RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 NLRP4Q96MN2 994 aa23.08■■□□□ 1.29
SPHK1-202ENST00000392496 TTLL13PA6NNM8 815 aa23.07■■□□□ 1.28
SPHK1-202ENST00000392496 DDX3XO00571 662 aaKnown RBP eCLIP23.07■■□□□ 1.284e-10■■■■■ 29.4
SPHK1-202ENST00000392496 ADCY6O43306 1168 aa23.07■■□□□ 1.28
SPHK1-202ENST00000392496 AOC2O75106 756 aa23.07■■□□□ 1.28
SPHK1-202ENST00000392496 MFAP3P55082 362 aa23.07■■□□□ 1.28
SPHK1-202ENST00000392496 MCL1Q07820 350 aa23.07■■□□□ 1.28
SPHK1-202ENST00000392496 IFNLR1Q8IU57 520 aaPredicted RBP23.07■■□□□ 1.28
SPHK1-202ENST00000392496 SLC30A5Q8TAD4 765 aa23.07■■□□□ 1.28
SPHK1-202ENST00000392496 FAM81BQ96LP2 452 aa23.07■■□□□ 1.28
SPHK1-202ENST00000392496 ALS2CR12Q96Q35 445 aa23.07■■□□□ 1.28
SPHK1-202ENST00000392496 BEGAINQ9BUH8 593 aa23.07■■□□□ 1.28
SPHK1-202ENST00000392496 FLRT1Q9NZU1 646 aa23.07■■□□□ 1.28
SPHK1-202ENST00000392496 GNEQ9Y223 722 aaKnown RBP23.07■■□□□ 1.28
SPHK1-202ENST00000392496 MOCS3O95396 460 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 C4BPAP04003 597 aaKnown RBP23.06■■□□□ 1.28
SPHK1-202ENST00000392496 GJB1P08034 283 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 ZNF865P0CJ78 1059 aaPredicted RBP23.06■■□□□ 1.28
SPHK1-202ENST00000392496 TNNI1P19237 187 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 TMOD1P28289 359 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 PHKA2P46019 1235 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 WHAMMP3Q1A5X7 153 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 KIAA0753Q2KHM9 967 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 ZACNQ401N2 412 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 MTHFD1LQ6UB35 978 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 TSHZ1Q6ZSZ6 1077 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 TRAPPC11Q7Z392 1133 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 BRSK2Q8IWQ3 736 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 LRRN4CLQ8ND94 238 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 OLIG1Q8TAK6 271 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 ZBTB10Q96DT7 871 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 NOX5Q96PH1 765 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 CGRRF1Q99675 332 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 PDE11AQ9HCR9 933 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 INTUQ9ULD6 942 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 CAPN6Q9Y6Q1 641 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 CNTNAP2Q9UHC6 1331 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 A6NJR5 290 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 EFCAB8A8MWE9 144 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 TULP1O00294 542 aaPredicted RBP23.06■■□□□ 1.28
SPHK1-202ENST00000392496 ABLIM1O14639 778 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 OGTO15294 1046 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 FAM189A1O60320 539 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 TADA3O75528 432 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 PROZP22891 400 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 MBTD1Q05BQ5 628 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 PPFIA1Q13136 1202 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 ZBTB41Q5SVQ8 909 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 PRAMEF19Q5SWL8 479 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 ENOSF1Q7L5Y1 443 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 PPM1KQ8N3J5 372 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 CEP112Q8N8E3 955 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 HELQQ8TDG4 1101 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 ANKRD7Q92527 254 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 KREMEN1Q96MU8 473 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 APBA2Q99767 749 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 TCHPQ9BT92 498 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 PRMT7Q9NVM4 692 aaPredicted RBP23.06■■□□□ 1.28
SPHK1-202ENST00000392496 SALL4Q9UJQ4 1053 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 GJD2Q9UKL4 321 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 JRKLQ9Y4A0 524 aa23.06■■□□□ 1.28
SPHK1-202ENST00000392496 INO80B-WBP1J3KQ70 363 aa23.05■■□□□ 1.28
SPHK1-202ENST00000392496 ATP1A1P05023 1023 aaKnown RBP23.05■■□□□ 1.28
SPHK1-202ENST00000392496 WNT7BP56706 349 aa23.05■■□□□ 1.28
SPHK1-202ENST00000392496 NAA30Q147X3 362 aaPredicted RBP23.05■■□□□ 1.28
SPHK1-202ENST00000392496 GRIK4Q16099 956 aa23.05■■□□□ 1.28
SPHK1-202ENST00000392496 FAM187BQ17R55 369 aa23.05■■□□□ 1.28
SPHK1-202ENST00000392496 LNX1Q8TBB1 728 aaPredicted RBP23.05■■□□□ 1.28
SPHK1-202ENST00000392496 SHC3Q92529 594 aa23.05■■□□□ 1.28
SPHK1-202ENST00000392496 INO80BQ9C086 356 aaPredicted RBP23.05■■□□□ 1.28
SPHK1-202ENST00000392496 PTPRHQ9HD43 1115 aa23.05■■□□□ 1.28
SPHK1-202ENST00000392496 DYNC1LI2O43237 492 aaPredicted RBP23.04■■□□□ 1.28
SPHK1-202ENST00000392496 ECM2O94769 699 aaPredicted RBP23.04■■□□□ 1.28
SPHK1-202ENST00000392496 CYP2B6P20813 491 aa23.04■■□□□ 1.28
SPHK1-202ENST00000392496 AP3M2P53677 418 aa23.04■■□□□ 1.28
SPHK1-202ENST00000392496 CRHR2Q13324 411 aa23.04■■□□□ 1.28
SPHK1-202ENST00000392496 PRPF4BQ13523 1007 aaKnown RBP23.04■■□□□ 1.28
SPHK1-202ENST00000392496 ATF7IP2Q5U623 682 aa23.04■■□□□ 1.28
SPHK1-202ENST00000392496 MPZL3Q6UWV2 235 aa23.04■■□□□ 1.28
SPHK1-202ENST00000392496 FAM71AQ8IYT1 594 aa23.04■■□□□ 1.28
SPHK1-202ENST00000392496 KAT5Q92993 513 aa23.04■■□□□ 1.28
SPHK1-202ENST00000392496 PACSIN1Q9BY11 444 aa23.04■■□□□ 1.28
SPHK1-202ENST00000392496 IFT122Q9HBG6 1241 aa23.04■■□□□ 1.28
SPHK1-202ENST00000392496 RRN3P2A6NIE6 340 aa23.04■■□□□ 1.28
SPHK1-202ENST00000392496 ENC1O14682 589 aa23.04■■□□□ 1.28
SPHK1-202ENST00000392496 TNPO2O14787 897 aaKnown RBP23.04■■□□□ 1.28
SPHK1-202ENST00000392496 IGHA2P01877 340 aa23.04■■□□□ 1.28
SPHK1-202ENST00000392496 HARSP12081 509 aaKnown RBP23.04■■□□□ 1.28
SPHK1-202ENST00000392496 GCNT1Q02742 428 aa23.04■■□□□ 1.28
SPHK1-202ENST00000392496 SURF1Q15526 300 aa23.04■■□□□ 1.28
SPHK1-202ENST00000392496 SRGAP1Q7Z6B7 1085 aa23.04■■□□□ 1.28
SPHK1-202ENST00000392496 ZBTB33Q86T24 672 aa23.04■■□□□ 1.28
SPHK1-202ENST00000392496 U2AF1L4Q8WU68 220 aaKnown RBP23.04■■□□□ 1.28
SPHK1-202ENST00000392496 AKT3Q9Y243 479 aa23.04■■□□□ 1.28
SPHK1-202ENST00000392496 TNFSF13BQ9Y275 285 aa23.04■■□□□ 1.28
SPHK1-202ENST00000392496 SAR1BQ9Y6B6 198 aa23.04■■□□□ 1.28
SPHK1-202ENST00000392496 HLA-DRAP01903 254 aa23.03■■□□□ 1.28
SPHK1-202ENST00000392496 H2AFZP0C0S5 128 aa23.03■■□□□ 1.28
SPHK1-202ENST00000392496 TNFAIP3P21580 790 aa23.03■■□□□ 1.28
SPHK1-202ENST00000392496 CCL14Q16627 93 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms