RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 MMEL1Q495T6 779 aa15.96■□□□□ 0.14
NPHP4-201ENST00000378156 LMBRD2Q68DH5 695 aaPredicted RBP15.96■□□□□ 0.14
NPHP4-201ENST00000378156 CCDC137Q6PK04 289 aaKnown RBP15.96■□□□□ 0.14
NPHP4-201ENST00000378156 NLRP14Q86W24 1093 aa15.96■□□□□ 0.14
NPHP4-201ENST00000378156 KCTD17Q8N5Z5 321 aa15.96■□□□□ 0.14
NPHP4-201ENST00000378156 RNF25Q96BH1 459 aaPredicted RBP15.96■□□□□ 0.14
NPHP4-201ENST00000378156 THOC1Q96FV9 657 aaKnown RBP15.96■□□□□ 0.14
NPHP4-201ENST00000378156 TSC22D3Q99576 134 aa15.96■□□□□ 0.14
NPHP4-201ENST00000378156 AGPAT1Q99943 283 aa15.96■□□□□ 0.14
NPHP4-201ENST00000378156 SUCLA2Q9P2R7 463 aaPredicted RBP15.96■□□□□ 0.14
NPHP4-201ENST00000378156 M0QYV0 167 aa15.95■□□□□ 0.14
NPHP4-201ENST00000378156 PLS3P13797 630 aa15.95■□□□□ 0.14
NPHP4-201ENST00000378156 CHRNA3P32297 505 aa15.95■□□□□ 0.14
NPHP4-201ENST00000378156 TRAPPC11Q7Z392 1133 aa15.95■□□□□ 0.14
NPHP4-201ENST00000378156 FGFR1OP2Q9NVK5 253 aa15.95■□□□□ 0.14
NPHP4-201ENST00000378156 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.95■□□□□ 0.146e-6■■■■■ 34.1
NPHP4-201ENST00000378156 PFASO15067 1338 aa15.95■□□□□ 0.14
NPHP4-201ENST00000378156 FMO5P49326 533 aa15.95■□□□□ 0.14
NPHP4-201ENST00000378156 PHEXP78562 749 aa15.95■□□□□ 0.14
NPHP4-201ENST00000378156 NT5DC1Q5TFE4 455 aa15.95■□□□□ 0.14
NPHP4-201ENST00000378156 SLC35G2Q8TBE7 412 aa15.95■□□□□ 0.14
NPHP4-201ENST00000378156 SMARCAD1Q9H4L7 1026 aa15.95■□□□□ 0.14
NPHP4-201ENST00000378156 SAYSD1Q9NPB0 183 aa15.95■□□□□ 0.14
NPHP4-201ENST00000378156 KCNH7Q9NS40 1196 aa15.95■□□□□ 0.14
NPHP4-201ENST00000378156 PITPNM2Q9BZ72 1349 aa15.95■□□□□ 0.14
NPHP4-201ENST00000378156 CYP26A1O43174 497 aa15.95■□□□□ 0.14
NPHP4-201ENST00000378156 XPAP23025 273 aaPredicted RBP15.95■□□□□ 0.14
NPHP4-201ENST00000378156 RPS6P62753 249 aaKnown RBP15.95■□□□□ 0.14
NPHP4-201ENST00000378156 MXD4Q14582 209 aaPredicted RBP15.95■□□□□ 0.14
NPHP4-201ENST00000378156 TBC1D1Q86TI0 1168 aaPredicted RBP15.95■□□□□ 0.14
NPHP4-201ENST00000378156 ACER1Q8TDN7 264 aa15.95■□□□□ 0.14
NPHP4-201ENST00000378156 SEMA6BQ9H3T3 888 aa15.95■□□□□ 0.14
NPHP4-201ENST00000378156 CAPN6Q9Y6Q1 641 aa15.95■□□□□ 0.14
NPHP4-201ENST00000378156 WTIPA6NIX2 430 aaPredicted RBP15.95■□□□□ 0.14
NPHP4-201ENST00000378156 MX2P20592 715 aa15.95■□□□□ 0.14
NPHP4-201ENST00000378156 CAP2P40123 477 aa15.95■□□□□ 0.14
NPHP4-201ENST00000378156 PDCD2Q16342 344 aaPredicted RBP15.95■□□□□ 0.14
NPHP4-201ENST00000378156 XRRA1Q6P2D8 792 aa15.95■□□□□ 0.14
NPHP4-201ENST00000378156 PCGF5Q86SE9 256 aa15.95■□□□□ 0.14
NPHP4-201ENST00000378156 RYBPQ8N488 228 aaPredicted RBP15.95■□□□□ 0.14
NPHP4-201ENST00000378156 C1orf54Q8WWF1 131 aa15.95■□□□□ 0.14
NPHP4-201ENST00000378156 KIF12Q96FN5 646 aa15.95■□□□□ 0.14
NPHP4-201ENST00000378156 CENPKQ9BS16 269 aa15.95■□□□□ 0.14
NPHP4-201ENST00000378156 TRIM51Q9BSJ1 452 aa15.95■□□□□ 0.14
NPHP4-201ENST00000378156 GINM1Q9NU53 330 aa15.95■□□□□ 0.14
NPHP4-201ENST00000378156 TLK1Q9UKI8 766 aa15.95■□□□□ 0.14
NPHP4-201ENST00000378156 HOXD10P28358 340 aa15.94■□□□□ 0.14
NPHP4-201ENST00000378156 TAF1CQ15572 869 aaPredicted RBP15.94■□□□□ 0.14
NPHP4-201ENST00000378156 NAB2Q15742 525 aa15.94■□□□□ 0.14
NPHP4-201ENST00000378156 ST13P4Q8IZP2 240 aaPredicted RBP15.94■□□□□ 0.14
NPHP4-201ENST00000378156 STK33Q9BYT3 514 aa15.94■□□□□ 0.14
NPHP4-201ENST00000378156 PCSK1NQ9UHG2 260 aa15.94■□□□□ 0.14
NPHP4-201ENST00000378156 TTC7AQ9ULT0 858 aaPredicted RBP15.94■□□□□ 0.14
NPHP4-201ENST00000378156 DEUP1Q05D60 604 aa15.94■□□□□ 0.14
NPHP4-201ENST00000378156 JADE1Q6IE81 842 aa15.94■□□□□ 0.14
NPHP4-201ENST00000378156 CATSPER3Q86XQ3 398 aa15.94■□□□□ 0.14
NPHP4-201ENST00000378156 SCN4BQ8IWT1 228 aa15.94■□□□□ 0.14
NPHP4-201ENST00000378156 DONSONQ9NYP3 566 aa15.94■□□□□ 0.14
NPHP4-201ENST00000378156 APEX2Q9UBZ4 518 aa15.94■□□□□ 0.14
NPHP4-201ENST00000378156 COL5A2P05997 1499 aaPredicted RBP15.94■□□□□ 0.14
NPHP4-201ENST00000378156 RAD51CO43502 376 aa15.94■□□□□ 0.14
NPHP4-201ENST00000378156 ATP5HO75947 161 aa15.94■□□□□ 0.14
NPHP4-201ENST00000378156 SLC25A27O95847 323 aa15.94■□□□□ 0.14
NPHP4-201ENST00000378156 ACOT2P49753 483 aa15.94■□□□□ 0.14
NPHP4-201ENST00000378156 RCN2Q14257 317 aa15.94■□□□□ 0.14
NPHP4-201ENST00000378156 KYAT1Q16773 422 aa15.94■□□□□ 0.14
NPHP4-201ENST00000378156 RWDD4Q6NW29 188 aaKnown RBP15.94■□□□□ 0.14
NPHP4-201ENST00000378156 TRIM59Q8IWR1 403 aa15.94■□□□□ 0.14
NPHP4-201ENST00000378156 SRRM1Q8IYB3 904 aaKnown RBP15.94■□□□□ 0.14
NPHP4-201ENST00000378156 MORC4Q8TE76 937 aa15.94■□□□□ 0.14
NPHP4-201ENST00000378156 FAM187AA6NFU0 413 aa15.94■□□□□ 0.14
NPHP4-201ENST00000378156 HERVK_113P62684 666 aa15.94■□□□□ 0.14
NPHP4-201ENST00000378156 TSPY1Q01534 308 aa15.94■□□□□ 0.14
NPHP4-201ENST00000378156 THOC5Q13769 683 aaKnown RBP15.94■□□□□ 0.14
NPHP4-201ENST00000378156 WDR72Q3MJ13 1102 aa15.94■□□□□ 0.14
NPHP4-201ENST00000378156 SRLQ86TD4 932 aa15.94■□□□□ 0.14
NPHP4-201ENST00000378156 DDX42Q86XP3 938 aaKnown RBP eCLIP15.94■□□□□ 0.14
NPHP4-201ENST00000378156 OR6J1Q8NGC5 347 aa15.94■□□□□ 0.14
NPHP4-201ENST00000378156 SKA2Q8WVK7 121 aaPredicted RBP15.94■□□□□ 0.14
NPHP4-201ENST00000378156 ANKS1AQ92625 1134 aa15.94■□□□□ 0.14
NPHP4-201ENST00000378156 SPDL1Q96EA4 605 aa15.94■□□□□ 0.14
NPHP4-201ENST00000378156 KLC2Q9H0B6 622 aa15.94■□□□□ 0.14
NPHP4-201ENST00000378156 IP6K2Q9UHH9 426 aa15.94■□□□□ 0.14
NPHP4-201ENST00000378156 TNS2Q63HR2 1409 aa15.93■□□□□ 0.14
NPHP4-201ENST00000378156 A8MXQ7 604 aa15.93■□□□□ 0.14
NPHP4-201ENST00000378156 KRT7P08729 469 aa15.93■□□□□ 0.14
NPHP4-201ENST00000378156 MYBL1P10243 752 aa15.93■□□□□ 0.14
NPHP4-201ENST00000378156 TBX2Q13207 712 aaPredicted RBP15.93■□□□□ 0.14
NPHP4-201ENST00000378156 OR2W6PQ8NHA6 318 aa15.93■□□□□ 0.14
NPHP4-201ENST00000378156 CXorf38Q8TB03 319 aa15.93■□□□□ 0.14
NPHP4-201ENST00000378156 MOV10L1Q9BXT6 1211 aaKnown RBP15.93■□□□□ 0.14
NPHP4-201ENST00000378156 IL17RBQ9NRM6 502 aa15.93■□□□□ 0.14
NPHP4-201ENST00000378156 HEY1Q9Y5J3 304 aa15.93■□□□□ 0.14
NPHP4-201ENST00000378156 A0A087X0T9 212 aa15.93■□□□□ 0.14
NPHP4-201ENST00000378156 TRIM66O15016 1216 aa15.93■□□□□ 0.14
NPHP4-201ENST00000378156 MAPK13O15264 365 aa15.93■□□□□ 0.14
NPHP4-201ENST00000378156 FAM228BP0C875 321 aa15.93■□□□□ 0.14
NPHP4-201ENST00000378156 PLA2G4FQ68DD2 849 aa15.93■□□□□ 0.14
NPHP4-201ENST00000378156 GJB7Q6PEY0 223 aa15.93■□□□□ 0.14
NPHP4-201ENST00000378156 FAM47EQ6ZV65 393 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms