RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 MTMR9Q96QG7 549 aa20.13■□□□□ 0.81
PPFIA1-202ENST00000389547 PDCD2LQ9BRP1 358 aa20.13■□□□□ 0.81
PPFIA1-202ENST00000389547 GFPT2O94808 682 aa20.13■□□□□ 0.81
PPFIA1-202ENST00000389547 CELF2O95319 508 aaKnown RBP20.13■□□□□ 0.81
PPFIA1-202ENST00000389547 GCLMP48507 274 aa20.13■□□□□ 0.81
PPFIA1-202ENST00000389547 MYL7Q01449 175 aa20.13■□□□□ 0.81
PPFIA1-202ENST00000389547 SEMA3FQ13275 785 aa20.13■□□□□ 0.81
PPFIA1-202ENST00000389547 CAPN12Q6ZSI9 719 aa20.13■□□□□ 0.81
PPFIA1-202ENST00000389547 UPF1Q92900 1129 aaKnown RBP eCLIP20.13■□□□□ 0.81
PPFIA1-202ENST00000389547 TUFT1Q9NNX1 390 aa20.13■□□□□ 0.81
PPFIA1-202ENST00000389547 GPRC5CQ9NQ84 441 aa20.13■□□□□ 0.81
PPFIA1-202ENST00000389547 SNED1Q8TER0 1413 aa20.13■□□□□ 0.81
PPFIA1-202ENST00000389547 UBOX5O94941 541 aa20.13■□□□□ 0.81
PPFIA1-202ENST00000389547 DR1Q01658 176 aa20.13■□□□□ 0.81
PPFIA1-202ENST00000389547 HAUS6Q7Z4H7 955 aa20.13■□□□□ 0.81
PPFIA1-202ENST00000389547 PITPNM3Q9BZ71 974 aa20.13■□□□□ 0.81
PPFIA1-202ENST00000389547 KDM4CQ9H3R0 1056 aa20.13■□□□□ 0.81
PPFIA1-202ENST00000389547 ZNF302Q9NR11 478 aa20.13■□□□□ 0.81
PPFIA1-202ENST00000389547 FGFR1OP2Q9NVK5 253 aa20.13■□□□□ 0.81
PPFIA1-202ENST00000389547 PARP2Q9UGN5 583 aa20.13■□□□□ 0.81
PPFIA1-202ENST00000389547 IRF6O14896 467 aa20.12■□□□□ 0.81
PPFIA1-202ENST00000389547 CETN2P41208 172 aa20.12■□□□□ 0.81
PPFIA1-202ENST00000389547 ERFP50548 548 aa20.12■□□□□ 0.81
PPFIA1-202ENST00000389547 PDCD7Q8N8D1 485 aaKnown RBP20.12■□□□□ 0.81
PPFIA1-202ENST00000389547 GLIS3Q8NEA6 775 aa20.12■□□□□ 0.81
PPFIA1-202ENST00000389547 CLMNQ96JQ2 1002 aa20.12■□□□□ 0.81
PPFIA1-202ENST00000389547 SLC5A4Q9NY91 659 aa20.12■□□□□ 0.81
PPFIA1-202ENST00000389547 NOD1Q9Y239 953 aa20.12■□□□□ 0.81
PPFIA1-202ENST00000389547 CCL15-CCL14A0A0B4J2E2 113 aa20.12■□□□□ 0.81
PPFIA1-202ENST00000389547 SERPING1P05155 500 aa20.12■□□□□ 0.81
PPFIA1-202ENST00000389547 CD19P15391 556 aa20.12■□□□□ 0.81
PPFIA1-202ENST00000389547 SFNP31947 248 aa20.12■□□□□ 0.81
PPFIA1-202ENST00000389547 CCL15Q16663 113 aa20.12■□□□□ 0.81
PPFIA1-202ENST00000389547 UBL4BQ8N7F7 174 aa20.12■□□□□ 0.81
PPFIA1-202ENST00000389547 DNAJC7Q99615 494 aa20.12■□□□□ 0.81
PPFIA1-202ENST00000389547 TMEM206Q9H813 350 aa20.12■□□□□ 0.81
PPFIA1-202ENST00000389547 GRIN2DO15399 1336 aa20.12■□□□□ 0.81
PPFIA1-202ENST00000389547 TTI1O43156 1089 aa20.12■□□□□ 0.81
PPFIA1-202ENST00000389547 MRPS35P82673 323 aaKnown RBP20.12■□□□□ 0.81
PPFIA1-202ENST00000389547 CNTN2Q02246 1040 aa20.12■□□□□ 0.81
PPFIA1-202ENST00000389547 RINT1Q6NUQ1 792 aa20.12■□□□□ 0.81
PPFIA1-202ENST00000389547 TMEM143Q96AN5 459 aa20.12■□□□□ 0.81
PPFIA1-202ENST00000389547 P2RX7Q99572 595 aaKnown RBP20.12■□□□□ 0.81
PPFIA1-202ENST00000389547 RIT2Q99578 217 aa20.12■□□□□ 0.81
PPFIA1-202ENST00000389547 KIFC3Q9BVG8 833 aa20.12■□□□□ 0.81
PPFIA1-202ENST00000389547 USP15Q9Y4E8 981 aaPredicted RBP20.12■□□□□ 0.81
PPFIA1-202ENST00000389547 CCDC188H7C350 402 aa20.12■□□□□ 0.81
PPFIA1-202ENST00000389547 THAP12O43422 761 aa20.12■□□□□ 0.81
PPFIA1-202ENST00000389547 HUNKP57058 714 aa20.12■□□□□ 0.81
PPFIA1-202ENST00000389547 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.12■□□□□ 0.81
PPFIA1-202ENST00000389547 C4orf32Q8N8J7 132 aa20.12■□□□□ 0.81
PPFIA1-202ENST00000389547 CEP63Q96MT8 703 aa20.12■□□□□ 0.81
PPFIA1-202ENST00000389547 STOML1Q9UBI4 398 aa20.12■□□□□ 0.81
PPFIA1-202ENST00000389547 IRS2Q9Y4H2 1338 aa20.12■□□□□ 0.81
PPFIA1-202ENST00000389547 DNM1LO00429 736 aa20.11■□□□□ 0.81
PPFIA1-202ENST00000389547 BYSLQ13895 437 aaKnown RBP20.11■□□□□ 0.81
PPFIA1-202ENST00000389547 KCTD19Q17RG1 926 aaPredicted RBP20.11■□□□□ 0.81
PPFIA1-202ENST00000389547 SLC17A8Q8NDX2 589 aa20.11■□□□□ 0.81
PPFIA1-202ENST00000389547 IQCGQ9H095 443 aaKnown RBP20.11■□□□□ 0.81
PPFIA1-202ENST00000389547 FAM49AQ9H0Q0 323 aaPredicted RBP20.11■□□□□ 0.81
PPFIA1-202ENST00000389547 TYW1Q9NV66 732 aaKnown RBP20.11■□□□□ 0.81
PPFIA1-202ENST00000389547 TXNP10599 105 aaKnown RBP20.11■□□□□ 0.81
PPFIA1-202ENST00000389547 PMS2P54278 862 aa20.11■□□□□ 0.81
PPFIA1-202ENST00000389547 SNAPC2Q13487 334 aa20.11■□□□□ 0.81
PPFIA1-202ENST00000389547 UAP1Q16222 522 aaPredicted RBP20.11■□□□□ 0.81
PPFIA1-202ENST00000389547 PHLDB2Q86SQ0 1253 aa20.11■□□□□ 0.81
PPFIA1-202ENST00000389547 ZNF513Q8N8E2 541 aaPredicted RBP20.11■□□□□ 0.81
PPFIA1-202ENST00000389547 IL31RAQ8NI17 732 aa20.11■□□□□ 0.81
PPFIA1-202ENST00000389547 TRAPPC3O43617 180 aa20.11■□□□□ 0.81
PPFIA1-202ENST00000389547 PECAM1P16284 738 aaPredicted RBP20.11■□□□□ 0.81
PPFIA1-202ENST00000389547 SERPINB4P48594 390 aa20.11■□□□□ 0.81
PPFIA1-202ENST00000389547 KIAA1755Q5JYT7 1200 aa20.11■□□□□ 0.81
PPFIA1-202ENST00000389547 AGBL2Q5U5Z8 902 aa20.11■□□□□ 0.81
PPFIA1-202ENST00000389547 SYT2Q8N9I0 419 aaPredicted RBP20.11■□□□□ 0.81
PPFIA1-202ENST00000389547 OPTNQ96CV9 577 aa20.11■□□□□ 0.81
PPFIA1-202ENST00000389547 GMLQ99445 158 aa20.11■□□□□ 0.81
PPFIA1-202ENST00000389547 GRID2IPA4D2P6 1211 aa20.1■□□□□ 0.81
PPFIA1-202ENST00000389547 RCCD1A6NED2 376 aa20.1■□□□□ 0.81
PPFIA1-202ENST00000389547 TBC1D12O60347 775 aa20.1■□□□□ 0.81
PPFIA1-202ENST00000389547 KCNA3P22001 575 aa20.1■□□□□ 0.81
PPFIA1-202ENST00000389547 MXI1P50539 228 aa20.1■□□□□ 0.81
PPFIA1-202ENST00000389547 SPATA33Q96N06 139 aa20.1■□□□□ 0.81
PPFIA1-202ENST00000389547 CHCHD3Q9NX63 227 aaKnown RBP20.1■□□□□ 0.81
PPFIA1-202ENST00000389547 NOC2LQ9Y3T9 749 aaKnown RBP20.1■□□□□ 0.81
PPFIA1-202ENST00000389547 IKBKGQ9Y6K9 419 aa20.1■□□□□ 0.81
PPFIA1-202ENST00000389547 IL9RQ01113 521 aa20.1■□□□□ 0.81
PPFIA1-202ENST00000389547 QPCTQ16769 361 aa20.1■□□□□ 0.81
PPFIA1-202ENST00000389547 SIAH1Q8IUQ4 282 aa20.1■□□□□ 0.81
PPFIA1-202ENST00000389547 ELOA2Q8IYF1 753 aaPredicted RBP20.1■□□□□ 0.81
PPFIA1-202ENST00000389547 RAB3IL1Q8TBN0 382 aa20.1■□□□□ 0.81
PPFIA1-202ENST00000389547 TRIM51Q9BSJ1 452 aa20.1■□□□□ 0.81
PPFIA1-202ENST00000389547 FAM237AA0A1B0GTK4 181 aa20.1■□□□□ 0.81
PPFIA1-202ENST00000389547 MAP3K7O43318 606 aa20.1■□□□□ 0.81
PPFIA1-202ENST00000389547 RASSF9O75901 435 aa20.1■□□□□ 0.81
PPFIA1-202ENST00000389547 DSG3P32926 999 aa20.1■□□□□ 0.81
PPFIA1-202ENST00000389547 THNSL1Q8IYQ7 743 aa20.1■□□□□ 0.81
PPFIA1-202ENST00000389547 ARHGAP24Q8N264 748 aa20.1■□□□□ 0.81
PPFIA1-202ENST00000389547 RANBP17Q9H2T7 1088 aaKnown RBP20.1■□□□□ 0.81
PPFIA1-202ENST00000389547 SLC38A10Q9HBR0 1119 aa20.1■□□□□ 0.81
PPFIA1-202ENST00000389547 REXO2Q9Y3B8 237 aaKnown RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms