RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 GJB5O95377 273 aa13.81□□□□□ -0.2
SMN1-202ENST00000380707 CCNE1P24864 410 aa13.81□□□□□ -0.2
SMN1-202ENST00000380707 PPP1R2P41236 205 aa13.81□□□□□ -0.2
SMN1-202ENST00000380707 ACOT2P49753 483 aa13.81□□□□□ -0.2
SMN1-202ENST00000380707 GATMP50440 423 aa13.81□□□□□ -0.2
SMN1-202ENST00000380707 CYP2J2P51589 502 aa13.81□□□□□ -0.2
SMN1-202ENST00000380707 AFF1P51825 1210 aaKnown RBP13.81□□□□□ -0.2
SMN1-202ENST00000380707 ZSCAN23Q3MJ62 389 aa13.81□□□□□ -0.2
SMN1-202ENST00000380707 CLLU1OSQ5K130 101 aa13.81□□□□□ -0.2
SMN1-202ENST00000380707 CRELD2Q6UXH1 353 aaPredicted RBP13.81□□□□□ -0.2
SMN1-202ENST00000380707 HERC6Q8IVU3 1022 aa13.81□□□□□ -0.2
SMN1-202ENST00000380707 C12orf56Q8IXR9 622 aa13.81□□□□□ -0.2
SMN1-202ENST00000380707 TMEM174Q8WUU8 243 aa13.81□□□□□ -0.2
SMN1-202ENST00000380707 NELFBQ8WX92 580 aa13.81□□□□□ -0.2
SMN1-202ENST00000380707 P2RX5Q93086 422 aa13.81□□□□□ -0.2
SMN1-202ENST00000380707 PGBD4Q96DM1 585 aa13.81□□□□□ -0.2
SMN1-202ENST00000380707 FAM213AQ9BRX8 229 aa13.81□□□□□ -0.2
SMN1-202ENST00000380707 CXCL16Q9H2A7 254 aa13.81□□□□□ -0.2
SMN1-202ENST00000380707 DMAC2Q9NW81 257 aa13.81□□□□□ -0.2
SMN1-202ENST00000380707 KLK14Q9P0G3 267 aa13.81□□□□□ -0.2
SMN1-202ENST00000380707 PARP2Q9UGN5 583 aa13.81□□□□□ -0.2
SMN1-202ENST00000380707 CTNND2Q9UQB3 1225 aa13.81□□□□□ -0.2
SMN1-202ENST00000380707 COLQQ9Y215 455 aaPredicted RBP13.81□□□□□ -0.2
SMN1-202ENST00000380707 TRANK1O15050 2925 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 GOLGA8IPA6NC78 632 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 ARL5CA6NH57 179 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 GOLGA8JA6NMD2 632 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 CALUO43852 315 aaPredicted RBP13.8□□□□□ -0.2
SMN1-202ENST00000380707 OFD1O75665 1012 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 NR3C1P04150 777 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 CLTAP09496 248 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 STX17P56962 302 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 TYRO3Q06418 890 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 ENOX2Q16206 610 aaKnown RBP13.8□□□□□ -0.2
SMN1-202ENST00000380707 PRPF38BQ5VTL8 546 aaKnown RBP13.8□□□□□ -0.2
SMN1-202ENST00000380707 HACE1Q8IYU2 909 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 HELQQ8TDG4 1101 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 EEF2KMTQ96G04 330 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 ZFP42Q96MM3 310 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 ACAP3Q96P50 834 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 MED15Q96RN5 788 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 CCDC94Q9BW85 323 aaPredicted RBP13.8□□□□□ -0.2
SMN1-202ENST00000380707 RSAD1Q9HA92 442 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 RC3H2Q9HBD1 1191 aaKnown RBP13.8□□□□□ -0.2
SMN1-202ENST00000380707 CPSF3Q9UKF6 684 aaKnown RBP13.8□□□□□ -0.2
SMN1-202ENST00000380707 EXTL3O43909 919 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 CXCL8P10145 99 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 NR2F2P24468 414 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 MLH1P40692 756 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 RABGGTBP53611 331 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 LRRC63Q05C16 580 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 PAK1Q13153 545 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 STX1AQ16623 288 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 NFIL3Q16649 462 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 EDRF1Q3B7T1 1238 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 SLC10A6Q3KNW5 377 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 TTI2Q6NXR4 508 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 ALKAL1Q6UXT8 129 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 CBWD2Q8IUF1 395 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 SLC9A9Q8IVB4 645 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 GPD1LQ8N335 351 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 XXYLT1Q8NBI6 393 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 RDH13Q8NBN7 331 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 GSTCDQ8NEC7 633 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 NOC3LQ8WTT2 800 aaKnown RBP13.8□□□□□ -0.2
SMN1-202ENST00000380707 ZNF689Q96CS4 500 aaPredicted RBP13.8□□□□□ -0.2
SMN1-202ENST00000380707 FBXL18Q96ME1 805 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 CASD1Q96PB1 797 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 GAD1Q99259 594 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 DUSP9Q99956 384 aaKnown RBP13.8□□□□□ -0.2
SMN1-202ENST00000380707 ZBED2Q9BTP6 218 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 GZF1Q9H116 711 aaPredicted RBP13.8□□□□□ -0.2
SMN1-202ENST00000380707 UBN1Q9NPG3 1134 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 GIT1Q9Y2X7 761 aa13.8□□□□□ -0.2
SMN1-202ENST00000380707 KIAA0391O15091 583 aaKnown RBP13.79□□□□□ -0.2
SMN1-202ENST00000380707 EXOC3O60645 756 aa13.79□□□□□ -0.2
SMN1-202ENST00000380707 LDHAP00338 332 aaKnown RBP13.79□□□□□ -0.2
SMN1-202ENST00000380707 CASP4P49662 377 aa13.79□□□□□ -0.2
SMN1-202ENST00000380707 YARSP54577 528 aaKnown RBP13.79□□□□□ -0.2
SMN1-202ENST00000380707 HTRA4P83105 476 aaPredicted RBP13.79□□□□□ -0.2
SMN1-202ENST00000380707 ADAM9Q13443 819 aa13.79□□□□□ -0.2
SMN1-202ENST00000380707 KYAT1Q16773 422 aa13.79□□□□□ -0.2
SMN1-202ENST00000380707 GLB1LQ6UWU2 654 aa13.79□□□□□ -0.2
SMN1-202ENST00000380707 C11orf57Q6ZUT1 292 aaPredicted RBP13.79□□□□□ -0.2
SMN1-202ENST00000380707 YME1L1Q96TA2 773 aa13.79□□□□□ -0.2
SMN1-202ENST00000380707 RAD9AQ99638 391 aa13.79□□□□□ -0.2
SMN1-202ENST00000380707 TSG101Q99816 390 aa13.79□□□□□ -0.2
SMN1-202ENST00000380707 FUCA2Q9BTY2 467 aa13.79□□□□□ -0.2
SMN1-202ENST00000380707 ANO10Q9NW15 660 aa13.79□□□□□ -0.2
SMN1-202ENST00000380707 MIOSQ9NXC5 875 aa13.79□□□□□ -0.2
SMN1-202ENST00000380707 RWDD2AQ9UIY3 292 aa13.79□□□□□ -0.2
SMN1-202ENST00000380707 INPP5FQ9Y2H2 1132 aa13.79□□□□□ -0.2
SMN1-202ENST00000380707 COL4A6Q14031 1691 aa13.78□□□□□ -0.2
SMN1-202ENST00000380707 TRIOBPQ9H2D6 2365 aa13.78□□□□□ -0.2
SMN1-202ENST00000380707 TTC26A0AVF1 554 aa13.78□□□□□ -0.2
SMN1-202ENST00000380707 BICDL2A1A5D9 508 aa13.78□□□□□ -0.2
SMN1-202ENST00000380707 TBKBP1A7MCY6 615 aa13.78□□□□□ -0.2
SMN1-202ENST00000380707 LACTBL1A8MY62 500 aa13.78□□□□□ -0.2
SMN1-202ENST00000380707 PTGESO14684 152 aa13.78□□□□□ -0.2
SMN1-202ENST00000380707 HOXA2O43364 376 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms