RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 CALRP27797 417 aaKnown RBP15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 GBP1P32455 592 aa15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 NOP14P78316 857 aaKnown RBP15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 DGKDQ16760 1214 aa15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 USP50Q70EL3 339 aaPredicted RBP15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 PLEKHH3Q7Z736 793 aa15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 BBOF1Q8ND07 529 aa15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 PLCB1Q9NQ66 1216 aa15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 SEPT10Q9P0V9 454 aa15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 DBR1Q9UK59 544 aaKnown RBP15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 SNX24Q9Y343 169 aa15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 IGKV6D-41A0A0C4DH26 115 aa15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 M0QYV0 167 aa15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 NFKBIEO00221 500 aa15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 FOXN3O00409 490 aaPredicted RBP15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 NDC80O14777 642 aa15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 P4HA2O15460 535 aa15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 HOXD10P28358 340 aa15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 CYP4F22Q6NT55 531 aa15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 PDZD4Q76G19 769 aaPredicted RBP15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 AFG1LQ8WV93 481 aa15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 LACRTQ9GZZ8 138 aa15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 GOLPH3Q9H4A6 298 aa15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 PCSK1NQ9UHG2 260 aa15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 DUSP10Q9Y6W6 482 aa15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 SYNGAP1Q96PV0 1343 aa15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 RTN2O75298 545 aa15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 ALDH5A1P51649 535 aaPredicted RBP15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 TRIM72Q6ZMU5 477 aa15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 ANKRD42Q8N9B4 389 aa15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 ZNF507Q8TCN5 953 aa15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 MGARPQ8TDB4 240 aa15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 DNAJC19Q96DA6 116 aa15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 GPBP1L1Q9HC44 474 aaPredicted RBP15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 CYP39A1Q9NYL5 469 aa15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 TRAF3IP3Q9Y228 551 aa15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 LRRC10BA6NIK2 292 aa15.13■□□□□ 0.01
SHROOM1-203ENST00000378679 A8MXQ7 604 aa15.13■□□□□ 0.01
SHROOM1-203ENST00000378679 RARBP10826 455 aa15.13■□□□□ 0.01
SHROOM1-203ENST00000378679 ITIH3Q06033 890 aa15.13■□□□□ 0.01
SHROOM1-203ENST00000378679 TMEM132BQ14DG7 1078 aa15.13■□□□□ 0.01
SHROOM1-203ENST00000378679 PPP6R3Q5H9R7 873 aaPredicted RBP15.13■□□□□ 0.01
SHROOM1-203ENST00000378679 SLC35G2Q8TBE7 412 aa15.13■□□□□ 0.01
SHROOM1-203ENST00000378679 ETNPPLQ8TBG4 499 aa15.13■□□□□ 0.01
SHROOM1-203ENST00000378679 NSMCE1Q8WV22 266 aa15.13■□□□□ 0.01
SHROOM1-203ENST00000378679 POP1Q99575 1024 aaKnown RBP15.13■□□□□ 0.01
SHROOM1-203ENST00000378679 TMEM51Q9NW97 253 aa15.13■□□□□ 0.01
SHROOM1-203ENST00000378679 SNX9Q9Y5X1 595 aa15.13■□□□□ 0.01
SHROOM1-203ENST00000378679 A6NNZ2 444 aa15.13■□□□□ 0.01
SHROOM1-203ENST00000378679 MCF2LO15068 1137 aa15.13■□□□□ 0.01
SHROOM1-203ENST00000378679 ANXA13P27216 316 aa15.13■□□□□ 0.01
SHROOM1-203ENST00000378679 CYP2C19P33261 490 aa15.13■□□□□ 0.01
SHROOM1-203ENST00000378679 NAMPTP43490 491 aa15.13■□□□□ 0.01
SHROOM1-203ENST00000378679 TUBB8Q3ZCM7 444 aa15.13■□□□□ 0.01
SHROOM1-203ENST00000378679 RBBP8NLQ8NC74 664 aaPredicted RBP15.13■□□□□ 0.01
SHROOM1-203ENST00000378679 CCNYQ8ND76 341 aa15.13■□□□□ 0.01
SHROOM1-203ENST00000378679 FAM71BQ8TC56 605 aa15.13■□□□□ 0.01
SHROOM1-203ENST00000378679 CPA5Q8WXQ8 436 aa15.13■□□□□ 0.01
SHROOM1-203ENST00000378679 FMO2Q99518 471 aa15.13■□□□□ 0.01
SHROOM1-203ENST00000378679 RRAGCQ9HB90 399 aa15.13■□□□□ 0.01
SHROOM1-203ENST00000378679 PCDHB2Q9Y5E7 798 aa15.13■□□□□ 0.01
SHROOM1-203ENST00000378679 ZNF541Q9H0D2 1346 aa15.13■□□□□ 0.01
SHROOM1-203ENST00000378679 ATP9AO75110 1047 aa15.13■□□□□ 0.01
SHROOM1-203ENST00000378679 CASP5P51878 434 aa15.13■□□□□ 0.01
SHROOM1-203ENST00000378679 SGSM1Q2NKQ1 1148 aa15.13■□□□□ 0.01
SHROOM1-203ENST00000378679 KIAA1841Q6NSI8 718 aa15.13■□□□□ 0.01
SHROOM1-203ENST00000378679 RIN2Q8WYP3 895 aaPredicted RBP15.13■□□□□ 0.01
SHROOM1-203ENST00000378679 SYN2Q92777 582 aaPredicted RBP15.13■□□□□ 0.01
SHROOM1-203ENST00000378679 CLMNQ96JQ2 1002 aa15.13■□□□□ 0.01
SHROOM1-203ENST00000378679 HOMER3Q9NSC5 361 aa15.13■□□□□ 0.01
SHROOM1-203ENST00000378679 ANAPC5Q9UJX4 755 aa15.13■□□□□ 0.01
SHROOM1-203ENST00000378679 NAGPAQ9UK23 515 aa15.13■□□□□ 0.01
SHROOM1-203ENST00000378679 STRIP2Q9ULQ0 834 aa15.13■□□□□ 0.01
SHROOM1-203ENST00000378679 USP20Q9Y2K6 914 aa15.13■□□□□ 0.01
SHROOM1-203ENST00000378679 BUB1BO60566 1050 aaPredicted RBP15.12■□□□□ 0.01
SHROOM1-203ENST00000378679 WEE2P0C1S8 567 aa15.12■□□□□ 0.01
SHROOM1-203ENST00000378679 ARL4AP40617 200 aa15.12■□□□□ 0.01
SHROOM1-203ENST00000378679 SARNPP82979 210 aaKnown RBP15.12■□□□□ 0.01
SHROOM1-203ENST00000378679 E2F5Q15329 346 aa15.12■□□□□ 0.01
SHROOM1-203ENST00000378679 GAS2O43903 313 aaKnown RBP15.12■□□□□ 0.01
SHROOM1-203ENST00000378679 CSDE1O75534 798 aaKnown RBP15.12■□□□□ 0.01
SHROOM1-203ENST00000378679 ARL1P40616 181 aaPredicted RBP15.12■□□□□ 0.01
SHROOM1-203ENST00000378679 LGSNQ5TDP6 509 aa15.12■□□□□ 0.01
SHROOM1-203ENST00000378679 C1orf186Q6ZWK4 172 aa15.12■□□□□ 0.01
SHROOM1-203ENST00000378679 RAET1EQ8TD07 263 aa15.12■□□□□ 0.01
SHROOM1-203ENST00000378679 HSPH1Q92598 858 aa15.12■□□□□ 0.01
SHROOM1-203ENST00000378679 MS4A14Q96JA4 679 aa15.12■□□□□ 0.01
SHROOM1-203ENST00000378679 SYT17Q9BSW7 474 aa15.12■□□□□ 0.01
SHROOM1-203ENST00000378679 DNAJC17Q9NVM6 304 aaKnown RBP15.12■□□□□ 0.01
SHROOM1-203ENST00000378679 ARHGAP20Q9P2F6 1191 aa15.12■□□□□ 0.01
SHROOM1-203ENST00000378679 CHORDC1Q9UHD1 332 aaPredicted RBP15.12■□□□□ 0.01
SHROOM1-203ENST00000378679 MAD1L1Q9Y6D9 718 aa15.12■□□□□ 0.01
SHROOM1-203ENST00000378679 EXOC4Q96A65 974 aa15.12■□□□□ 0.01
SHROOM1-203ENST00000378679 HSD17B14Q9BPX1 270 aa15.12■□□□□ 0.01
SHROOM1-203ENST00000378679 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.12■□□□□ 0.012e-6■■■□□ 15.3
SHROOM1-203ENST00000378679 TACO1Q9BSH4 297 aaKnown RBP15.12■□□□□ 0.01
SHROOM1-203ENST00000378679 BAIAP2L1Q9UHR4 511 aa15.12■□□□□ 0.01
SHROOM1-203ENST00000378679 FRMPD4Q14CM0 1322 aa15.12■□□□□ 0.01
SHROOM1-203ENST00000378679 LRP6O75581 1613 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms