RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 CLSTN3Q9BQT9 956 aa13.17□□□□□ -0.3
SOD1-202ENST00000389995 RTKNQ9BST9 563 aa13.17□□□□□ -0.3
SOD1-202ENST00000389995 SLC26A6Q9BXS9 759 aa13.17□□□□□ -0.3
SOD1-202ENST00000389995 PLA2G2FQ9BZM2 168 aa13.17□□□□□ -0.3
SOD1-202ENST00000389995 UBN1Q9NPG3 1134 aa13.17□□□□□ -0.3
SOD1-202ENST00000389995 FNIP2Q9P278 1114 aa13.17□□□□□ -0.3
SOD1-202ENST00000389995 FBXW11Q9UKB1 542 aa13.17□□□□□ -0.3
SOD1-202ENST00000389995 ADAM28Q9UKQ2 775 aa13.17□□□□□ -0.3
SOD1-202ENST00000389995 COL4A2P08572 1712 aa13.16□□□□□ -0.3
SOD1-202ENST00000389995 GREB1Q4ZG55 1949 aa13.16□□□□□ -0.3
SOD1-202ENST00000389995 SHISA7A6NL88 538 aa13.16□□□□□ -0.3
SOD1-202ENST00000389995 NR1I2O75469 434 aa13.16□□□□□ -0.3
SOD1-202ENST00000389995 C8AP07357 584 aa13.16□□□□□ -0.3
SOD1-202ENST00000389995 FGD1P98174 961 aa13.16□□□□□ -0.3
SOD1-202ENST00000389995 FZD5Q13467 585 aa13.16□□□□□ -0.3
SOD1-202ENST00000389995 PPM1LQ5SGD2 360 aa13.16□□□□□ -0.3
SOD1-202ENST00000389995 RNF20Q5VTR2 975 aa13.16□□□□□ -0.3
SOD1-202ENST00000389995 POTEHQ6S545 545 aa13.16□□□□□ -0.3
SOD1-202ENST00000389995 Q6ZUG5 572 aa13.16□□□□□ -0.3
SOD1-202ENST00000389995 MTSS1LQ765P7 747 aa13.16□□□□□ -0.3
SOD1-202ENST00000389995 ETNPPLQ8TBG4 499 aa13.16□□□□□ -0.3
SOD1-202ENST00000389995 BICD2Q8TD16 824 aa13.16□□□□□ -0.3
SOD1-202ENST00000389995 BRF1Q92994 677 aa13.16□□□□□ -0.3
SOD1-202ENST00000389995 CLDN23Q96B33 292 aa13.16□□□□□ -0.3
SOD1-202ENST00000389995 PHF20Q9BVI0 1012 aa13.16□□□□□ -0.3
SOD1-202ENST00000389995 DHX33Q9H6R0 707 aaKnown RBP13.16□□□□□ -0.3
SOD1-202ENST00000389995 HEBP1Q9NRV9 189 aa13.16□□□□□ -0.3
SOD1-202ENST00000389995 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.16□□□□□ -0.35e-10■□□□□ 11.3
SOD1-202ENST00000389995 ZFP37Q9Y6Q3 630 aaPredicted RBP13.16□□□□□ -0.3
SOD1-202ENST00000389995 ZFYVE26Q68DK2 2539 aa13.16□□□□□ -0.3
SOD1-202ENST00000389995 SPEGQ15772 3267 aa13.16□□□□□ -0.3
SOD1-202ENST00000389995 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.15□□□□□ -0.3
SOD1-202ENST00000389995 B4GALT5O43286 388 aa13.15□□□□□ -0.3
SOD1-202ENST00000389995 SLC37A4O43826 429 aa13.15□□□□□ -0.3
SOD1-202ENST00000389995 TADA2AO75478 443 aa13.15□□□□□ -0.3
SOD1-202ENST00000389995 QARSP47897 775 aaKnown RBP13.15□□□□□ -0.3
SOD1-202ENST00000389995 NLRP5P59047 1200 aa13.15□□□□□ -0.3
SOD1-202ENST00000389995 AKAP17AQ02040 695 aaKnown RBP13.15□□□□□ -0.3
SOD1-202ENST00000389995 EMC2Q15006 297 aa13.15□□□□□ -0.3
SOD1-202ENST00000389995 NTRK3Q16288 839 aa13.15□□□□□ -0.3
SOD1-202ENST00000389995 LIN9Q5TKA1 542 aa13.15□□□□□ -0.3
SOD1-202ENST00000389995 FERMT3Q86UX7 667 aa13.15□□□□□ -0.3
SOD1-202ENST00000389995 SKAP1Q86WV1 359 aa13.15□□□□□ -0.3
SOD1-202ENST00000389995 NPAS3Q8IXF0 933 aa13.15□□□□□ -0.3
SOD1-202ENST00000389995 CNNM3Q8NE01 707 aa13.15□□□□□ -0.3
SOD1-202ENST00000389995 SLC7A14Q8TBB6 771 aa13.15□□□□□ -0.3
SOD1-202ENST00000389995 MCRS1Q96EZ8 462 aa13.15□□□□□ -0.3
SOD1-202ENST00000389995 JPH2Q9BR39 696 aaPredicted RBP13.15□□□□□ -0.3
SOD1-202ENST00000389995 OSBPL6Q9BZF3 934 aa13.15□□□□□ -0.3
SOD1-202ENST00000389995 CSRNP2Q9H175 543 aa13.15□□□□□ -0.3
SOD1-202ENST00000389995 CXCL16Q9H2A7 254 aa13.15□□□□□ -0.3
SOD1-202ENST00000389995 SLKQ9H2G2 1235 aaPredicted RBP13.15□□□□□ -0.3
SOD1-202ENST00000389995 NCOA5Q9HCD5 579 aaKnown RBP13.15□□□□□ -0.3
SOD1-202ENST00000389995 PRMT8Q9NR22 394 aaPredicted RBP13.15□□□□□ -0.3
SOD1-202ENST00000389995 GMEB2Q9UKD1 530 aa13.15□□□□□ -0.3
SOD1-202ENST00000389995 NDRG2Q9UN36 371 aaKnown RBP13.15□□□□□ -0.3
SOD1-202ENST00000389995 WDFY3Q8IZQ1 3526 aa13.15□□□□□ -0.3
SOD1-202ENST00000389995 CCDC196A0A1B0GTZ2 297 aa13.14□□□□□ -0.31
SOD1-202ENST00000389995 CASTOR2A6NHX0 329 aa13.14□□□□□ -0.31
SOD1-202ENST00000389995 INO80B-WBP1J3KQ70 363 aa13.14□□□□□ -0.31
SOD1-202ENST00000389995 GDF9O60383 454 aa13.14□□□□□ -0.31
SOD1-202ENST00000389995 NPTXRO95502 500 aa13.14□□□□□ -0.31
SOD1-202ENST00000389995 ARF4P18085 180 aaPredicted RBP13.14□□□□□ -0.31
SOD1-202ENST00000389995 IGFBP6P24592 240 aaPredicted RBP13.14□□□□□ -0.31
SOD1-202ENST00000389995 CCT2P78371 535 aaKnown RBP13.14□□□□□ -0.31
SOD1-202ENST00000389995 PSMD5Q16401 504 aa13.14□□□□□ -0.31
SOD1-202ENST00000389995 FAM171A1Q5VUB5 890 aa13.14□□□□□ -0.31
SOD1-202ENST00000389995 NOTUMQ6P988 496 aa13.14□□□□□ -0.31
SOD1-202ENST00000389995 CCDC148Q8NFR7 591 aa13.14□□□□□ -0.31
SOD1-202ENST00000389995 LNX1Q8TBB1 728 aaPredicted RBP13.14□□□□□ -0.31
SOD1-202ENST00000389995 TRIM6Q9C030 488 aaPredicted RBP13.14□□□□□ -0.31
SOD1-202ENST00000389995 RGL1Q9NZL6 768 aa13.14□□□□□ -0.31
SOD1-202ENST00000389995 DNMT3BQ9UBC3 853 aaKnown RBP13.14□□□□□ -0.31
SOD1-202ENST00000389995 PARP2Q9UGN5 583 aa13.14□□□□□ -0.31
SOD1-202ENST00000389995 VAV3Q9UKW4 847 aa13.14□□□□□ -0.31
SOD1-202ENST00000389995 GIT1Q9Y2X7 761 aa13.14□□□□□ -0.31
SOD1-202ENST00000389995 ANKRD11Q6UB99 2663 aaPredicted RBP13.13□□□□□ -0.31
SOD1-202ENST00000389995 CYP3A7-CYP3A51PA0A087WV96 503 aa13.13□□□□□ -0.31
SOD1-202ENST00000389995 NRG2O14511 850 aaPredicted RBP13.13□□□□□ -0.31
SOD1-202ENST00000389995 TBC1D4O60343 1298 aa13.13□□□□□ -0.31
SOD1-202ENST00000389995 ABCB7O75027 752 aa13.13□□□□□ -0.31
SOD1-202ENST00000389995 KIF4AO95239 1232 aa13.13□□□□□ -0.31
SOD1-202ENST00000389995 C1RP00736 705 aa13.13□□□□□ -0.31
SOD1-202ENST00000389995 HNRNPA1P09651 372 aaKnown RBP eCLIP13.13□□□□□ -0.31
SOD1-202ENST00000389995 TDGF1P13385 188 aa13.13□□□□□ -0.31
SOD1-202ENST00000389995 CYP3A7P24462 503 aa13.13□□□□□ -0.31
SOD1-202ENST00000389995 RCAN1P53805 252 aa13.13□□□□□ -0.31
SOD1-202ENST00000389995 PFKPQ01813 784 aa13.13□□□□□ -0.31
SOD1-202ENST00000389995 MBTD1Q05BQ5 628 aa13.13□□□□□ -0.31
SOD1-202ENST00000389995 SRSF5Q13243 272 aaKnown RBP13.13□□□□□ -0.31
SOD1-202ENST00000389995 GRM2Q14416 872 aa13.13□□□□□ -0.31
SOD1-202ENST00000389995 HSP90AA2PQ14568 343 aaPredicted RBP13.13□□□□□ -0.31
SOD1-202ENST00000389995 AMHR2Q16671 573 aa13.13□□□□□ -0.31
SOD1-202ENST00000389995 SLC5A9Q2M3M2 681 aa13.13□□□□□ -0.31
SOD1-202ENST00000389995 XKR9Q5GH70 373 aa13.13□□□□□ -0.31
SOD1-202ENST00000389995 AXDND1Q5T1B0 1012 aaPredicted RBP13.13□□□□□ -0.31
SOD1-202ENST00000389995 TANGO2Q6ICL3 276 aa13.13□□□□□ -0.31
SOD1-202ENST00000389995 PRR23BQ6ZRT6 265 aa13.13□□□□□ -0.31
SOD1-202ENST00000389995 ASAP3Q8TDY4 903 aa13.13□□□□□ -0.31
SOD1-202ENST00000389995 TTPALQ9BTX7 342 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms