RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 GPR32O75388 356 aa4.06□□□□□ -1.76
RNU6-550P-201ENST00000391057 IL33O95760 270 aa4.06□□□□□ -1.76
RNU6-550P-201ENST00000391057 RAP2AP10114 183 aa4.06□□□□□ -1.76
RNU6-550P-201ENST00000391057 SLC6A9P48067 706 aa4.06□□□□□ -1.76
RNU6-550P-201ENST00000391057 SCNN1GP51170 649 aa4.06□□□□□ -1.76
RNU6-550P-201ENST00000391057 RABGGTBP53611 331 aa4.06□□□□□ -1.76
RNU6-550P-201ENST00000391057 TTF1Q15361 905 aaPredicted RBP4.06□□□□□ -1.76
RNU6-550P-201ENST00000391057 PLEKHG6Q3KR16 790 aa4.06□□□□□ -1.76
RNU6-550P-201ENST00000391057 NRN1LQ496H8 165 aa4.06□□□□□ -1.76
RNU6-550P-201ENST00000391057 USP39Q53GS9 565 aaKnown RBP4.06□□□□□ -1.76
RNU6-550P-201ENST00000391057 FAM47AQ5JRC9 791 aa4.06□□□□□ -1.76
RNU6-550P-201ENST00000391057 ODR4Q5SWX8 454 aa4.06□□□□□ -1.76
RNU6-550P-201ENST00000391057 RHOT1Q8IXI2 618 aa4.06□□□□□ -1.76
RNU6-550P-201ENST00000391057 CMTR2Q8IYT2 770 aaKnown RBP4.06□□□□□ -1.76
RNU6-550P-201ENST00000391057 CPA6Q8N4T0 437 aa4.06□□□□□ -1.76
RNU6-550P-201ENST00000391057 OR52N2Q8NGI0 321 aa4.06□□□□□ -1.76
RNU6-550P-201ENST00000391057 CCHCR1Q8TD31 782 aa4.06□□□□□ -1.76
RNU6-550P-201ENST00000391057 SH3RF3Q8TEJ3 882 aaPredicted RBP4.06□□□□□ -1.76
RNU6-550P-201ENST00000391057 COA7Q96BR5 231 aa4.06□□□□□ -1.76
RNU6-550P-201ENST00000391057 PGBD4Q96DM1 585 aa4.06□□□□□ -1.76
RNU6-550P-201ENST00000391057 CYFIP2Q96F07 1278 aa4.06□□□□□ -1.76
RNU6-550P-201ENST00000391057 SPON1Q9HCB6 807 aa4.06□□□□□ -1.76
RNU6-550P-201ENST00000391057 E2F8A0AVK6 867 aa4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 KLRG2A4D1S0 409 aaPredicted RBP4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 CCDC154A6NI56 674 aa4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 CXorf49A8MYA2 514 aaPredicted RBP4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 C1QTNF3-AMACRE9PGA6 284 aa4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 PJA2O43164 708 aa4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 HTRA2O43464 458 aaPredicted RBP4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 DTNBO60941 627 aa4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 ZRANB2O95218 330 aaKnown RBP eCLIP4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 S100BP04271 92 aaPredicted RBP4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 SNRPA1P09661 255 aaKnown RBP4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 CT47B1P0C2W7 299 aaPredicted RBP4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 ALOX15P16050 662 aaPredicted RBP4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 GUCY1A2P33402 732 aa4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 EPHB1P54762 984 aa4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 RAP2BP61225 183 aa4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 MCL1Q07820 350 aa4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 PIN1Q13526 163 aaPredicted RBP4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 RRP1BQ14684 758 aaKnown RBP4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 VPS72Q15906 364 aa4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 C3orf36Q3SXR2 165 aa4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 RRP12Q5JTH9 1297 aaKnown RBP4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 METTL24Q5JXM2 366 aa4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 LCE1DQ5T752 114 aa4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 AFMIDQ63HM1 303 aa4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 ANKS6Q68DC2 871 aa4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 PPP4R3AQ6IN85 833 aa4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 RNF207Q6ZRF8 634 aa4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 HTR3DQ70Z44 454 aa4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 RSPH3Q86UC2 560 aa4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 TMPRSS6Q8IU80 811 aa4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 C1orf210Q8IVY1 113 aa4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 CASKIN2Q8WXE0 1202 aa4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 STON2Q8WXE9 905 aa4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 TFAP2CQ92754 450 aa4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 HSPBAP1Q96EW2 488 aa4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 MNTQ99583 582 aa4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 CPEB1Q9BZB8 566 aaKnown RBP4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 KCNH6Q9H252 994 aa4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 TDP1Q9NUW8 608 aa4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 IP6K2Q9UHH9 426 aa4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 SERPINB13Q9UIV8 391 aa4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 LIMCH1Q9UPQ0 1083 aa4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 SIK3Q9Y2K2 1263 aa4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 IPPQ9Y573 584 aa4.05□□□□□ -1.76
RNU6-550P-201ENST00000391057 ATRNL1Q5VV63 1379 aa4.04□□□□□ -1.76
RNU6-550P-201ENST00000391057 MYBBP1AQ9BQG0 1328 aaKnown RBP4.04□□□□□ -1.76
RNU6-550P-201ENST00000391057 TBKBP1A7MCY6 615 aa4.04□□□□□ -1.76
RNU6-550P-201ENST00000391057 RPLP2P05387 115 aaKnown RBP4.04□□□□□ -1.76
RNU6-550P-201ENST00000391057 ATP5JP18859 108 aa4.04□□□□□ -1.76
RNU6-550P-201ENST00000391057 VCAM1P19320 739 aa4.04□□□□□ -1.76
RNU6-550P-201ENST00000391057 MGAT1P26572 445 aa4.04□□□□□ -1.76
RNU6-550P-201ENST00000391057 ALDH1A3P47895 512 aa4.04□□□□□ -1.76
RNU6-550P-201ENST00000391057 CLRN1P58418 232 aa4.04□□□□□ -1.76
RNU6-550P-201ENST00000391057 KRTAP10-2P60368 255 aa4.04□□□□□ -1.76
RNU6-550P-201ENST00000391057 CDC42EP1Q00587 391 aa4.04□□□□□ -1.76
RNU6-550P-201ENST00000391057 MTM1Q13496 603 aa4.04□□□□□ -1.76
RNU6-550P-201ENST00000391057 IL10RAQ13651 578 aa4.04□□□□□ -1.76
RNU6-550P-201ENST00000391057 ATP2B3Q16720 1220 aa4.04□□□□□ -1.76
RNU6-550P-201ENST00000391057 BMT2Q1RMZ1 405 aa4.04□□□□□ -1.76
RNU6-550P-201ENST00000391057 C1QL3Q5VWW1 255 aa4.04□□□□□ -1.76
RNU6-550P-201ENST00000391057 NAIF1Q69YI7 327 aaPredicted RBP4.04□□□□□ -1.76
RNU6-550P-201ENST00000391057 EFCAB12Q6NXP0 572 aa4.04□□□□□ -1.76
RNU6-550P-201ENST00000391057 GPRIN1Q7Z2K8 1008 aa4.04□□□□□ -1.76
RNU6-550P-201ENST00000391057 SPRED1Q7Z699 444 aa4.04□□□□□ -1.76
RNU6-550P-201ENST00000391057 DRC7Q8IY82 874 aa4.04□□□□□ -1.76
RNU6-550P-201ENST00000391057 RNF169Q8NCN4 708 aa4.04□□□□□ -1.76
RNU6-550P-201ENST00000391057 OR10H5Q8NGA6 315 aa4.04□□□□□ -1.76
RNU6-550P-201ENST00000391057 ZFP28Q8NHY6 868 aa4.04□□□□□ -1.76
RNU6-550P-201ENST00000391057 EXTL1Q92935 676 aa4.04□□□□□ -1.76
RNU6-550P-201ENST00000391057 KAT5Q92993 513 aa4.04□□□□□ -1.76
RNU6-550P-201ENST00000391057 TMX3Q96JJ7 454 aa4.04□□□□□ -1.76
RNU6-550P-201ENST00000391057 MRI1Q9BV20 369 aa4.04□□□□□ -1.76
RNU6-550P-201ENST00000391057 TCF7L1Q9HCS4 588 aa4.04□□□□□ -1.76
RNU6-550P-201ENST00000391057 POGKQ9P215 609 aa4.04□□□□□ -1.76
RNU6-550P-201ENST00000391057 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.04□□□□□ -1.76
RNU6-550P-201ENST00000391057 RUVBL1Q9Y265 456 aaKnown RBP4.04□□□□□ -1.76
RNU6-550P-201ENST00000391057 PCDHA13Q9Y5I0 950 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms