RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 BNIP3LO60238 219 aa12.54□□□□□ -0.4
RTN1-203ENST00000395090 HBP1O60381 514 aa12.54□□□□□ -0.4
RTN1-203ENST00000395090 FKTNO75072 461 aa12.54□□□□□ -0.4
RTN1-203ENST00000395090 HOXD13P35453 343 aa12.54□□□□□ -0.4
RTN1-203ENST00000395090 CASP5P51878 434 aa12.54□□□□□ -0.4
RTN1-203ENST00000395090 NKX3-2P78367 333 aa12.54□□□□□ -0.4
RTN1-203ENST00000395090 LRRC63Q05C16 580 aa12.54□□□□□ -0.4
RTN1-203ENST00000395090 DGKDQ16760 1214 aa12.54□□□□□ -0.4
RTN1-203ENST00000395090 MTERF2Q49AM1 385 aa12.54□□□□□ -0.4
RTN1-203ENST00000395090 ZCWPW2Q504Y3 356 aa12.54□□□□□ -0.4
RTN1-203ENST00000395090 FAM178BQ8IXR5 827 aa12.54□□□□□ -0.4
RTN1-203ENST00000395090 EXOC8Q8IYI6 725 aa12.54□□□□□ -0.4
RTN1-203ENST00000395090 CD99L2Q8TCZ2 262 aa12.54□□□□□ -0.4
RTN1-203ENST00000395090 ANP32BQ92688 251 aaKnown RBP12.54□□□□□ -0.4
RTN1-203ENST00000395090 KCNN1Q92952 543 aa12.54□□□□□ -0.4
RTN1-203ENST00000395090 ERO1AQ96HE7 468 aa12.54□□□□□ -0.4
RTN1-203ENST00000395090 PDLIM2Q96JY6 352 aa12.54□□□□□ -0.4
RTN1-203ENST00000395090 NIF3L1Q9GZT8 377 aa12.54□□□□□ -0.4
RTN1-203ENST00000395090 RNPEPQ9H4A4 650 aa12.54□□□□□ -0.4
RTN1-203ENST00000395090 ATP6V0A4Q9HBG4 840 aa12.54□□□□□ -0.4
RTN1-203ENST00000395090 SAMSN1Q9NSI8 373 aaKnown RBP12.54□□□□□ -0.4
RTN1-203ENST00000395090 NDFIP2Q9NV92 336 aa12.54□□□□□ -0.4
RTN1-203ENST00000395090 ZSWIM8A7E2V4 1837 aa12.54□□□□□ -0.4
RTN1-203ENST00000395090 IGKV6-21A0A0C4DH24 114 aa12.53□□□□□ -0.4
RTN1-203ENST00000395090 XYLBO75191 536 aa12.53□□□□□ -0.4
RTN1-203ENST00000395090 DUSP11O75319 330 aaKnown RBP12.53□□□□□ -0.4
RTN1-203ENST00000395090 MAFO75444 373 aaPredicted RBP12.53□□□□□ -0.4
RTN1-203ENST00000395090 ATP1A3P13637 1013 aa12.53□□□□□ -0.4
RTN1-203ENST00000395090 AKR1A1P14550 325 aa12.53□□□□□ -0.4
RTN1-203ENST00000395090 HSPA6P17066 643 aa12.53□□□□□ -0.4
RTN1-203ENST00000395090 ARL2P36404 184 aa12.53□□□□□ -0.4
RTN1-203ENST00000395090 MAP2K1Q02750 393 aaPredicted RBP12.53□□□□□ -0.4
RTN1-203ENST00000395090 SFSWAPQ12872 951 aaKnown RBP12.53□□□□□ -0.4
RTN1-203ENST00000395090 ARHGEF6Q15052 776 aa12.53□□□□□ -0.4
RTN1-203ENST00000395090 KNOP1Q1ED39 458 aaKnown RBP12.53□□□□□ -0.4
RTN1-203ENST00000395090 FAM102BQ5T8I3 360 aa12.53□□□□□ -0.4
RTN1-203ENST00000395090 PDE12Q6L8Q7 609 aaKnown RBP12.53□□□□□ -0.4
RTN1-203ENST00000395090 MAEAQ7L5Y9 396 aa12.53□□□□□ -0.4
RTN1-203ENST00000395090 IRF2BP1Q8IU81 584 aa12.53□□□□□ -0.4
RTN1-203ENST00000395090 SLC17A8Q8NDX2 589 aa12.53□□□□□ -0.4
RTN1-203ENST00000395090 ZNF296Q8WUU4 475 aaPredicted RBP12.53□□□□□ -0.4
RTN1-203ENST00000395090 ABHD17AQ96GS6 310 aa12.53□□□□□ -0.4
RTN1-203ENST00000395090 PPP1R9BQ96SB3 815 aa12.53□□□□□ -0.4
RTN1-203ENST00000395090 GPRC5CQ9NQ84 441 aa12.53□□□□□ -0.4
RTN1-203ENST00000395090 KCNG1Q9UIX4 513 aa12.53□□□□□ -0.4
RTN1-203ENST00000395090 CDC14CA4D256 554 aa12.52□□□□□ -0.4
RTN1-203ENST00000395090 TRIM49BA6NDI0 452 aa12.52□□□□□ -0.4
RTN1-203ENST00000395090 ADCY5O95622 1261 aa12.52□□□□□ -0.4
RTN1-203ENST00000395090 MYBP10242 640 aa12.52□□□□□ -0.4
RTN1-203ENST00000395090 NMT1P30419 496 aaKnown RBP12.52□□□□□ -0.4
RTN1-203ENST00000395090 POLGP54098 1239 aaPredicted RBP12.52□□□□□ -0.4
RTN1-203ENST00000395090 CACNB2Q08289 660 aaPredicted RBP12.52□□□□□ -0.4
RTN1-203ENST00000395090 ALCAMQ13740 583 aa12.52□□□□□ -0.4
RTN1-203ENST00000395090 EMC2Q15006 297 aa12.52□□□□□ -0.4
RTN1-203ENST00000395090 ZNF484Q5JVG2 852 aa12.52□□□□□ -0.4
RTN1-203ENST00000395090 MAP3K21Q5TCX8 1036 aa12.52□□□□□ -0.4
RTN1-203ENST00000395090 TLK2Q86UE8 772 aa12.52□□□□□ -0.4
RTN1-203ENST00000395090 NOC3LQ8WTT2 800 aaKnown RBP12.52□□□□□ -0.4
RTN1-203ENST00000395090 SLC7A3Q8WY07 619 aa12.52□□□□□ -0.4
RTN1-203ENST00000395090 THAP9Q9H5L6 903 aa12.52□□□□□ -0.4
RTN1-203ENST00000395090 ATXN7L1Q9ULK2 861 aaPredicted RBP12.52□□□□□ -0.4
RTN1-203ENST00000395090 TRAF3IP3Q9Y228 551 aa12.52□□□□□ -0.4
RTN1-203ENST00000395090 CASP8AP2Q9UKL3 1982 aa12.52□□□□□ -0.4
RTN1-203ENST00000395090 PDXKO00764 312 aa12.51□□□□□ -0.41
RTN1-203ENST00000395090 SEPT4O43236 478 aa12.51□□□□□ -0.41
RTN1-203ENST00000395090 GAS2O43903 313 aaKnown RBP12.51□□□□□ -0.41
RTN1-203ENST00000395090 GCNT3O95395 438 aa12.51□□□□□ -0.41
RTN1-203ENST00000395090 SCP2P22307 547 aa12.51□□□□□ -0.41
RTN1-203ENST00000395090 MARK3P27448 753 aa12.51□□□□□ -0.41
RTN1-203ENST00000395090 NPTX2P47972 431 aa12.51□□□□□ -0.41
RTN1-203ENST00000395090 CPT1AP50416 773 aa12.51□□□□□ -0.41
RTN1-203ENST00000395090 NCKAP1LP55160 1127 aa12.51□□□□□ -0.41
RTN1-203ENST00000395090 PRMT2P55345 433 aa12.51□□□□□ -0.41
RTN1-203ENST00000395090 GTF2BQ00403 316 aa12.51□□□□□ -0.41
RTN1-203ENST00000395090 FANCCQ00597 558 aa12.51□□□□□ -0.41
RTN1-203ENST00000395090 EDRF1Q3B7T1 1238 aa12.51□□□□□ -0.41
RTN1-203ENST00000395090 FOXR1Q6PIV2 292 aa12.51□□□□□ -0.41
RTN1-203ENST00000395090 XKR5Q6UX68 686 aa12.51□□□□□ -0.41
RTN1-203ENST00000395090 STXBP4Q6ZWJ1 553 aa12.51□□□□□ -0.41
RTN1-203ENST00000395090 APTXQ7Z2E3 356 aaKnown RBP12.51□□□□□ -0.41
RTN1-203ENST00000395090 ZNF438Q7Z4V0 828 aa12.51□□□□□ -0.41
RTN1-203ENST00000395090 ZC3H3Q8IXZ2 948 aaKnown RBP12.51□□□□□ -0.41
RTN1-203ENST00000395090 GIPC2Q8TF65 315 aa12.51□□□□□ -0.41
RTN1-203ENST00000395090 TMEM174Q8WUU8 243 aa12.51□□□□□ -0.41
RTN1-203ENST00000395090 SRRTQ9BXP5 876 aaKnown RBP12.51□□□□□ -0.41
RTN1-203ENST00000395090 AP5M1Q9H0R1 490 aa12.51□□□□□ -0.41
RTN1-203ENST00000395090 UPF3AQ9H1J1 476 aaKnown RBP12.51□□□□□ -0.41
RTN1-203ENST00000395090 ZNF215Q9UL58 517 aaPredicted RBP12.51□□□□□ -0.41
RTN1-203ENST00000395090 UBE4BO95155 1302 aa12.51□□□□□ -0.41
RTN1-203ENST00000395090 TGFB1I1O43294 461 aa12.51□□□□□ -0.41
RTN1-203ENST00000395090 ADCY3O60266 1144 aa12.51□□□□□ -0.41
RTN1-203ENST00000395090 PRPF6O94906 941 aaKnown RBP12.51□□□□□ -0.41
RTN1-203ENST00000395090 F2P00734 622 aa12.51□□□□□ -0.41
RTN1-203ENST00000395090 INSRRP14616 1297 aa12.51□□□□□ -0.41
RTN1-203ENST00000395090 CDK11BP21127 795 aaKnown RBP12.51□□□□□ -0.41
RTN1-203ENST00000395090 MAPK8P45983 427 aa12.51□□□□□ -0.41
RTN1-203ENST00000395090 ZNF75DP51815 510 aa12.51□□□□□ -0.41
RTN1-203ENST00000395090 PEX3P56589 373 aa12.51□□□□□ -0.41
RTN1-203ENST00000395090 GJA9P57773 515 aa12.51□□□□□ -0.41
RTN1-203ENST00000395090 FKBP3Q00688 224 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms