RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.7□□□□□ -1.82
TRAV39-201ENST00000390466 UBR3Q6ZT12 1888 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 DICER1Q9UPY3 1922 aaKnown RBP3.7□□□□□ -1.82
TRAV39-201ENST00000390466 UMODL1Q5DID0 1318 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 EP400Q96L91 3159 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 POTEB3A0JP26 581 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 TLDC2A0PJX2 215 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 LRRD1A4D1F6 860 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 USP17L3A6NCW0 530 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 USP17L4A6NCW7 530 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 SMIM23A6NLE4 172 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 MIF4GDA9UHW6 222 aaKnown RBP3.69□□□□□ -1.82
TRAV39-201ENST00000390466 POTECB2RU33 542 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 hCG_1984214I3L0E3 225 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 PODXLO00592 558 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 PDXKO00764 312 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 FSCN2O14926 492 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 SLC16A3O15427 465 aaKnown RBP3.69□□□□□ -1.82
TRAV39-201ENST00000390466 PRPF4O43172 522 aaKnown RBP eCLIP3.69□□□□□ -1.82
TRAV39-201ENST00000390466 TGFB1I1O43294 461 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 ATP9BO43861 1147 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 TYROBPO43914 113 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 CCNT1O60563 726 aaKnown RBP3.69□□□□□ -1.82
TRAV39-201ENST00000390466 ATP9AO75110 1047 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 HIP1RO75146 1068 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 TBX10O75333 385 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 ATP5HO75947 161 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 CBX6O95503 412 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 TTC4O95801 387 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 IL1BP01584 269 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 PDHA1P08559 390 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 PABPC4LP0CB38 370 aaKnown RBP3.69□□□□□ -1.82
TRAV39-201ENST00000390466 DHRS4L1P0CG22 281 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 SPATA31C1P0DKV0 1188 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 LMNB1P20700 586 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 NR2F2P24468 414 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 TARSP26639 723 aaKnown RBP3.69□□□□□ -1.82
TRAV39-201ENST00000390466 PRDX5P30044 214 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 RFC4P35249 363 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 VHLP40337 213 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 RAP1GDS1P52306 607 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 EMP3P54852 163 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 NAPAP54920 295 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 PPP4CP60510 307 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 MXRA7P84157 204 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 ATP11AP98196 1134 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 ARID5AQ03989 594 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 SULT2A1Q06520 285 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 KLF1Q13351 362 aaPredicted RBP3.69□□□□□ -1.82
TRAV39-201ENST00000390466 MSLNQ13421 630 aaPredicted RBP3.69□□□□□ -1.82
TRAV39-201ENST00000390466 GRM2Q14416 872 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 SF3B3Q15393 1217 aaKnown RBP3.69□□□□□ -1.82
TRAV39-201ENST00000390466 SLC1A5Q15758 541 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 ENOX2Q16206 610 aaKnown RBP3.69□□□□□ -1.82
TRAV39-201ENST00000390466 SLC15A2Q16348 729 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 GRIK5Q16478 980 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 CALCRLQ16602 461 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 PDK4Q16654 411 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 GSTA3Q16772 222 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 CCDC152Q4G0S7 254 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 HSF5Q4G112 596 aaPredicted RBP3.69□□□□□ -1.82
TRAV39-201ENST00000390466 KHDC1Q4VXA5 237 aaKnown RBP3.69□□□□□ -1.82
TRAV39-201ENST00000390466 ODF2Q5BJF6 829 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 SLC45A4Q5BKX6 768 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 C1orf220Q5T0J3 134 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 ARMC3Q5W041 872 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 ASTLQ6HA08 431 aaPredicted RBP3.69□□□□□ -1.82
TRAV39-201ENST00000390466 INTS5Q6P9B9 1019 aaKnown RBP3.69□□□□□ -1.82
TRAV39-201ENST00000390466 POTEBQ6S5H4 581 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 RNF111Q6ZNA4 994 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 LRRC74BQ6ZQY2 392 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 SEPT14Q6ZU15 432 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 MIGA2Q7L4E1 593 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 TAOK1Q7L7X3 1001 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 OTOAQ7RTW8 1153 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 USP17L1Q7RTZ2 530 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 PRUNE1Q86TP1 453 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 TRIM74Q86UV6 250 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 TRIM73Q86UV7 250 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 CADPS2Q86UW7 1296 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 TRABD2AQ86V40 505 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 SFR1Q86XK3 245 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 CCNJLQ8IV13 435 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 GLYCTKQ8IVS8 523 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 LMNTD2Q8IXW0 634 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 REXO1Q8N1G1 1221 aaKnown RBP3.69□□□□□ -1.82
TRAV39-201ENST00000390466 LARGE2Q8N3Y3 721 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 RIBC1Q8N443 379 aaPredicted RBP3.69□□□□□ -1.82
TRAV39-201ENST00000390466 ZNF713Q8N859 430 aaPredicted RBP3.69□□□□□ -1.82
TRAV39-201ENST00000390466 KLHL23Q8NBE8 558 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 NEDD1Q8NHV4 660 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 UHMK1Q8TAS1 419 aaKnown RBP3.69□□□□□ -1.82
TRAV39-201ENST00000390466 SNX29Q8TEQ0 813 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 FBF1Q8TES7 1133 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 SLC20A1Q8WUM9 679 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 WDR60Q8WVS4 1066 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 GJA10Q969M2 543 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 LENG9Q96B70 501 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 DYNLL2Q96FJ2 89 aa3.69□□□□□ -1.82
TRAV39-201ENST00000390466 SETDB2Q96T68 719 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms