□□ -0.76
CDRT1-204ENST00000395906 CTSWP56202 376 aa10.31□□□□□ -0.76
CDRT1-204ENST00000395906 ZNF449Q6P9G9 518 aa10.31□□□□□ -0.76
CDRT1-204ENST00000395906 CAPN12Q6ZSI9 719 aa10.31□□□□□ -0.76
CDRT1-204ENST00000395906 ANKRD13CQ8N6S4 541 aa10.31□□□□□ -0.76
CDRT1-204ENST00000395906 PYROXD1Q8WU10 500 aa10.31□□□□□ -0.76
CDRT1-204ENST00000395906 HPS3Q969F9 1004 aa10.31□□□□□ -0.76
CDRT1-204ENST00000395906 AIFM3Q96NN9 605 aa10.31□□□□□ -0.76
CDRT1-204ENST00000395906 MAGEC2Q9UBF1 373 aaPredicted RBP10.31□□□□□ -0.76
CDRT1-204ENST00000395906 PLAGL2Q9UPG8 496 aa10.31□□□□□ -0.76
CDRT1-204ENST00000395906 UTP11Q9Y3A2 253 aaKnown RBP10.31□□□□□ -0.76
CDRT1-204ENST00000395906 A0A088AWK7 358 aa10.3□□□□□ -0.76
CDRT1-204ENST00000395906 CCDC160A6NGH7 325 aa10.3□□□□□ -0.76
CDRT1-204ENST00000395906 DKC1O60832 514 aaKnown RBP eCLIP10.3□□□□□ -0.76
CDRT1-204ENST00000395906 TBCAO75347 108 aaKnown RBP10.3□□□□□ -0.76
CDRT1-204ENST00000395906 NTSR2O95665 410 aa10.3□□□□□ -0.76
CDRT1-204ENST00000395906 FTCDO95954 541 aa10.3□□□□□ -0.76
CDRT1-204ENST00000395906 PHBP35232 272 aa10.3□□□□□ -0.76
CDRT1-204ENST00000395906 BCAP31P51572 246 aa10.3□□□□□ -0.76
CDRT1-204ENST00000395906 CYTH1Q15438 398 aa10.3□□□□□ -0.76
CDRT1-204ENST00000395906 TGFBIQ15582 683 aa10.3□□□□□ -0.76
CDRT1-204ENST00000395906 CYB5R4Q7L1T6 521 aa10.3□□□□□ -0.76
CDRT1-204ENST00000395906 DEFB132Q7Z7B7 95 aa10.3□□□□□ -0.76
CDRT1-204ENST00000395906 ACTRT1Q8TDG2 376 aa10.3□□□□□ -0.76
CDRT1-204ENST00000395906 UIMC1Q96RL1 719 aa10.3□□□□□ -0.76
CDRT1-204ENST00000395906 NLRC4Q9NPP4 1024 aa10.3□□□□□ -0.76
CDRT1-204ENST00000395906 SNX9Q9Y5X1 595 aa10.3□□□□□ -0.76
CDRT1-204ENST00000395906 CNTNAP4Q9C0A0 1308 aa10.3□□□□□ -0.76
CDRT1-204ENST00000395906 TAF1P21675 1872 aa10.3□□□□□ -0.76
CDRT1-204ENST00000395906 TEX28O15482 410 aa10.3□□□□□ -0.76
CDRT1-204ENST00000395906 TRMUO75648 421 aaKnown RBP10.3□□□□□ -0.76
CDRT1-204ENST00000395906 TUFMP49411 452 aaKnown RBP10.3□□□□□ -0.76
CDRT1-204ENST00000395906 EIF2B5Q13144 721 aaKnown RBP10.3□□□□□ -0.76
CDRT1-204ENST00000395906 SEPT6Q14141 434 aa10.3□□□□□ -0.76
CDRT1-204ENST00000395906 WDR78Q5VTH9 848 aa10.3□□□□□ -0.76
CDRT1-204ENST00000395906 PDXDC1Q6P996 788 aa10.3□□□□□ -0.76
CDRT1-204ENST00000395906 NLRP9Q7RTR0 991 aa10.3□□□□□ -0.76
CDRT1-204ENST00000395906 VPS36Q86VN1 386 aa10.3□□□□□ -0.76
CDRT1-204ENST00000395906 ESX1Q8N693 406 aa10.3□□□□□ -0.76
CDRT1-204ENST00000395906 RIN3Q8TB24 985 aa10.3□□□□□ -0.76
CDRT1-204ENST00000395906 EFHD2Q96C19 240 aaPredicted RBP10.3□□□□□ -0.76
CDRT1-204ENST00000395906 PCMTD1Q96MG8 357 aaPredicted RBP10.3□□□□□ -0.76
CDRT1-204ENST00000395906 NEURL2Q9BR09 285 aa10.3□□□□□ -0.76
CDRT1-204ENST00000395906 CEP44Q9C0F1 390 aa10.3□□□□□ -0.76
CDRT1-204ENST00000395906 CSRNP2Q9H175 543 aa10.3□□□□□ -0.76
CDRT1-204ENST00000395906 CNNM1Q9NRU3 951 aa10.3□□□□□ -0.76
CDRT1-204ENST00000395906 EMILIN3Q9NT22 766 aa10.3□□□□□ -0.76
CDRT1-204ENST00000395906 USP40Q9NVE5 1235 aa10.3□□□□□ -0.76
CDRT1-204ENST00000395906 NARFQ9UHQ1 456 aa10.3□□□□□ -0.76
CDRT1-204ENST00000395906 C4AP0C0L4 1744 aa10.29□□□□□ -0.76
CDRT1-204ENST00000395906 C4BP0C0L5 1744 aa10.29□□□□□ -0.76
CDRT1-204ENST00000395906 TMEM120BA0PK00 339 aa10.29□□□□□ -0.76
CDRT1-204ENST00000395906 A8MXQ7 604 aa10.29□□□□□ -0.76
CDRT1-204ENST00000395906 AP1G1O43747 822 aa10.29□□□□□ -0.76
CDRT1-204ENST00000395906 STAM2O75886 525 aa10.29□□□□□ -0.76
CDRT1-204ENST00000395906 ADORA1P30542 326 aa10.29□□□□□ -0.76
CDRT1-204ENST00000395906 EIF2B2P49770 351 aaKnown RBP10.29□□□□□ -0.76
CDRT1-204ENST00000395906 EHHADHQ08426 723 aa10.29□□□□□ -0.76
CDRT1-204ENST00000395906 MED21Q13503 144 aa10.29□□□□□ -0.76
CDRT1-204ENST00000395906 NR1D2Q14995 579 aa10.29□□□□□ -0.76
CDRT1-204ENST00000395906 MYLK3Q32MK0 819 aa10.29□□□□□ -0.76
CDRT1-204ENST00000395906 TNNI3KQ59H18 835 aa10.29□□□□□ -0.76
CDRT1-204ENST00000395906 MFSD5Q6N075 450 aa10.29□□□□□ -0.76
CDRT1-204ENST00000395906 USP49Q70CQ1 688 aa10.29□□□□□ -0.76
CDRT1-204ENST00000395906 C2CD5Q86YS7 1000 aa10.29□□□□□ -0.76
CDRT1-204ENST00000395906 CCDC125Q86Z20 511 aa10.29□□□□□ -0.76
CDRT1-204ENST00000395906 NOSTRINQ8IVI9 506 aa10.29□□□□□ -0.76
CDRT1-204ENST00000395906 SPERTQ8NA61 448 aa10.29□□□□□ -0.76
CDRT1-204ENST00000395906 MAGEB18Q96M61 343 aa10.29□□□□□ -0.76
CDRT1-204ENST00000395906 CADM1Q9BY67 442 aaKnown RBP10.29□□□□□ -0.76
CDRT1-204ENST00000395906 PDGFDQ9GZP0 370 aaPredicted RBP10.29□□□□□ -0.76
CDRT1-204ENST00000395906 RBM38Q9H0Z9 239 aaKnown RBP10.29□□□□□ -0.76
CDRT1-204ENST00000395906 SAR1AQ9NR31 198 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms