RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 SDHBP21912 280 aa6.9□□□□□ -1.31
SMARCAD1-203ENST00000394961 U2AF2P26368 475 aaKnown RBP eCLIP6.9□□□□□ -1.317e-7■□□□□ 9.2
SMARCAD1-203ENST00000394961 KLRC2P26717 231 aa6.9□□□□□ -1.31
SMARCAD1-203ENST00000394961 RPL9P32969 192 aaKnown RBP6.9□□□□□ -1.31
SMARCAD1-203ENST00000394961 CCT2P78371 535 aaKnown RBP6.9□□□□□ -1.31
SMARCAD1-203ENST00000394961 RBM10P98175 930 aaKnown RBP6.9□□□□□ -1.31
SMARCAD1-203ENST00000394961 XKR9Q5GH70 373 aa6.9□□□□□ -1.31
SMARCAD1-203ENST00000394961 SLC8B1Q6J4K2 584 aa6.9□□□□□ -1.31
SMARCAD1-203ENST00000394961 DCLRE1AQ6PJP8 1040 aa6.9□□□□□ -1.31
SMARCAD1-203ENST00000394961 ZBTB8OSQ8IWT0 167 aa6.9□□□□□ -1.31
SMARCAD1-203ENST00000394961 ERMNQ8TAM6 284 aa6.9□□□□□ -1.31
SMARCAD1-203ENST00000394961 SPIRE2Q8WWL2 714 aa6.9□□□□□ -1.31
SMARCAD1-203ENST00000394961 LPPQ93052 612 aa6.9□□□□□ -1.31
SMARCAD1-203ENST00000394961 E2F7Q96AV8 911 aa6.9□□□□□ -1.31
SMARCAD1-203ENST00000394961 ZSCAN31Q96LW9 406 aaPredicted RBP6.9□□□□□ -1.31
SMARCAD1-203ENST00000394961 NELL2Q99435 816 aa6.9□□□□□ -1.31
SMARCAD1-203ENST00000394961 MIOSQ9NXC5 875 aa6.9□□□□□ -1.31
SMARCAD1-203ENST00000394961 GDE1Q9NZC3 331 aa6.9□□□□□ -1.31
SMARCAD1-203ENST00000394961 CNTN3Q9P232 1028 aa6.9□□□□□ -1.31
SMARCAD1-203ENST00000394961 BRWD1Q9NSI6 2320 aa6.9□□□□□ -1.31
SMARCAD1-203ENST00000394961 MEIS3P2A8K0S8 358 aa6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 ABLIM1O14639 778 aa6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 PTGESO14684 152 aa6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 CHMP2AO43633 222 aa6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 GFRA3O60609 400 aa6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 PIGRP01833 764 aa6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 TDGF1P13385 188 aa6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 FGFR4P22455 802 aa6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 HOXA6P31267 233 aa6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 AARSP49588 968 aaKnown RBP eCLIP6.89□□□□□ -1.314e-6■■■■■ 30.6
SMARCAD1-203ENST00000394961 NPEPPSP55786 919 aa6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 HMGN5P82970 282 aaKnown RBP6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 EARS2Q5JPH6 523 aaKnown RBP6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 HAUS3Q68CZ6 603 aa6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 ELSPBP1Q96BH3 223 aa6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 NLRP4Q96MN2 994 aa6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 EIF2AQ9BY44 585 aaKnown RBP6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 OBP2AQ9NY56 170 aa6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 ORC3Q9UBD5 711 aaPredicted RBP6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 ZMYM5Q9UJ78 669 aa6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 CDH7Q9ULB5 785 aa6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 RBM19Q9Y4C8 960 aaKnown RBP6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 LRP3O75074 770 aa6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 N4BP1O75113 896 aaKnown RBP6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 PFKPQ01813 784 aa6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 RNASELQ05823 741 aaKnown RBP6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 TPGS2Q68CL5 300 aa6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 LLGL2Q6P1M3 1020 aa6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 SLC44A3Q8N4M1 653 aa6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 OXER1Q8TDS5 423 aa6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 SCLT1Q96NL6 688 aa6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 POLR3FQ9H1D9 316 aaPredicted RBP6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 SLC38A7Q9NVC3 462 aa6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 ARHGAP28Q9P2N2 729 aa6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 EYSQ5T1H1 3165 aa6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 TGM5O43548 720 aa6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 MCF2P10911 925 aa6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 GUCY2CP25092 1073 aa6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 AK2P54819 239 aa6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 ST3GAL1Q11201 340 aa6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 PRSS36Q5K4E3 855 aa6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 PIK3AP1Q6ZUJ8 805 aa6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 KSR1Q8IVT5 923 aa6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 SPATA18Q8TC71 538 aa6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 TTC12Q9H892 705 aaPredicted RBP6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 PLEKHA5Q9HAU0 1116 aa6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 SH2B1Q9NRF2 756 aaPredicted RBP6.89□□□□□ -1.31
SMARCAD1-203ENST00000394961 ATOH1Q92858 354 aaPredicted RBP6.88□□□□□ -1.31
SMARCAD1-203ENST00000394961 TMEM143Q96AN5 459 aa6.88□□□□□ -1.31
SMARCAD1-203ENST00000394961 AIFM3Q96NN9 605 aa6.88□□□□□ -1.31
SMARCAD1-203ENST00000394961 MYADMQ96S97 322 aa6.88□□□□□ -1.31
SMARCAD1-203ENST00000394961 CLSTN3Q9BQT9 956 aa6.88□□□□□ -1.31
SMARCAD1-203ENST00000394961 TTPALQ9BTX7 342 aa6.88□□□□□ -1.31
SMARCAD1-203ENST00000394961 KCNJ14Q9UNX9 436 aa6.88□□□□□ -1.31
SMARCAD1-203ENST00000394961 GINS2Q9Y248 185 aa6.88□□□□□ -1.31
SMARCAD1-203ENST00000394961 PCDHGA2Q9Y5H1 932 aa6.88□□□□□ -1.31
SMARCAD1-203ENST00000394961 TMEM150BA6NC51 233 aa6.88□□□□□ -1.31
SMARCAD1-203ENST00000394961 H0YCG3 227 aa6.88□□□□□ -1.31
SMARCAD1-203ENST00000394961 XYLBO75191 536 aa6.88□□□□□ -1.31
SMARCAD1-203ENST00000394961 FGF19O95750 216 aa6.88□□□□□ -1.31
SMARCAD1-203ENST00000394961 OR52Z1P0C646 297 aa6.88□□□□□ -1.31
SMARCAD1-203ENST00000394961 LRPAP1P30533 357 aa6.88□□□□□ -1.31
SMARCAD1-203ENST00000394961 MLH1P40692 756 aa6.88□□□□□ -1.31
SMARCAD1-203ENST00000394961 ME3Q16798 604 aa6.88□□□□□ -1.31
SMARCAD1-203ENST00000394961 UPP1Q16831 310 aa6.88□□□□□ -1.31
SMARCAD1-203ENST00000394961 NCAPH2Q6IBW4 605 aa6.88□□□□□ -1.31
SMARCAD1-203ENST00000394961 ZC3H14Q6PJT7 736 aaKnown RBP6.88□□□□□ -1.31
SMARCAD1-203ENST00000394961 POTEGQ6S5H5 508 aa6.88□□□□□ -1.31
SMARCAD1-203ENST00000394961 ANKS3Q6ZW76 656 aa6.88□□□□□ -1.31
SMARCAD1-203ENST00000394961 CATSPER3Q86XQ3 398 aa6.88□□□□□ -1.31
SMARCAD1-203ENST00000394961 TCEAL8Q8IYN2 117 aa6.88□□□□□ -1.31
SMARCAD1-203ENST00000394961 PJA1Q8NG27 643 aa6.88□□□□□ -1.31
SMARCAD1-203ENST00000394961 DERAQ9Y315 318 aa6.88□□□□□ -1.31
SMARCAD1-203ENST00000394961 CCDC195A0A1B0GUA6 201 aa6.88□□□□□ -1.31
SMARCAD1-203ENST00000394961 FOXD2O60548 495 aaPredicted RBP6.88□□□□□ -1.31
SMARCAD1-203ENST00000394961 CDC25AP30304 524 aa6.88□□□□□ -1.31
SMARCAD1-203ENST00000394961 ZPBP2Q6X784 338 aa6.88□□□□□ -1.31
SMARCAD1-203ENST00000394961 TAS1R1Q7RTX1 841 aa6.88□□□□□ -1.31
SMARCAD1-203ENST00000394961 PHOX2BQ99453 314 aa6.88□□□□□ -1.31
SMARCAD1-203ENST00000394961 RGL1Q9NZL6 768 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms