RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 LSAMPQ13449 338 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 PLS1Q14651 629 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 CYP4X1Q8N118 509 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 LRRC43Q8N309 656 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 RDH13Q8NBN7 331 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 SNF8Q96H20 258 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 MMTAG2Q9BU76 263 aaKnown RBP11.61□□□□□ -0.55
USP6NL-202ENST00000379237 OLFML3Q9NRN5 406 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 ARMCX1Q9P291 453 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 RPL26L1Q9UNX3 145 aaKnown RBP11.61□□□□□ -0.55
USP6NL-202ENST00000379237 SMG5Q9UPR3 1016 aaKnown RBP11.61□□□□□ -0.55
USP6NL-202ENST00000379237 STARD13Q9Y3M8 1113 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 HARSP12081 509 aaKnown RBP11.61□□□□□ -0.55
USP6NL-202ENST00000379237 LMBRD2Q68DH5 695 aaPredicted RBP11.61□□□□□ -0.55
USP6NL-202ENST00000379237 TMCO5AQ8N6Q1 288 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 GJA10Q969M2 543 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 KLF6Q99612 283 aaPredicted RBP11.61□□□□□ -0.55
USP6NL-202ENST00000379237 STK33Q9BYT3 514 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 SMCO2A6NFE2 343 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 DDAH1O94760 285 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 TAC1P20366 129 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 RASA1P20936 1047 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 RASGRF1Q13972 1273 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 ASRGL1Q7L266 308 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 CTAGE3PQ8IX95 158 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 PALM2Q8IXS6 379 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 KLHL4Q9C0H6 718 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 RANBP17Q9H2T7 1088 aaKnown RBP11.61□□□□□ -0.55
USP6NL-202ENST00000379237 CCDC134Q9H6E4 229 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 SAR1AQ9NR31 198 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 EMILIN3Q9NT22 766 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 TUBA8Q9NY65 449 aaPredicted RBP11.61□□□□□ -0.55
USP6NL-202ENST00000379237 SELENONQ9NZV5 590 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 USTQ9Y2C2 406 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 NEXMIFQ5QGS0 1516 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 A8MXQ7 604 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 LCA5LO95447 670 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 MT-ND3P03897 115 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 TSPY3P0CV98 308 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 TSPY8P0CW00 308 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 YARSP54577 528 aaKnown RBP11.61□□□□□ -0.55
USP6NL-202ENST00000379237 ALDH18A1P54886 795 aaKnown RBP11.61□□□□□ -0.55
USP6NL-202ENST00000379237 TSPY1Q01534 308 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 RRP1BQ14684 758 aaKnown RBP11.61□□□□□ -0.55
USP6NL-202ENST00000379237 INAQ16352 499 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 CENPPQ6IPU0 288 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 NT5DC3Q86UY8 548 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 DDHD1Q8NEL9 900 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 HSPBAP1Q96EW2 488 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 C7orf25Q9BPX7 421 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 NACA2Q9H009 215 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 PAIP1Q9H074 479 aaKnown RBP11.61□□□□□ -0.55
USP6NL-202ENST00000379237 UMODL1Q5DID0 1318 aa11.6□□□□□ -0.55
USP6NL-202ENST00000379237 PVALEFA0A1B0GWK0 134 aa11.6□□□□□ -0.55
USP6NL-202ENST00000379237 GSC2O15499 205 aa11.6□□□□□ -0.55
USP6NL-202ENST00000379237 XPOTO43592 962 aaKnown RBP11.6□□□□□ -0.55
USP6NL-202ENST00000379237 ECHS1P30084 290 aa11.6□□□□□ -0.55
USP6NL-202ENST00000379237 ITGA8P53708 1063 aa11.6□□□□□ -0.55
USP6NL-202ENST00000379237 PHC3Q8NDX5 983 aa11.6□□□□□ -0.55
USP6NL-202ENST00000379237 OR6Y1Q8NGX8 325 aa11.6□□□□□ -0.55
USP6NL-202ENST00000379237 CCT7Q99832 543 aa11.6□□□□□ -0.55
USP6NL-202ENST00000379237 HAUS8Q9BT25 410 aa11.6□□□□□ -0.55
USP6NL-202ENST00000379237 CHORDC1Q9UHD1 332 aaPredicted RBP11.6□□□□□ -0.55
USP6NL-202ENST00000379237 TTC7AQ9ULT0 858 aaPredicted RBP11.6□□□□□ -0.55
USP6NL-202ENST00000379237 NR2E1Q9Y466 385 aa11.6□□□□□ -0.55
USP6NL-202ENST00000379237 ALG6Q9Y672 507 aa11.6□□□□□ -0.55
USP6NL-202ENST00000379237 CHD2O14647 1828 aaKnown RBP11.6□□□□□ -0.55
USP6NL-202ENST00000379237 MLH3Q9UHC1 1453 aa11.6□□□□□ -0.55
USP6NL-202ENST00000379237 USP17L12C9JPN9 530 aa11.6□□□□□ -0.55
USP6NL-202ENST00000379237 USP17L21D6R901 530 aa11.6□□□□□ -0.55
USP6NL-202ENST00000379237 GIPC1O14908 333 aa11.6□□□□□ -0.55
USP6NL-202ENST00000379237 CYP27B1O15528 508 aa11.6□□□□□ -0.55
USP6NL-202ENST00000379237 GCNT3O95395 438 aa11.6□□□□□ -0.55
USP6NL-202ENST00000379237 TTC4O95801 387 aa11.6□□□□□ -0.55
USP6NL-202ENST00000379237 LDHAP00338 332 aaKnown RBP11.6□□□□□ -0.55
USP6NL-202ENST00000379237 OCM2P0CE71 109 aa11.6□□□□□ -0.55
USP6NL-202ENST00000379237 OCMP0CE72 109 aaPredicted RBP11.6□□□□□ -0.55
USP6NL-202ENST00000379237 ZNF24P17028 368 aa11.6□□□□□ -0.55
USP6NL-202ENST00000379237 RPL5P46777 297 aaKnown RBP11.6□□□□□ -0.55
USP6NL-202ENST00000379237 TRMT5Q32P41 509 aaKnown RBP11.6□□□□□ -0.55
USP6NL-202ENST00000379237 CERKLQ49MI3 558 aaPredicted RBP11.6□□□□□ -0.55
USP6NL-202ENST00000379237 SLC45A4Q5BKX6 768 aa11.6□□□□□ -0.55
USP6NL-202ENST00000379237 RHOT2Q8IXI1 618 aa11.6□□□□□ -0.55
USP6NL-202ENST00000379237 ENDOVQ8N8Q3 282 aaKnown RBP11.6□□□□□ -0.55
USP6NL-202ENST00000379237 PYDC1Q8WXC3 89 aa11.6□□□□□ -0.55
USP6NL-202ENST00000379237 CADM1Q9BY67 442 aaKnown RBP11.6□□□□□ -0.55
USP6NL-202ENST00000379237 STK17AQ9UEE5 414 aa11.6□□□□□ -0.55
USP6NL-202ENST00000379237 CLIC2O15247 247 aa11.6□□□□□ -0.55
USP6NL-202ENST00000379237 MAGEB3O15480 346 aa11.6□□□□□ -0.55
USP6NL-202ENST00000379237 COILP38432 576 aaPredicted RBP11.6□□□□□ -0.55
USP6NL-202ENST00000379237 PDK3Q15120 406 aa11.6□□□□□ -0.55
USP6NL-202ENST00000379237 DNAL1Q4LDG9 190 aa11.6□□□□□ -0.55
USP6NL-202ENST00000379237 AADACL2Q6P093 401 aa11.6□□□□□ -0.55
USP6NL-202ENST00000379237 NSMFQ6X4W1 530 aa11.6□□□□□ -0.55
USP6NL-202ENST00000379237 GALNT4Q8N4A0 578 aa11.6□□□□□ -0.55
USP6NL-202ENST00000379237 KIAA0895Q8NCT3 520 aa11.6□□□□□ -0.55
USP6NL-202ENST00000379237 SPATA17Q96L03 361 aa11.6□□□□□ -0.55
USP6NL-202ENST00000379237 GCNAQ96QF7 691 aa11.6□□□□□ -0.55
USP6NL-202ENST00000379237 PRPF18Q99633 342 aaKnown RBP11.6□□□□□ -0.55
USP6NL-202ENST00000379237 CCDC28BQ9BUN5 200 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms