RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 AGO4Q9HCK5 861 aaKnown RBP17.63■□□□□ 0.41
SCN3B-202ENST00000392770 PPP2R3BQ9Y5P8 575 aa17.63■□□□□ 0.41
SCN3B-202ENST00000392770 HLA-DRAP01903 254 aa17.63■□□□□ 0.41
SCN3B-202ENST00000392770 CAV1Q03135 178 aa17.63■□□□□ 0.41
SCN3B-202ENST00000392770 ERGIC2Q96RQ1 377 aa17.63■□□□□ 0.41
SCN3B-202ENST00000392770 IDI2Q9BXS1 227 aa17.63■□□□□ 0.41
SCN3B-202ENST00000392770 BAIAP2L1Q9UHR4 511 aa17.63■□□□□ 0.41
SCN3B-202ENST00000392770 IQANK1A0A1B0GTG1 560 aa17.62■□□□□ 0.41
SCN3B-202ENST00000392770 HBP1O60381 514 aa17.62■□□□□ 0.41
SCN3B-202ENST00000392770 SLC1A1P43005 524 aa17.62■□□□□ 0.41
SCN3B-202ENST00000392770 RBP5P82980 135 aa17.62■□□□□ 0.41
SCN3B-202ENST00000392770 TRIM42Q8IWZ5 723 aa17.62■□□□□ 0.41
SCN3B-202ENST00000392770 FUCA2Q9BTY2 467 aa17.62■□□□□ 0.41
SCN3B-202ENST00000392770 AFDNP55196 1824 aaKnown RBP17.62■□□□□ 0.41
SCN3B-202ENST00000392770 ARHGAP42A6NI28 874 aa17.62■□□□□ 0.41
SCN3B-202ENST00000392770 GTF2A2P52657 109 aa17.62■□□□□ 0.41
SCN3B-202ENST00000392770 SEMA6BQ9H3T3 888 aa17.62■□□□□ 0.41
SCN3B-202ENST00000392770 SLITRK6Q9H5Y7 841 aa17.62■□□□□ 0.41
SCN3B-202ENST00000392770 STAP1Q9ULZ2 295 aa17.62■□□□□ 0.41
SCN3B-202ENST00000392770 MUTP22033 750 aa17.62■□□□□ 0.41
SCN3B-202ENST00000392770 PCK1P35558 622 aa17.62■□□□□ 0.41
SCN3B-202ENST00000392770 SPATA4Q8NEY3 305 aa17.62■□□□□ 0.41
SCN3B-202ENST00000392770 RAET1EQ8TD07 263 aa17.62■□□□□ 0.41
SCN3B-202ENST00000392770 TAF1DQ9H5J8 278 aaPredicted RBP17.62■□□□□ 0.41
SCN3B-202ENST00000392770 GPRC5CQ9NQ84 441 aa17.62■□□□□ 0.41
SCN3B-202ENST00000392770 KLHL11Q9NVR0 708 aa17.62■□□□□ 0.41
SCN3B-202ENST00000392770 IL18RAPO95256 599 aa17.62■□□□□ 0.41
SCN3B-202ENST00000392770 GYS2P54840 703 aa17.62■□□□□ 0.41
SCN3B-202ENST00000392770 IFT88Q13099 833 aa17.62■□□□□ 0.41
SCN3B-202ENST00000392770 DGKDQ16760 1214 aa17.62■□□□□ 0.41
SCN3B-202ENST00000392770 KLHL8Q9P2G9 620 aaPredicted RBP17.62■□□□□ 0.41
SCN3B-202ENST00000392770 FAM187AA6NFU0 413 aa17.61■□□□□ 0.41
SCN3B-202ENST00000392770 KRT14P02533 472 aa17.61■□□□□ 0.41
SCN3B-202ENST00000392770 C6orf222P0C671 652 aaPredicted RBP17.61■□□□□ 0.41
SCN3B-202ENST00000392770 SKA2Q8WVK7 121 aaPredicted RBP17.61■□□□□ 0.41
SCN3B-202ENST00000392770 SNF8Q96H20 258 aa17.61■□□□□ 0.41
SCN3B-202ENST00000392770 PI4K2AQ9BTU6 479 aa17.61■□□□□ 0.41
SCN3B-202ENST00000392770 VPS33BQ9H267 617 aa17.61■□□□□ 0.41
SCN3B-202ENST00000392770 CTSHP09668 335 aa17.61■□□□□ 0.41
SCN3B-202ENST00000392770 LAMC2Q13753 1193 aa17.61■□□□□ 0.41
SCN3B-202ENST00000392770 SPATA24Q86W54 205 aa17.61■□□□□ 0.41
SCN3B-202ENST00000392770 KIF13AQ9H1H9 1805 aa17.61■□□□□ 0.41
SCN3B-202ENST00000392770 WNT10BO00744 389 aa17.61■□□□□ 0.41
SCN3B-202ENST00000392770 S100BP04271 92 aaPredicted RBP17.61■□□□□ 0.41
SCN3B-202ENST00000392770 HUNKP57058 714 aa17.61■□□□□ 0.41
SCN3B-202ENST00000392770 ROR1Q01973 937 aa17.61■□□□□ 0.41
SCN3B-202ENST00000392770 PLCB4Q15147 1175 aa17.61■□□□□ 0.41
SCN3B-202ENST00000392770 SAMD3Q8N6K7 520 aa17.61■□□□□ 0.41
SCN3B-202ENST00000392770 GCNAQ96QF7 691 aa17.61■□□□□ 0.41
SCN3B-202ENST00000392770 GAKO14976 1311 aa17.61■□□□□ 0.41
SCN3B-202ENST00000392770 APPL2Q8NEU8 664 aa17.61■□□□□ 0.41
SCN3B-202ENST00000392770 EXOC4Q96A65 974 aa17.61■□□□□ 0.41
SCN3B-202ENST00000392770 LMO7Q8WWI1 1683 aa17.61■□□□□ 0.41
SCN3B-202ENST00000392770 SMIM22K7EJ46 135 aa17.61■□□□□ 0.41
SCN3B-202ENST00000392770 P4HA2O15460 535 aa17.61■□□□□ 0.41
SCN3B-202ENST00000392770 EPHX2P34913 555 aa17.61■□□□□ 0.41
SCN3B-202ENST00000392770 TRIM59Q8IWR1 403 aa17.61■□□□□ 0.41
SCN3B-202ENST00000392770 SNX9Q9Y5X1 595 aa17.61■□□□□ 0.41
SCN3B-202ENST00000392770 DLG5Q8TDM6 1919 aa17.61■□□□□ 0.41
SCN3B-202ENST00000392770 TARSL2A2RTX5 802 aaKnown RBP17.6■□□□□ 0.41
SCN3B-202ENST00000392770 PGK2P07205 417 aa17.6■□□□□ 0.41
SCN3B-202ENST00000392770 LIG3P49916 1009 aa17.6■□□□□ 0.41
SCN3B-202ENST00000392770 COG7P83436 770 aa17.6■□□□□ 0.41
SCN3B-202ENST00000392770 C1orf228Q6PIY5 440 aa17.6■□□□□ 0.41
SCN3B-202ENST00000392770 TLK1Q9UKI8 766 aa17.6■□□□□ 0.41
SCN3B-202ENST00000392770 WDR91A4D1P6 747 aa17.6■□□□□ 0.41
SCN3B-202ENST00000392770 F5H423 210 aaPredicted RBP17.6■□□□□ 0.41
SCN3B-202ENST00000392770 GPS1Q13098 491 aa17.6■□□□□ 0.41
SCN3B-202ENST00000392770 MMS22LQ6ZRQ5 1243 aa17.6■□□□□ 0.41
SCN3B-202ENST00000392770 ERO1BQ86YB8 467 aa17.6■□□□□ 0.41
SCN3B-202ENST00000392770 SYN2Q92777 582 aaPredicted RBP17.6■□□□□ 0.41
SCN3B-202ENST00000392770 LRRC1Q9BTT6 524 aa17.6■□□□□ 0.41
SCN3B-202ENST00000392770 SUPT20HL2P0C7V6 817 aa17.6■□□□□ 0.41
SCN3B-202ENST00000392770 RAB44Q7Z6P3 723 aaPredicted RBP17.6■□□□□ 0.41
SCN3B-202ENST00000392770 HDAC11Q96DB2 347 aa17.6■□□□□ 0.41
SCN3B-202ENST00000392770 TM4SF1P30408 202 aa17.6■□□□□ 0.41
SCN3B-202ENST00000392770 PSMD6Q15008 389 aa17.6■□□□□ 0.41
SCN3B-202ENST00000392770 SYTL5Q8TDW5 730 aaPredicted RBP17.6■□□□□ 0.41
SCN3B-202ENST00000392770 TNIP3Q96KP6 325 aa17.6■□□□□ 0.41
SCN3B-202ENST00000392770 DHX35Q9H5Z1 703 aaKnown RBP17.6■□□□□ 0.41
SCN3B-202ENST00000392770 C17orf75Q9HAS0 396 aa17.6■□□□□ 0.41
SCN3B-202ENST00000392770 UVRAGQ9P2Y5 699 aa17.6■□□□□ 0.41
SCN3B-202ENST00000392770 DISP2A7MBM2 1401 aa17.6■□□□□ 0.41
SCN3B-202ENST00000392770 TOM1L1O75674 476 aa17.59■□□□□ 0.41
SCN3B-202ENST00000392770 DHX34Q14147 1143 aaKnown RBP17.59■□□□□ 0.41
SCN3B-202ENST00000392770 PGM5Q15124 567 aa17.59■□□□□ 0.41
SCN3B-202ENST00000392770 LRP10Q7Z4F1 713 aa17.59■□□□□ 0.41
SCN3B-202ENST00000392770 TADA3O75528 432 aa17.59■□□□□ 0.41
SCN3B-202ENST00000392770 VIL1P09327 827 aaKnown RBP17.59■□□□□ 0.41
SCN3B-202ENST00000392770 KRT3P12035 628 aa17.59■□□□□ 0.41
SCN3B-202ENST00000392770 XPAP23025 273 aaPredicted RBP17.59■□□□□ 0.41
SCN3B-202ENST00000392770 EFHC2Q5JST6 749 aa17.59■□□□□ 0.41
SCN3B-202ENST00000392770 AFG1LQ8WV93 481 aa17.59■□□□□ 0.41
SCN3B-202ENST00000392770 SENP7Q9BQF6 1050 aa17.59■□□□□ 0.41
SCN3B-202ENST00000392770 AMACRQ9UHK6 382 aa17.59■□□□□ 0.41
SCN3B-202ENST00000392770 ATRNO75882 1429 aa17.59■□□□□ 0.41
SCN3B-202ENST00000392770 KRT17Q04695 432 aa17.59■□□□□ 0.41
SCN3B-202ENST00000392770 TTI2Q6NXR4 508 aa17.59■□□□□ 0.41
SCN3B-202ENST00000392770 ZBED2Q9BTP6 218 aa17.59■□□□□ 0.41
SCN3B-202ENST00000392770 TARS2Q9BW92 718 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms