RNA–Protein interactions for RNA: ENST00000395841.6

RAE1-203, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-203ENST00000395841 CYP1A2P05177 515 aa12.13□□□□□ -0.47
RAE1-203ENST00000395841 SUPT20HL2P0C7V6 817 aa12.13□□□□□ -0.47
RAE1-203ENST00000395841 HSD17B3P37058 310 aa12.13□□□□□ -0.47
RAE1-203ENST00000395841 IRAK1P51617 712 aa12.13□□□□□ -0.47
RAE1-203ENST00000395841 SP4Q02446 784 aa12.13□□□□□ -0.47
RAE1-203ENST00000395841 ZNF211Q13398 564 aaPredicted RBP12.13□□□□□ -0.47
RAE1-203ENST00000395841 TUBB8Q3ZCM7 444 aa12.13□□□□□ -0.47
RAE1-203ENST00000395841 SUPT20HL1Q3ZLR7 823 aa12.13□□□□□ -0.47
RAE1-203ENST00000395841 ENOSF1Q7L5Y1 443 aa12.13□□□□□ -0.47
RAE1-203ENST00000395841 BICD1Q96G01 975 aa12.13□□□□□ -0.47
RAE1-203ENST00000395841 CELF4Q9BZC1 486 aaKnown RBP12.13□□□□□ -0.47
RAE1-203ENST00000395841 RAB17Q9H0T7 212 aa12.13□□□□□ -0.47
RAE1-203ENST00000395841 NEUROG2Q9H2A3 272 aa12.13□□□□□ -0.47
RAE1-203ENST00000395841 SBF1O95248 1867 aa12.13□□□□□ -0.47
RAE1-203ENST00000395841 RLFQ13129 1914 aa12.13□□□□□ -0.47
RAE1-203ENST00000395841 ZC3H11AO75152 810 aaKnown RBP eCLIP12.12□□□□□ -0.475e-6■■□□□ 11.9
RAE1-203ENST00000395841 PPFIA4O75335 1185 aa12.12□□□□□ -0.47
RAE1-203ENST00000395841 USP2O75604 605 aaPredicted RBP12.12□□□□□ -0.47
RAE1-203ENST00000395841 POTEJP0CG39 1038 aa12.12□□□□□ -0.47
RAE1-203ENST00000395841 HSPA6P17066 643 aa12.12□□□□□ -0.47
RAE1-203ENST00000395841 DR1Q01658 176 aa12.12□□□□□ -0.47
RAE1-203ENST00000395841 EAPPQ56P03 285 aaPredicted RBP12.12□□□□□ -0.47
RAE1-203ENST00000395841 NOL9Q5SY16 702 aaKnown RBP12.12□□□□□ -0.47
RAE1-203ENST00000395841 NAA35Q5VZE5 725 aa12.12□□□□□ -0.47
RAE1-203ENST00000395841 TAS1R3Q7RTX0 852 aa12.12□□□□□ -0.47
RAE1-203ENST00000395841 FAM81BQ96LP2 452 aa12.12□□□□□ -0.47
RAE1-203ENST00000395841 FAM213AQ9BRX8 229 aa12.12□□□□□ -0.47
RAE1-203ENST00000395841 WNT8AQ9H1J5 351 aa12.12□□□□□ -0.47
RAE1-203ENST00000395841 KIAA1586Q9HCI6 787 aa12.12□□□□□ -0.47
RAE1-203ENST00000395841 ACP6Q9NPH0 428 aa12.12□□□□□ -0.47
RAE1-203ENST00000395841 FAM187AA6NFU0 413 aa12.12□□□□□ -0.47
RAE1-203ENST00000395841 SPDYE16A6NNV3 312 aaPredicted RBP12.12□□□□□ -0.47
RAE1-203ENST00000395841 DLATP10515 647 aaKnown RBP12.12□□□□□ -0.47
RAE1-203ENST00000395841 COMTP21964 271 aa12.12□□□□□ -0.47
RAE1-203ENST00000395841 SCP2P22307 547 aa12.12□□□□□ -0.47
RAE1-203ENST00000395841 GCNT1Q02742 428 aa12.12□□□□□ -0.47
RAE1-203ENST00000395841 MTMR3Q13615 1198 aa12.12□□□□□ -0.47
RAE1-203ENST00000395841 DHX34Q14147 1143 aaKnown RBP12.12□□□□□ -0.47
RAE1-203ENST00000395841 MESDQ14696 234 aa12.12□□□□□ -0.47
RAE1-203ENST00000395841 EMC10Q5UCC4 262 aa12.12□□□□□ -0.47
RAE1-203ENST00000395841 DDX1Q92499 740 aaKnown RBP12.12□□□□□ -0.47
RAE1-203ENST00000395841 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.12□□□□□ -0.47
RAE1-203ENST00000395841 GTF3C4Q9UKN8 822 aa12.12□□□□□ -0.47
RAE1-203ENST00000395841 AFG3L2Q9Y4W6 797 aa12.12□□□□□ -0.47
RAE1-203ENST00000395841 PPP2R3BQ9Y5P8 575 aa12.12□□□□□ -0.47
RAE1-203ENST00000395841 TMEM110-MUSTN1A8MSY1 372 aa12.11□□□□□ -0.47
RAE1-203ENST00000395841 HMGB1P1B2RPK0 211 aaPredicted RBP12.11□□□□□ -0.47
RAE1-203ENST00000395841 EXTL3O43909 919 aa12.11□□□□□ -0.47
RAE1-203ENST00000395841 PEX5P50542 639 aa12.11□□□□□ -0.47
RAE1-203ENST00000395841 VGLL4Q14135 290 aa12.11□□□□□ -0.47
RAE1-203ENST00000395841 STXBP2Q15833 593 aa12.11□□□□□ -0.47
RAE1-203ENST00000395841 UAP1Q16222 522 aaPredicted RBP12.11□□□□□ -0.47
RAE1-203ENST00000395841 MTERF2Q49AM1 385 aa12.11□□□□□ -0.47
RAE1-203ENST00000395841 KCTD16Q68DU8 428 aa12.11□□□□□ -0.47
RAE1-203ENST00000395841 FOXR1Q6PIV2 292 aa12.11□□□□□ -0.47
RAE1-203ENST00000395841 SH2D3CQ8N5H7 860 aa12.11□□□□□ -0.47
RAE1-203ENST00000395841 ZNF564Q8TBZ8 553 aaPredicted RBP12.11□□□□□ -0.47
RAE1-203ENST00000395841 KRT35Q92764 455 aa12.11□□□□□ -0.47
RAE1-203ENST00000395841 KCNN1Q92952 543 aa12.11□□□□□ -0.47
RAE1-203ENST00000395841 ATP6V1G3Q96LB4 118 aa12.11□□□□□ -0.47
RAE1-203ENST00000395841 NUP85Q9BW27 656 aa12.11□□□□□ -0.47
RAE1-203ENST00000395841 R3HDMLQ9H3Y0 253 aa12.11□□□□□ -0.47
RAE1-203ENST00000395841 UVRAGQ9P2Y5 699 aa12.11□□□□□ -0.47
RAE1-203ENST00000395841 TRPC6Q9Y210 931 aa12.11□□□□□ -0.47
RAE1-203ENST00000395841 GOLGA6L10A6NI86 522 aa12.11□□□□□ -0.47
RAE1-203ENST00000395841 H0YGN5 161 aa12.11□□□□□ -0.47
RAE1-203ENST00000395841 ATMINO43313 823 aaPredicted RBP12.11□□□□□ -0.47
RAE1-203ENST00000395841 GGPS1O95749 300 aa12.11□□□□□ -0.47
RAE1-203ENST00000395841 ICAM3P32942 547 aa12.11□□□□□ -0.47
RAE1-203ENST00000395841 LIG4P49917 911 aa12.11□□□□□ -0.47
RAE1-203ENST00000395841 POLGP54098 1239 aaPredicted RBP12.11□□□□□ -0.47
RAE1-203ENST00000395841 GNGT1P63211 74 aa12.11□□□□□ -0.47
RAE1-203ENST00000395841 CLDN10P78369 228 aa12.11□□□□□ -0.47
RAE1-203ENST00000395841 EMC2Q15006 297 aa12.11□□□□□ -0.47
RAE1-203ENST00000395841 GPR162Q16538 588 aa12.11□□□□□ -0.47
RAE1-203ENST00000395841 CEP85LQ5SZL2 805 aa12.11□□□□□ -0.47
RAE1-203ENST00000395841 KDM7AQ6ZMT4 941 aa12.11□□□□□ -0.47
RAE1-203ENST00000395841 C15orf39Q6ZRI6 1047 aa12.11□□□□□ -0.47
RAE1-203ENST00000395841 ADAT2Q7Z6V5 191 aaKnown RBP12.11□□□□□ -0.47
RAE1-203ENST00000395841 DNERQ8NFT8 737 aa12.11□□□□□ -0.47
RAE1-203ENST00000395841 CD101Q93033 1021 aa12.11□□□□□ -0.47
RAE1-203ENST00000395841 TATDN2Q93075 761 aa12.11□□□□□ -0.47
RAE1-203ENST00000395841 ZNF653Q96CK0 615 aa12.11□□□□□ -0.47
RAE1-203ENST00000395841 TRIM51Q9BSJ1 452 aa12.11□□□□□ -0.47
RAE1-203ENST00000395841 ERVK-5Q9HDB9 667 aa12.11□□□□□ -0.47
RAE1-203ENST00000395841 MAFBQ9Y5Q3 323 aaPredicted RBP12.11□□□□□ -0.47
RAE1-203ENST00000395841 NFS1Q9Y697 457 aa12.11□□□□□ -0.47
RAE1-203ENST00000395841 GRIN2DO15399 1336 aa12.11□□□□□ -0.47
RAE1-203ENST00000395841 COL11A1P12107 1806 aaPredicted RBP12.1□□□□□ -0.47
RAE1-203ENST00000395841 KIAA0391O15091 583 aaKnown RBP12.1□□□□□ -0.47
RAE1-203ENST00000395841 EIF3HO15372 352 aaKnown RBP eCLIP12.1□□□□□ -0.47
RAE1-203ENST00000395841 ATG7O95352 703 aa12.1□□□□□ -0.47
RAE1-203ENST00000395841 MARCKSL1P49006 195 aa12.1□□□□□ -0.47
RAE1-203ENST00000395841 SP2Q02086 613 aa12.1□□□□□ -0.47
RAE1-203ENST00000395841 STRN3Q13033 797 aa12.1□□□□□ -0.47
RAE1-203ENST00000395841 PSMD6Q15008 389 aa12.1□□□□□ -0.47
RAE1-203ENST00000395841 DNAJC21Q5F1R6 531 aaKnown RBP12.1□□□□□ -0.47
RAE1-203ENST00000395841 SH3D19Q5HYK7 790 aa12.1□□□□□ -0.47
RAE1-203ENST00000395841 TREML2Q5T2D2 321 aa12.1□□□□□ -0.47
RAE1-203ENST00000395841 DUPD1Q68J44 220 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms