RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 DGAT1O75907 488 aa8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 MMEP08473 750 aa8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 COPB2P35606 906 aa8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 CYP24A1Q07973 514 aa8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 NAA35Q5VZE5 725 aa8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 LMBRD2Q68DH5 695 aaPredicted RBP8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 SEPT14Q6ZU15 432 aa8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 SV2AQ7L0J3 742 aa8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 ZNF467Q7Z7K2 595 aaPredicted RBP8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 CPNE8Q86YQ8 564 aa8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 SLC17A8Q8NDX2 589 aa8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 TMEM143Q96AN5 459 aa8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 FAM213AQ9BRX8 229 aa8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 BTBD7Q9P203 1132 aa8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 AMACRQ9UHK6 382 aa8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 COQ4Q9Y3A0 265 aa8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 SNCAIPQ9Y6H5 919 aa8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 OTOFQ9HC10 1997 aa8.59□□□□□ -1.03
PDLIM5-204ENST00000380176 DICER1Q9UPY3 1922 aaKnown RBP8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 PMM2O15305 246 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 SUPT20HL2P0C7V6 817 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 ECHS1P30084 290 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 GPC3P51654 580 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 HNRNPH2P55795 449 aaKnown RBP8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 ZNF211Q13398 564 aaPredicted RBP8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 PDAP1Q13442 181 aaKnown RBP8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 SUPT20HL1Q3ZLR7 823 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 NOL9Q5SY16 702 aaKnown RBP8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 ADAT2Q7Z6V5 191 aaKnown RBP8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 SHC3Q92529 594 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 ZNF516Q92618 1163 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 ALG3Q92685 438 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 HVCN1Q96D96 273 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 CELF4Q9BZC1 486 aaKnown RBP8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 HAPLN2Q9GZV7 340 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 C17orf75Q9HAS0 396 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 TMEM8AQ9HCN3 771 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 ARHGAP28Q9P2N2 729 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 DAAM1Q9Y4D1 1078 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 SBF1O95248 1867 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 SYNGAP1Q96PV0 1343 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 PAPPA2Q9BXP8 1791 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 FGGP02679 453 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 CAPN2P17655 700 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 MARCKSL1P49006 195 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 FMO1Q01740 532 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 NBPF20Q3BBV1 942 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 GNPTABQ3T906 1256 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 MIS18BP1Q6P0N0 1132 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 FMNL3Q8IVF7 1028 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 ANKRD35Q8N283 1001 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 GPD1LQ8N335 351 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 FBXL13Q8NEE6 735 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 MCPH1Q8NEM0 835 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 PIK3R5Q8WYR1 880 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 ARL8AQ96BM9 186 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 CDHR1Q96JP9 859 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 ZIM3Q96PE6 472 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 PHF12Q96QT6 1004 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 NEUROG2Q9H2A3 272 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 ATP6V0A4Q9HBG4 840 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 RAB20Q9NX57 234 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 CTTNBP2NLQ9P2B4 639 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 ALG6Q9Y672 507 aa8.58□□□□□ -1.04
PDLIM5-204ENST00000380176 TMEM110-MUSTN1A8MSY1 372 aa8.57□□□□□ -1.04
PDLIM5-204ENST00000380176 RTN2O75298 545 aa8.57□□□□□ -1.04
PDLIM5-204ENST00000380176 KRT14P02533 472 aa8.57□□□□□ -1.04
PDLIM5-204ENST00000380176 EDN1P05305 212 aa8.57□□□□□ -1.04
PDLIM5-204ENST00000380176 PAK2Q13177 524 aa8.57□□□□□ -1.04
PDLIM5-204ENST00000380176 EMC2Q15006 297 aa8.57□□□□□ -1.04
PDLIM5-204ENST00000380176 STXBP2Q15833 593 aa8.57□□□□□ -1.04
PDLIM5-204ENST00000380176 XKR3Q5GH77 459 aa8.57□□□□□ -1.04
PDLIM5-204ENST00000380176 GPC2Q8N158 579 aa8.57□□□□□ -1.04
PDLIM5-204ENST00000380176 ASAP3Q8TDY4 903 aa8.57□□□□□ -1.04
PDLIM5-204ENST00000380176 AFAP1L1Q8TED9 768 aa8.57□□□□□ -1.04
PDLIM5-204ENST00000380176 KRT35Q92764 455 aa8.57□□□□□ -1.04
PDLIM5-204ENST00000380176 BICD1Q96G01 975 aa8.57□□□□□ -1.04
PDLIM5-204ENST00000380176 ZBTB45Q96K62 511 aaPredicted RBP8.57□□□□□ -1.04
PDLIM5-204ENST00000380176 BTBD6Q96KE9 485 aa8.57□□□□□ -1.04
PDLIM5-204ENST00000380176 SH3GL2Q99962 352 aa8.57□□□□□ -1.04
PDLIM5-204ENST00000380176 ERVK-5Q9HDB9 667 aa8.57□□□□□ -1.04
PDLIM5-204ENST00000380176 RBM47A0AV96 593 aaKnown RBP8.57□□□□□ -1.04
PDLIM5-204ENST00000380176 BHMG1C9JSJ3 638 aaPredicted RBP8.57□□□□□ -1.04
PDLIM5-204ENST00000380176 TTI1O43156 1089 aa8.57□□□□□ -1.04
PDLIM5-204ENST00000380176 DDNO94850 711 aaPredicted RBP8.57□□□□□ -1.04
PDLIM5-204ENST00000380176 ATG7O95352 703 aa8.57□□□□□ -1.04
PDLIM5-204ENST00000380176 CYP11B1P15538 503 aa8.57□□□□□ -1.04
PDLIM5-204ENST00000380176 ACOT2P49753 483 aa8.57□□□□□ -1.04
PDLIM5-204ENST00000380176 POLGP54098 1239 aaPredicted RBP8.57□□□□□ -1.04
PDLIM5-204ENST00000380176 MFAP3P55082 362 aa8.57□□□□□ -1.04
PDLIM5-204ENST00000380176 NLRP11P59045 1033 aaKnown RBP8.57□□□□□ -1.04
PDLIM5-204ENST00000380176 GPC5P78333 572 aa8.57□□□□□ -1.04
PDLIM5-204ENST00000380176 BRDTQ58F21 947 aaPredicted RBP8.57□□□□□ -1.04
PDLIM5-204ENST00000380176 TTMPQ5BVD1 217 aa8.57□□□□□ -1.04
PDLIM5-204ENST00000380176 SCARA3Q6AZY7 606 aa8.57□□□□□ -1.04
PDLIM5-204ENST00000380176 TMC2Q8TDI7 906 aa8.57□□□□□ -1.04
PDLIM5-204ENST00000380176 RNPC3Q96LT9 517 aaKnown RBP8.57□□□□□ -1.04
PDLIM5-204ENST00000380176 TAF1DQ9H5J8 278 aaPredicted RBP8.57□□□□□ -1.04
PDLIM5-204ENST00000380176 ZNF302Q9NR11 478 aa8.57□□□□□ -1.04
PDLIM5-204ENST00000380176 MAFBQ9Y5Q3 323 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms