RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 BMS1Q14692 1282 aaKnown RBP12.38□□□□□ -0.43
SMARCAL1-203ENST00000392128 KIF22Q14807 665 aa12.38□□□□□ -0.43
SMARCAL1-203ENST00000392128 GRIK4Q16099 956 aa12.38□□□□□ -0.43
SMARCAL1-203ENST00000392128 FAM187BQ17R55 369 aa12.38□□□□□ -0.43
SMARCAL1-203ENST00000392128 TAS1R2Q8TE23 839 aa12.38□□□□□ -0.43
SMARCAL1-203ENST00000392128 ERO1AQ96HE7 468 aa12.38□□□□□ -0.43
SMARCAL1-203ENST00000392128 Q9Y3F1 56 aa12.38□□□□□ -0.43
SMARCAL1-203ENST00000392128 FOXN3O00409 490 aaPredicted RBP12.38□□□□□ -0.43
SMARCAL1-203ENST00000392128 DYNC1LI2O43237 492 aaPredicted RBP12.38□□□□□ -0.43
SMARCAL1-203ENST00000392128 F2P00734 622 aa12.38□□□□□ -0.43
SMARCAL1-203ENST00000392128 CYP2C19P33261 490 aa12.38□□□□□ -0.43
SMARCAL1-203ENST00000392128 WNT7BP56706 349 aa12.38□□□□□ -0.43
SMARCAL1-203ENST00000392128 GRM1Q13255 1194 aa12.38□□□□□ -0.43
SMARCAL1-203ENST00000392128 NAB2Q15742 525 aa12.38□□□□□ -0.43
SMARCAL1-203ENST00000392128 ARHGAP44Q17R89 818 aa12.38□□□□□ -0.43
SMARCAL1-203ENST00000392128 ZACNQ401N2 412 aa12.38□□□□□ -0.43
SMARCAL1-203ENST00000392128 ZBTB41Q5SVQ8 909 aa12.38□□□□□ -0.43
SMARCAL1-203ENST00000392128 TLK2Q86UE8 772 aa12.38□□□□□ -0.43
SMARCAL1-203ENST00000392128 RNF10Q8N5U6 811 aaKnown RBP12.38□□□□□ -0.43
SMARCAL1-203ENST00000392128 ZNF516Q92618 1163 aa12.38□□□□□ -0.43
SMARCAL1-203ENST00000392128 NT5C1BQ96P26 610 aa12.38□□□□□ -0.43
SMARCAL1-203ENST00000392128 SYT11Q9BT88 431 aa12.38□□□□□ -0.43
SMARCAL1-203ENST00000392128 IFT122Q9HBG6 1241 aa12.38□□□□□ -0.43
SMARCAL1-203ENST00000392128 PTPRHQ9HD43 1115 aa12.38□□□□□ -0.43
SMARCAL1-203ENST00000392128 PRMT7Q9NVM4 692 aaPredicted RBP12.38□□□□□ -0.43
SMARCAL1-203ENST00000392128 NAGPAQ9UK23 515 aa12.38□□□□□ -0.43
SMARCAL1-203ENST00000392128 CNTNAP2Q9UHC6 1331 aa12.38□□□□□ -0.43
SMARCAL1-203ENST00000392128 MACROD2A1Z1Q3 448 aa12.37□□□□□ -0.43
SMARCAL1-203ENST00000392128 RRN3P2A6NIE6 340 aa12.37□□□□□ -0.43
SMARCAL1-203ENST00000392128 INO80B-WBP1J3KQ70 363 aa12.37□□□□□ -0.43
SMARCAL1-203ENST00000392128 OGTO15294 1046 aa12.37□□□□□ -0.43
SMARCAL1-203ENST00000392128 ALDH1A1P00352 501 aa12.37□□□□□ -0.43
SMARCAL1-203ENST00000392128 C4BPAP04003 597 aaKnown RBP12.37□□□□□ -0.43
SMARCAL1-203ENST00000392128 CTGFP29279 349 aa12.37□□□□□ -0.43
SMARCAL1-203ENST00000392128 MFAP3P55082 362 aa12.37□□□□□ -0.43
SMARCAL1-203ENST00000392128 PRPF4BQ13523 1007 aaKnown RBP12.37□□□□□ -0.43
SMARCAL1-203ENST00000392128 MARCH8Q5T0T0 291 aa12.37□□□□□ -0.43
SMARCAL1-203ENST00000392128 MPZL3Q6UWV2 235 aa12.37□□□□□ -0.43
SMARCAL1-203ENST00000392128 BRSK2Q8IWQ3 736 aa12.37□□□□□ -0.43
SMARCAL1-203ENST00000392128 TRIM58Q8NG06 486 aa12.37□□□□□ -0.43
SMARCAL1-203ENST00000392128 OLIG1Q8TAK6 271 aa12.37□□□□□ -0.43
SMARCAL1-203ENST00000392128 HELQQ8TDG4 1101 aa12.37□□□□□ -0.43
SMARCAL1-203ENST00000392128 FAM81BQ96LP2 452 aa12.37□□□□□ -0.43
SMARCAL1-203ENST00000392128 ZIC5Q96T25 663 aa12.37□□□□□ -0.43
SMARCAL1-203ENST00000392128 CGRRF1Q99675 332 aa12.37□□□□□ -0.43
SMARCAL1-203ENST00000392128 INO80BQ9C086 356 aaPredicted RBP12.37□□□□□ -0.43
SMARCAL1-203ENST00000392128 PDE11AQ9HCR9 933 aa12.37□□□□□ -0.43
SMARCAL1-203ENST00000392128 BTNL10A8MVZ5 291 aa12.37□□□□□ -0.43
SMARCAL1-203ENST00000392128 TNNI1P19237 187 aa12.37□□□□□ -0.43
SMARCAL1-203ENST00000392128 ATF7IP2Q5U623 682 aa12.37□□□□□ -0.43
SMARCAL1-203ENST00000392128 SLC30A5Q8TAD4 765 aa12.37□□□□□ -0.43
SMARCAL1-203ENST00000392128 TCHPQ9BT92 498 aa12.37□□□□□ -0.43
SMARCAL1-203ENST00000392128 MINDY3Q9H8M7 445 aa12.37□□□□□ -0.43
SMARCAL1-203ENST00000392128 AKT3Q9Y243 479 aa12.37□□□□□ -0.43
SMARCAL1-203ENST00000392128 TNFSF13BQ9Y275 285 aa12.37□□□□□ -0.43
SMARCAL1-203ENST00000392128 MYH10P35580 1976 aa12.37□□□□□ -0.43
SMARCAL1-203ENST00000392128 ANK1P16157 1881 aa12.36□□□□□ -0.43
SMARCAL1-203ENST00000392128 ANO9A1A5B4 782 aa12.36□□□□□ -0.43
SMARCAL1-203ENST00000392128 DDX3XO00571 662 aaKnown RBP eCLIP12.36□□□□□ -0.43
SMARCAL1-203ENST00000392128 TACC1O75410 805 aa12.36□□□□□ -0.43
SMARCAL1-203ENST00000392128 CPT1AP50416 773 aa12.36□□□□□ -0.43
SMARCAL1-203ENST00000392128 AP3M2P53677 418 aa12.36□□□□□ -0.43
SMARCAL1-203ENST00000392128 AMPD2Q01433 879 aa12.36□□□□□ -0.43
SMARCAL1-203ENST00000392128 ALKBH5Q6P6C2 394 aaKnown RBP12.36□□□□□ -0.43
SMARCAL1-203ENST00000392128 ENOSF1Q7L5Y1 443 aa12.36□□□□□ -0.43
SMARCAL1-203ENST00000392128 ZBTB33Q86T24 672 aa12.36□□□□□ -0.43
SMARCAL1-203ENST00000392128 PPM1KQ8N3J5 372 aa12.36□□□□□ -0.43
SMARCAL1-203ENST00000392128 SHC3Q92529 594 aa12.36□□□□□ -0.43
SMARCAL1-203ENST00000392128 KREMEN1Q96MU8 473 aa12.36□□□□□ -0.43
SMARCAL1-203ENST00000392128 MAP7D2Q96T17 732 aa12.36□□□□□ -0.43
SMARCAL1-203ENST00000392128 CDC23Q9UJX2 597 aa12.36□□□□□ -0.43
SMARCAL1-203ENST00000392128 CPSF3Q9UKF6 684 aaKnown RBP12.36□□□□□ -0.43
SMARCAL1-203ENST00000392128 PTPRJQ12913 1337 aa12.36□□□□□ -0.43
SMARCAL1-203ENST00000392128 A0A087WZ62 844 aa12.36□□□□□ -0.43
SMARCAL1-203ENST00000392128 ZEB2O60315 1214 aa12.36□□□□□ -0.43
SMARCAL1-203ENST00000392128 IQCF3P0C7M6 154 aa12.36□□□□□ -0.43
SMARCAL1-203ENST00000392128 HARSP12081 509 aaKnown RBP12.36□□□□□ -0.43
SMARCAL1-203ENST00000392128 FCGRTP55899 365 aa12.36□□□□□ -0.43
SMARCAL1-203ENST00000392128 GCNT1Q02742 428 aa12.36□□□□□ -0.43
SMARCAL1-203ENST00000392128 KIAA0753Q2KHM9 967 aa12.36□□□□□ -0.43
SMARCAL1-203ENST00000392128 TDRD10Q5VZ19 366 aaKnown RBP12.36□□□□□ -0.43
SMARCAL1-203ENST00000392128 FAM71AQ8IYT1 594 aa12.36□□□□□ -0.43
SMARCAL1-203ENST00000392128 KAT2BQ92831 832 aa12.36□□□□□ -0.43
SMARCAL1-203ENST00000392128 KAT5Q92993 513 aa12.36□□□□□ -0.43
SMARCAL1-203ENST00000392128 ZNF668Q96K58 619 aaPredicted RBP12.36□□□□□ -0.43
SMARCAL1-203ENST00000392128 ALS2CR12Q96Q35 445 aa12.36□□□□□ -0.43
SMARCAL1-203ENST00000392128 FDXACB1Q9BRP7 624 aaPredicted RBP12.36□□□□□ -0.43
SMARCAL1-203ENST00000392128 INTUQ9ULD6 942 aa12.36□□□□□ -0.43
SMARCAL1-203ENST00000392128 CAPN6Q9Y6Q1 641 aa12.36□□□□□ -0.43
SMARCAL1-203ENST00000392128 NRCAMQ92823 1304 aa12.35□□□□□ -0.43
SMARCAL1-203ENST00000392128 TULP1O00294 542 aaPredicted RBP12.35□□□□□ -0.43
SMARCAL1-203ENST00000392128 B4GALT5O43286 388 aa12.35□□□□□ -0.43
SMARCAL1-203ENST00000392128 VTNP04004 478 aa12.35□□□□□ -0.43
SMARCAL1-203ENST00000392128 TNFSF9P41273 254 aa12.35□□□□□ -0.43
SMARCAL1-203ENST00000392128 SURF1Q15526 300 aa12.35□□□□□ -0.43
SMARCAL1-203ENST00000392128 AMHR2Q16671 573 aa12.35□□□□□ -0.43
SMARCAL1-203ENST00000392128 ZNF568Q3ZCX4 644 aa12.35□□□□□ -0.43
SMARCAL1-203ENST00000392128 PAPD7Q5XG87 772 aaKnown RBP12.35□□□□□ -0.43
SMARCAL1-203ENST00000392128 LMBRD2Q68DH5 695 aaPredicted RBP12.35□□□□□ -0.43
SMARCAL1-203ENST00000392128 ZNF410Q86VK4 478 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms