RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 MKNK1Q9BUB5 465 aa23.2■■□□□ 1.3
CBWD3-202ENST00000377342 TRIM6Q9C030 488 aaPredicted RBP23.2■■□□□ 1.3
CBWD3-202ENST00000377342 IL23AQ9NPF7 189 aa23.2■■□□□ 1.3
CBWD3-202ENST00000377342 A0A0U1RQF3 1178 aa23.19■■□□□ 1.3
CBWD3-202ENST00000377342 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.19■■□□□ 1.3
CBWD3-202ENST00000377342 SMTNL1A8MU46 457 aa23.19■■□□□ 1.3
CBWD3-202ENST00000377342 BECN2A8MW95 431 aa23.19■■□□□ 1.3
CBWD3-202ENST00000377342 PFKMP08237 780 aa23.19■■□□□ 1.3
CBWD3-202ENST00000377342 STAG3L1P0CL83 205 aa23.19■■□□□ 1.3
CBWD3-202ENST00000377342 EPHB4P54760 987 aa23.19■■□□□ 1.3
CBWD3-202ENST00000377342 FPGSQ05932 587 aa23.19■■□□□ 1.3
CBWD3-202ENST00000377342 ENOX2Q16206 610 aaKnown RBP23.19■■□□□ 1.3
CBWD3-202ENST00000377342 C16orf59Q7L2K0 433 aa23.19■■□□□ 1.3
CBWD3-202ENST00000377342 APBB1IPQ7Z5R6 666 aaPredicted RBP23.19■■□□□ 1.3
CBWD3-202ENST00000377342 CNOT6LQ96LI5 555 aaKnown RBP23.19■■□□□ 1.3
CBWD3-202ENST00000377342 RNF39Q9H2S5 420 aa23.19■■□□□ 1.3
CBWD3-202ENST00000377342 MEIS3P2A8K0S8 358 aa23.19■■□□□ 1.3
CBWD3-202ENST00000377342 RAB27AP51159 221 aa23.19■■□□□ 1.3
CBWD3-202ENST00000377342 MARSP56192 900 aaKnown RBP23.19■■□□□ 1.3
CBWD3-202ENST00000377342 BRSK2Q8IWQ3 736 aa23.19■■□□□ 1.3
CBWD3-202ENST00000377342 FAM186BQ8IYM0 893 aa23.19■■□□□ 1.3
CBWD3-202ENST00000377342 RDH13Q8NBN7 331 aa23.19■■□□□ 1.3
CBWD3-202ENST00000377342 PLEKHO2Q8TD55 490 aa23.19■■□□□ 1.3
CBWD3-202ENST00000377342 SNTG2Q9NY99 539 aa23.19■■□□□ 1.3
CBWD3-202ENST00000377342 FRMD4BQ9Y2L6 1034 aa23.19■■□□□ 1.3
CBWD3-202ENST00000377342 ENPP3O14638 875 aa23.18■■□□□ 1.3
CBWD3-202ENST00000377342 MAPK13O15264 365 aa23.18■■□□□ 1.3
CBWD3-202ENST00000377342 ZNF623O75123 536 aa23.18■■□□□ 1.3
CBWD3-202ENST00000377342 LDHAP00338 332 aaKnown RBP23.18■■□□□ 1.3
CBWD3-202ENST00000377342 CXCL8P10145 99 aa23.18■■□□□ 1.3
CBWD3-202ENST00000377342 ATP1A3P13637 1013 aa23.18■■□□□ 1.3
CBWD3-202ENST00000377342 PSMC2P35998 433 aaKnown RBP23.18■■□□□ 1.3
CBWD3-202ENST00000377342 CYP24A1Q07973 514 aa23.18■■□□□ 1.3
CBWD3-202ENST00000377342 FAM43BQ6ZT52 329 aaPredicted RBP23.18■■□□□ 1.3
CBWD3-202ENST00000377342 SLC24A5Q71RS6 500 aa23.18■■□□□ 1.3
CBWD3-202ENST00000377342 MRPL10Q7Z7H8 261 aaKnown RBP23.18■■□□□ 1.3
CBWD3-202ENST00000377342 ZNF598Q86UK7 904 aaKnown RBP23.18■■□□□ 1.3
CBWD3-202ENST00000377342 ECHDC2Q86YB7 292 aa23.18■■□□□ 1.3
CBWD3-202ENST00000377342 KIAA1586Q9HCI6 787 aa23.18■■□□□ 1.3
CBWD3-202ENST00000377342 C1orf112Q9NSG2 853 aa23.18■■□□□ 1.3
CBWD3-202ENST00000377342 COL4A6Q14031 1691 aa23.18■■□□□ 1.3
CBWD3-202ENST00000377342 RECQL4O94761 1208 aa23.17■■□□□ 1.3
CBWD3-202ENST00000377342 FGFR1OPO95684 399 aaKnown RBP23.17■■□□□ 1.3
CBWD3-202ENST00000377342 CLTAP09496 248 aa23.17■■□□□ 1.3
CBWD3-202ENST00000377342 EPB41P11171 864 aaKnown RBP23.17■■□□□ 1.3
CBWD3-202ENST00000377342 PPIGQ13427 754 aaKnown RBP eCLIP23.17■■□□□ 1.3
CBWD3-202ENST00000377342 RPUSD2Q8IZ73 545 aaKnown RBP23.17■■□□□ 1.3
CBWD3-202ENST00000377342 LPPQ93052 612 aa23.17■■□□□ 1.3
CBWD3-202ENST00000377342 MFSD14AQ96MC6 490 aa23.17■■□□□ 1.3
CBWD3-202ENST00000377342 APOL6Q9BWW8 343 aa23.17■■□□□ 1.3
CBWD3-202ENST00000377342 CXCL16Q9H2A7 254 aa23.17■■□□□ 1.3
CBWD3-202ENST00000377342 RBAKQ9NYW8 714 aaPredicted RBP23.17■■□□□ 1.3
CBWD3-202ENST00000377342 ZNF233A6NK53 670 aa23.16■■□□□ 1.3
CBWD3-202ENST00000377342 AKAP5P24588 427 aa23.16■■□□□ 1.3
CBWD3-202ENST00000377342 FAM189BP81408 668 aa23.16■■□□□ 1.3
CBWD3-202ENST00000377342 CCDC94Q9BW85 323 aaPredicted RBP23.16■■□□□ 1.3
CBWD3-202ENST00000377342 TDRD15B5MCY1 1934 aaKnown RBP23.16■■□□□ 1.3
CBWD3-202ENST00000377342 FNDC1Q4ZHG4 1894 aaPredicted RBP23.16■■□□□ 1.3
CBWD3-202ENST00000377342 KCNJ18B7U540 433 aa23.16■■□□□ 1.3
CBWD3-202ENST00000377342 GNA14O95837 355 aa23.16■■□□□ 1.3
CBWD3-202ENST00000377342 IKBKEQ14164 716 aa23.16■■□□□ 1.3
CBWD3-202ENST00000377342 KCNJ12Q14500 433 aa23.16■■□□□ 1.3
CBWD3-202ENST00000377342 KYAT1Q16773 422 aa23.16■■□□□ 1.3
CBWD3-202ENST00000377342 SLC10A6Q3KNW5 377 aa23.16■■□□□ 1.3
CBWD3-202ENST00000377342 CCDC40Q4G0X9 1142 aa23.16■■□□□ 1.3
CBWD3-202ENST00000377342 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.16■■□□□ 1.3
CBWD3-202ENST00000377342 AGMOQ6ZNB7 445 aa23.16■■□□□ 1.3
CBWD3-202ENST00000377342 FRMD5Q7Z6J6 570 aa23.16■■□□□ 1.3
CBWD3-202ENST00000377342 TRIM59Q8IWR1 403 aa23.16■■□□□ 1.3
CBWD3-202ENST00000377342 CRIPAKQ8N1N5 446 aa23.16■■□□□ 1.3
CBWD3-202ENST00000377342 SNX27Q96L92 541 aa23.16■■□□□ 1.3
CBWD3-202ENST00000377342 ACAP3Q96P50 834 aa23.16■■□□□ 1.3
CBWD3-202ENST00000377342 PDE4DIPQ5VU43 2346 aa23.15■■□□□ 1.3
CBWD3-202ENST00000377342 GOLGA6L19H0YKK7 550 aa23.15■■□□□ 1.3
CBWD3-202ENST00000377342 MCCD1P59942 119 aaPredicted RBP23.15■■□□□ 1.3
CBWD3-202ENST00000377342 BFSP1Q12934 665 aa23.15■■□□□ 1.3
CBWD3-202ENST00000377342 TCP11X2Q5H9J9 407 aa23.15■■□□□ 1.3
CBWD3-202ENST00000377342 C1orf220Q5T0J3 134 aa23.15■■□□□ 1.3
CBWD3-202ENST00000377342 APTXQ7Z2E3 356 aaKnown RBP23.15■■□□□ 1.3
CBWD3-202ENST00000377342 FAM114A1Q8IWE2 563 aa23.15■■□□□ 1.3
CBWD3-202ENST00000377342 ARMCX3Q9UH62 379 aaPredicted RBP23.15■■□□□ 1.3
CBWD3-202ENST00000377342 PTPRJQ12913 1337 aa23.15■■□□□ 1.3
CBWD3-202ENST00000377342 ABHD14A-ACY1A0A1B0GW23 586 aa23.14■■□□□ 1.29
CBWD3-202ENST00000377342 TTC26A0AVF1 554 aa23.14■■□□□ 1.29
CBWD3-202ENST00000377342 IBSPP21815 317 aaPredicted RBP23.14■■□□□ 1.29
CBWD3-202ENST00000377342 EEF1GP26641 437 aaKnown RBP23.14■■□□□ 1.29
CBWD3-202ENST00000377342 DLG4P78352 724 aa23.14■■□□□ 1.29
CBWD3-202ENST00000377342 POU5F1Q01860 360 aaKnown RBP23.14■■□□□ 1.29
CBWD3-202ENST00000377342 PSMD6Q15008 389 aa23.14■■□□□ 1.29
CBWD3-202ENST00000377342 INTS8Q75QN2 995 aaKnown RBP23.14■■□□□ 1.29
CBWD3-202ENST00000377342 FAM84AQ96KN4 292 aa23.14■■□□□ 1.29
CBWD3-202ENST00000377342 RPF1Q9H9Y2 349 aaKnown RBP23.14■■□□□ 1.29
CBWD3-202ENST00000377342 PDE11AQ9HCR9 933 aa23.14■■□□□ 1.29
CBWD3-202ENST00000377342 RNF19AQ9NV58 838 aa23.14■■□□□ 1.29
CBWD3-202ENST00000377342 NR2E3Q9Y5X4 410 aa23.14■■□□□ 1.29
CBWD3-202ENST00000377342 SKIP12755 728 aa23.13■■□□□ 1.29
CBWD3-202ENST00000377342 ITGA4P13612 1032 aa23.13■■□□□ 1.29
CBWD3-202ENST00000377342 KRT31Q15323 416 aa23.13■■□□□ 1.29
CBWD3-202ENST00000377342 TMEM240Q5SV17 173 aa23.13■■□□□ 1.29
CBWD3-202ENST00000377342 ZNF365Q70YC5 407 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms