RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 SCNN1BP51168 640 aa13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 AOC3Q16853 763 aa13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 OTOP1Q7RTM1 612 aa13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 ZNF720Q7Z2F6 126 aa13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 LONP2Q86WA8 852 aa13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 ATP8B4Q8TF62 1192 aa13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 AGPAT1Q99943 283 aa13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 RAB17Q9H0T7 212 aa13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 NKX1-2Q9UD57 310 aaPredicted RBP13.34□□□□□ -0.27
PRPF40B-202ENST00000380281 LUC7L3O95232 432 aaKnown RBP13.33□□□□□ -0.28
PRPF40B-202ENST00000380281 GSTA1P08263 222 aa13.33□□□□□ -0.28
PRPF40B-202ENST00000380281 ALADP13716 330 aa13.33□□□□□ -0.28
PRPF40B-202ENST00000380281 CHRNA5P30532 468 aa13.33□□□□□ -0.28
PRPF40B-202ENST00000380281 JAM2P57087 298 aa13.33□□□□□ -0.28
PRPF40B-202ENST00000380281 MTMR3Q13615 1198 aa13.33□□□□□ -0.28
PRPF40B-202ENST00000380281 NUGGCQ68CJ6 796 aa13.33□□□□□ -0.28
PRPF40B-202ENST00000380281 PLA2G4FQ68DD2 849 aa13.33□□□□□ -0.28
PRPF40B-202ENST00000380281 EPM2AIP1Q7L775 607 aaPredicted RBP13.33□□□□□ -0.28
PRPF40B-202ENST00000380281 ARHGAP22Q7Z5H3 698 aa13.33□□□□□ -0.28
PRPF40B-202ENST00000380281 PASD1Q8IV76 773 aa13.33□□□□□ -0.28
PRPF40B-202ENST00000380281 ZNF653Q96CK0 615 aa13.33□□□□□ -0.28
PRPF40B-202ENST00000380281 CCDC17Q96LX7 622 aa13.33□□□□□ -0.28
PRPF40B-202ENST00000380281 FAM114A2Q9NRY5 505 aa13.33□□□□□ -0.28
PRPF40B-202ENST00000380281 CYP3A4P08684 503 aa13.33□□□□□ -0.28
PRPF40B-202ENST00000380281 SREBF1P36956 1147 aa13.33□□□□□ -0.28
PRPF40B-202ENST00000380281 PADI6Q6TGC4 694 aa13.33□□□□□ -0.28
PRPF40B-202ENST00000380281 C1orf186Q6ZWK4 172 aa13.33□□□□□ -0.28
PRPF40B-202ENST00000380281 GALNT15Q8N3T1 639 aa13.33□□□□□ -0.28
PRPF40B-202ENST00000380281 PRELID2Q8N945 189 aa13.33□□□□□ -0.28
PRPF40B-202ENST00000380281 AGBL1Q96MI9 1066 aa13.33□□□□□ -0.28
PRPF40B-202ENST00000380281 RPS6KC1Q96S38 1066 aa13.33□□□□□ -0.28
PRPF40B-202ENST00000380281 PCDHB18PQ96TA0 734 aa13.33□□□□□ -0.28
PRPF40B-202ENST00000380281 WDR11Q9BZH6 1224 aa13.33□□□□□ -0.28
PRPF40B-202ENST00000380281 TRIM4Q9C037 500 aa13.33□□□□□ -0.28
PRPF40B-202ENST00000380281 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.33□□□□□ -0.28
PRPF40B-202ENST00000380281 DLEC1Q9Y238 1755 aa13.33□□□□□ -0.28
PRPF40B-202ENST00000380281 GSTTP1A0A1W2PQM5 241 aa13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 LIN7AO14910 233 aaPredicted RBP13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 RAD17O75943 681 aa13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 GJB6O95452 261 aa13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 PRKCIP41743 596 aa13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 MSH2P43246 934 aa13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 GCLCP48506 637 aaPredicted RBP13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 BFSP1Q12934 665 aa13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 CRY2Q49AN0 593 aa13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 C10orf76Q5T2E6 689 aa13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 FAM102BQ5T8I3 360 aa13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 SEL1L2Q5TEA6 688 aa13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 HHATQ5VTY9 493 aa13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 FAM20AQ96MK3 541 aa13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 GORASP1Q9BQQ3 440 aa13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 SLITRK6Q9H5Y7 841 aa13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 CHCHD3Q9NX63 227 aaKnown RBP13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 STXBP5LQ9Y2K9 1186 aa13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 AFF2P51816 1311 aa13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 LAMB1P07942 1786 aa13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 ZMYM2Q9UBW7 1377 aa13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 TNRC6CQ9HCJ0 1690 aaKnown RBP13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 COL14A1Q05707 1796 aaKnown RBP13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 IPO5O00410 1097 aaKnown RBP13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 STAT2P52630 851 aa13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 AP3B2Q13367 1082 aa13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 AGBL2Q5U5Z8 902 aa13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 CYP4F22Q6NT55 531 aa13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 FAM47EQ6ZV65 393 aa13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 CBWD2Q8IUF1 395 aa13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 NUP85Q9BW27 656 aa13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 NAV1Q8NEY1 1877 aa13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 MMP10P09238 476 aa13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 POLR2MP0CAP2 368 aa13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 HARSP12081 509 aaKnown RBP13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 EIF2AK2P19525 551 aaKnown RBP13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 RFC5P40937 340 aa13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 ATP11AP98196 1134 aa13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 KYNUQ16719 465 aa13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 TMEM154Q6P9G4 183 aa13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 PIGWQ7Z7B1 504 aa13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 HSD17B14Q9BPX1 270 aa13.32□□□□□ -0.28
PRPF40B-202ENST00000380281 POLRMTO00411 1230 aaKnown RBP13.31□□□□□ -0.28
PRPF40B-202ENST00000380281 RASGRF2O14827 1237 aa13.31□□□□□ -0.28
PRPF40B-202ENST00000380281 MAPK7Q13164 816 aa13.31□□□□□ -0.28
PRPF40B-202ENST00000380281 MTHFD1LQ6UB35 978 aa13.31□□□□□ -0.28
PRPF40B-202ENST00000380281 MIER3Q7Z3K6 550 aa13.31□□□□□ -0.28
PRPF40B-202ENST00000380281 SEPT12Q8IYM1 358 aa13.31□□□□□ -0.28
PRPF40B-202ENST00000380281 UBL4BQ8N7F7 174 aa13.31□□□□□ -0.28
PRPF40B-202ENST00000380281 IL31RAQ8NI17 732 aa13.31□□□□□ -0.28
PRPF40B-202ENST00000380281 TMEM165Q9HC07 324 aa13.31□□□□□ -0.28
PRPF40B-202ENST00000380281 PCMTD2Q9NV79 361 aa13.31□□□□□ -0.28
PRPF40B-202ENST00000380281 FGFR1OP2Q9NVK5 253 aa13.31□□□□□ -0.28
PRPF40B-202ENST00000380281 DLGAP2Q9P1A6 1054 aa13.31□□□□□ -0.28
PRPF40B-202ENST00000380281 H0Y3Z8 333 aa13.31□□□□□ -0.28
PRPF40B-202ENST00000380281 KIAA0391O15091 583 aaKnown RBP13.31□□□□□ -0.28
PRPF40B-202ENST00000380281 GH1P01241 217 aa13.31□□□□□ -0.28
PRPF40B-202ENST00000380281 TMEM253P0C7T8 217 aa13.31□□□□□ -0.28
PRPF40B-202ENST00000380281 ALAS1P13196 640 aa13.31□□□□□ -0.28
PRPF40B-202ENST00000380281 VAMP7P51809 220 aa13.31□□□□□ -0.28
PRPF40B-202ENST00000380281 PTENP60484 403 aa13.31□□□□□ -0.28
PRPF40B-202ENST00000380281 KAZNQ674X7 775 aa13.31□□□□□ -0.28
PRPF40B-202ENST00000380281 TMEM179Q6ZVK1 233 aa13.31□□□□□ -0.28
PRPF40B-202ENST00000380281 NOP9Q86U38 636 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms