RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 EPN3Q9H201 632 aa18.2■□□□□ 0.5
SGCB-201ENST00000381431 KCNH7Q9NS40 1196 aa18.2■□□□□ 0.5
SGCB-201ENST00000381431 POLLQ9UGP5 575 aa18.2■□□□□ 0.5
SGCB-201ENST00000381431 CCDC195A0A1B0GUA6 201 aa18.2■□□□□ 0.5
SGCB-201ENST00000381431 CHN1P15882 459 aa18.2■□□□□ 0.5
SGCB-201ENST00000381431 SLC12A1Q13621 1099 aa18.2■□□□□ 0.5
SGCB-201ENST00000381431 TRIM65Q6PJ69 517 aa18.2■□□□□ 0.5
SGCB-201ENST00000381431 PRMT1Q99873 361 aaKnown RBP18.2■□□□□ 0.5
SGCB-201ENST00000381431 POLRMTO00411 1230 aaKnown RBP18.2■□□□□ 0.5
SGCB-201ENST00000381431 CREB3O43889 395 aa18.2■□□□□ 0.5
SGCB-201ENST00000381431 ENTPD3O75355 529 aa18.2■□□□□ 0.5
SGCB-201ENST00000381431 SKIP12755 728 aa18.2■□□□□ 0.5
SGCB-201ENST00000381431 RSPH3Q86UC2 560 aa18.2■□□□□ 0.5
SGCB-201ENST00000381431 METTL23Q86XA0 190 aa18.2■□□□□ 0.5
SGCB-201ENST00000381431 RBM15Q96T37 977 aaKnown RBP eCLIP18.2■□□□□ 0.5
SGCB-201ENST00000381431 Q9H521 79 aa18.2■□□□□ 0.5
SGCB-201ENST00000381431 DHX35Q9H5Z1 703 aaKnown RBP18.2■□□□□ 0.5
SGCB-201ENST00000381431 PARVAQ9NVD7 372 aa18.2■□□□□ 0.5
SGCB-201ENST00000381431 ZFP69BQ9UJL9 534 aa18.2■□□□□ 0.5
SGCB-201ENST00000381431 HERVK_113P62684 666 aa18.2■□□□□ 0.5
SGCB-201ENST00000381431 NR1H3Q13133 447 aa18.2■□□□□ 0.5
SGCB-201ENST00000381431 TRIM72Q6ZMU5 477 aa18.2■□□□□ 0.5
SGCB-201ENST00000381431 FBXL16Q8N461 479 aa18.2■□□□□ 0.5
SGCB-201ENST00000381431 NUDCD1Q96RS6 583 aa18.2■□□□□ 0.5
SGCB-201ENST00000381431 UVRAGQ9P2Y5 699 aa18.2■□□□□ 0.5
SGCB-201ENST00000381431 CFAP69A5D8W1 941 aa18.19■□□□□ 0.5
SGCB-201ENST00000381431 FOXN3O00409 490 aaPredicted RBP18.19■□□□□ 0.5
SGCB-201ENST00000381431 TRPA1O75762 1119 aa18.19■□□□□ 0.5
SGCB-201ENST00000381431 KRT3P12035 628 aa18.19■□□□□ 0.5
SGCB-201ENST00000381431 RFC1P35251 1148 aaPredicted RBP18.19■□□□□ 0.5
SGCB-201ENST00000381431 GRAMD1BQ3KR37 738 aa18.19■□□□□ 0.5
SGCB-201ENST00000381431 C2CD6Q53TS8 623 aa18.19■□□□□ 0.5
SGCB-201ENST00000381431 ATP6V1E2Q96A05 226 aa18.19■□□□□ 0.5
SGCB-201ENST00000381431 AGPAT3Q9NRZ7 376 aa18.19■□□□□ 0.5
SGCB-201ENST00000381431 IPO11Q9UI26 975 aaKnown RBP18.19■□□□□ 0.5
SGCB-201ENST00000381431 SALL1Q9NSC2 1324 aa18.19■□□□□ 0.5
SGCB-201ENST00000381431 VEGFAP15692 232 aaPredicted RBP18.19■□□□□ 0.5
SGCB-201ENST00000381431 SPATA33Q96N06 139 aa18.19■□□□□ 0.5
SGCB-201ENST00000381431 THAP2Q9H0W7 228 aa18.19■□□□□ 0.5
SGCB-201ENST00000381431 TOPORSQ9NS56 1045 aaPredicted RBP18.19■□□□□ 0.5
SGCB-201ENST00000381431 PHF2O75151 1096 aa18.19■□□□□ 0.5
SGCB-201ENST00000381431 TMEM253P0C7T8 217 aa18.19■□□□□ 0.5
SGCB-201ENST00000381431 VPS72Q15906 364 aa18.19■□□□□ 0.5
SGCB-201ENST00000381431 XKR3Q5GH77 459 aa18.19■□□□□ 0.5
SGCB-201ENST00000381431 TWF2Q6IBS0 349 aaKnown RBP18.19■□□□□ 0.5
SGCB-201ENST00000381431 ATP11CQ8NB49 1132 aa18.19■□□□□ 0.5
SGCB-201ENST00000381431 ERP44Q9BS26 406 aa18.19■□□□□ 0.5
SGCB-201ENST00000381431 IL17RBQ9NRM6 502 aa18.19■□□□□ 0.5
SGCB-201ENST00000381431 ZNF70Q9UC06 446 aaPredicted RBP18.19■□□□□ 0.5
SGCB-201ENST00000381431 GGPS1O95749 300 aa18.18■□□□□ 0.5
SGCB-201ENST00000381431 HSPA4LO95757 839 aa18.18■□□□□ 0.5
SGCB-201ENST00000381431 SARSP49591 514 aaKnown RBP18.18■□□□□ 0.5
SGCB-201ENST00000381431 STX1BP61266 288 aa18.18■□□□□ 0.5
SGCB-201ENST00000381431 KLHL38Q2WGJ6 581 aa18.18■□□□□ 0.5
SGCB-201ENST00000381431 NBPF9Q3BBW0 867 aa18.18■□□□□ 0.5
SGCB-201ENST00000381431 C4orf33Q8N1A6 199 aa18.18■□□□□ 0.5
SGCB-201ENST00000381431 CEP120Q8N960 986 aa18.18■□□□□ 0.5
SGCB-201ENST00000381431 RNF139Q8WU17 664 aa18.18■□□□□ 0.5
SGCB-201ENST00000381431 LRGUKQ96M69 825 aa18.18■□□□□ 0.5
SGCB-201ENST00000381431 SMYD3Q9H7B4 428 aa18.18■□□□□ 0.5
SGCB-201ENST00000381431 GPRC5CQ9NQ84 441 aa18.18■□□□□ 0.5
SGCB-201ENST00000381431 DEPDC5O75140 1603 aa18.18■□□□□ 0.5
SGCB-201ENST00000381431 CASP2P42575 452 aa18.18■□□□□ 0.5
SGCB-201ENST00000381431 EPHB1P54762 984 aa18.18■□□□□ 0.5
SGCB-201ENST00000381431 NCOA4Q13772 614 aa18.18■□□□□ 0.5
SGCB-201ENST00000381431 MAP7Q14244 749 aa18.18■□□□□ 0.5
SGCB-201ENST00000381431 SLC29A2Q14542 456 aa18.18■□□□□ 0.5
SGCB-201ENST00000381431 COG2Q14746 738 aa18.18■□□□□ 0.5
SGCB-201ENST00000381431 RPAINQ86UA6 219 aa18.18■□□□□ 0.5
SGCB-201ENST00000381431 ARL8AQ96BM9 186 aa18.18■□□□□ 0.5
SGCB-201ENST00000381431 TUBB6Q9BUF5 446 aa18.18■□□□□ 0.5
SGCB-201ENST00000381431 HAUS5O94927 633 aa18.18■□□□□ 0.5
SGCB-201ENST00000381431 EN1Q05925 392 aaPredicted RBP18.18■□□□□ 0.5
SGCB-201ENST00000381431 BZW1Q7L1Q6 419 aaKnown RBP18.18■□□□□ 0.5
SGCB-201ENST00000381431 MDM1Q8TC05 714 aa18.18■□□□□ 0.5
SGCB-201ENST00000381431 EXT2Q93063 718 aa18.18■□□□□ 0.5
SGCB-201ENST00000381431 MXRA8Q9BRK3 442 aa18.18■□□□□ 0.5
SGCB-201ENST00000381431 TEX13BQ9BXU2 312 aa18.18■□□□□ 0.5
SGCB-201ENST00000381431 USH1CQ9Y6N9 552 aa18.18■□□□□ 0.5
SGCB-201ENST00000381431 ANXA13P27216 316 aa18.18■□□□□ 0.5
SGCB-201ENST00000381431 HIF1AQ16665 826 aa18.18■□□□□ 0.5
SGCB-201ENST00000381431 P3H1Q32P28 736 aa18.18■□□□□ 0.5
SGCB-201ENST00000381431 RBBP8NLQ8NC74 664 aaPredicted RBP18.18■□□□□ 0.5
SGCB-201ENST00000381431 SPDL1Q96EA4 605 aa18.18■□□□□ 0.5
SGCB-201ENST00000381431 MKNK1Q9BUB5 465 aa18.18■□□□□ 0.5
SGCB-201ENST00000381431 H3BQF6 201 aa18.17■□□□□ 0.5
SGCB-201ENST00000381431 MYBL1P10243 752 aa18.17■□□□□ 0.5
SGCB-201ENST00000381431 PON1P27169 355 aa18.17■□□□□ 0.5
SGCB-201ENST00000381431 ARFIP2P53365 341 aa18.17■□□□□ 0.5
SGCB-201ENST00000381431 ART3Q13508 389 aa18.17■□□□□ 0.5
SGCB-201ENST00000381431 RFX8Q6ZV50 586 aa18.17■□□□□ 0.5
SGCB-201ENST00000381431 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.17■□□□□ 0.5
SGCB-201ENST00000381431 DDX27Q96GQ7 796 aaKnown RBP18.17■□□□□ 0.5
SGCB-201ENST00000381431 OSBPL8Q9BZF1 889 aa18.17■□□□□ 0.5
SGCB-201ENST00000381431 ZNRF3Q9ULT6 936 aa18.17■□□□□ 0.5
SGCB-201ENST00000381431 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.17■□□□□ 0.5
SGCB-201ENST00000381431 ADORA2BP29275 332 aa18.17■□□□□ 0.5
SGCB-201ENST00000381431 TSTA3Q13630 321 aaPredicted RBP18.17■□□□□ 0.5
SGCB-201ENST00000381431 TPCN2Q8NHX9 752 aa18.17■□□□□ 0.5
SGCB-201ENST00000381431 C18orf8Q96DM3 657 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms