RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 ACO2Q99798 780 aaKnown RBP13.97□□□□□ -0.17
TRIM40-206ENST00000376724 PUF60Q9UHX1 559 aaKnown RBP13.97□□□□□ -0.17
TRIM40-206ENST00000376724 CDC23Q9UJX2 597 aa13.97□□□□□ -0.17
TRIM40-206ENST00000376724 NAGPAQ9UK23 515 aa13.97□□□□□ -0.17
TRIM40-206ENST00000376724 DAAM1Q9Y4D1 1078 aa13.97□□□□□ -0.17
TRIM40-206ENST00000376724 TLL2Q9Y6L7 1015 aa13.97□□□□□ -0.17
TRIM40-206ENST00000376724 SIP14410 1827 aa13.97□□□□□ -0.17
TRIM40-206ENST00000376724 DOCK3Q8IZD9 2030 aa13.97□□□□□ -0.17
TRIM40-206ENST00000376724 TMCO5BA8MYB1 307 aa13.97□□□□□ -0.17
TRIM40-206ENST00000376724 DDX3XO00571 662 aaKnown RBP eCLIP13.97□□□□□ -0.17
TRIM40-206ENST00000376724 B4GALT5O43286 388 aa13.97□□□□□ -0.17
TRIM40-206ENST00000376724 TOM1L1O75674 476 aa13.97□□□□□ -0.17
TRIM40-206ENST00000376724 CLSTN1O94985 981 aa13.97□□□□□ -0.17
TRIM40-206ENST00000376724 VTNP04004 478 aa13.97□□□□□ -0.17
TRIM40-206ENST00000376724 TNFSF9P41273 254 aa13.97□□□□□ -0.17
TRIM40-206ENST00000376724 GPC3P51654 580 aa13.97□□□□□ -0.17
TRIM40-206ENST00000376724 BIRC3Q13489 604 aa13.97□□□□□ -0.17
TRIM40-206ENST00000376724 NAB2Q15742 525 aa13.97□□□□□ -0.17
TRIM40-206ENST00000376724 ZNF710Q8N1W2 664 aa13.97□□□□□ -0.17
TRIM40-206ENST00000376724 MSL3Q8N5Y2 521 aaKnown RBP13.97□□□□□ -0.17
TRIM40-206ENST00000376724 TRIM58Q8NG06 486 aa13.97□□□□□ -0.17
TRIM40-206ENST00000376724 LNX1Q8TBB1 728 aaPredicted RBP13.97□□□□□ -0.17
TRIM40-206ENST00000376724 FAM212AQ96EL1 285 aa13.97□□□□□ -0.17
TRIM40-206ENST00000376724 MINDY3Q9H8M7 445 aa13.97□□□□□ -0.17
TRIM40-206ENST00000376724 COQ4Q9Y3A0 265 aa13.97□□□□□ -0.17
TRIM40-206ENST00000376724 PTPRJQ12913 1337 aa13.96□□□□□ -0.17
TRIM40-206ENST00000376724 TNPO2O14787 897 aaKnown RBP13.96□□□□□ -0.17
TRIM40-206ENST00000376724 MAGEB2O15479 319 aa13.96□□□□□ -0.17
TRIM40-206ENST00000376724 ASAP2O43150 1006 aa13.96□□□□□ -0.17
TRIM40-206ENST00000376724 SRGAP2O75044 1071 aa13.96□□□□□ -0.17
TRIM40-206ENST00000376724 MFAP3P55082 362 aa13.96□□□□□ -0.17
TRIM40-206ENST00000376724 IRX5P78411 483 aaPredicted RBP13.96□□□□□ -0.17
TRIM40-206ENST00000376724 PPFIA1Q13136 1202 aa13.96□□□□□ -0.17
TRIM40-206ENST00000376724 PRPF4BQ13523 1007 aaKnown RBP13.96□□□□□ -0.17
TRIM40-206ENST00000376724 BMS1Q14692 1282 aaKnown RBP13.96□□□□□ -0.17
TRIM40-206ENST00000376724 MTHFD1LQ6UB35 978 aa13.96□□□□□ -0.17
TRIM40-206ENST00000376724 TATDN2Q93075 761 aa13.96□□□□□ -0.17
TRIM40-206ENST00000376724 KREMEN1Q96MU8 473 aa13.96□□□□□ -0.17
TRIM40-206ENST00000376724 NT5C1BQ96P26 610 aa13.96□□□□□ -0.17
TRIM40-206ENST00000376724 NOX5Q96PH1 765 aa13.96□□□□□ -0.17
TRIM40-206ENST00000376724 ALS2CR12Q96Q35 445 aa13.96□□□□□ -0.17
TRIM40-206ENST00000376724 EVPLQ92817 2033 aa13.96□□□□□ -0.17
TRIM40-206ENST00000376724 A0A087WZ62 844 aa13.95□□□□□ -0.18
TRIM40-206ENST00000376724 TNFAIP3P21580 790 aa13.95□□□□□ -0.18
TRIM40-206ENST00000376724 TMOD1P28289 359 aa13.95□□□□□ -0.18
TRIM40-206ENST00000376724 PTENP60484 403 aa13.95□□□□□ -0.18
TRIM40-206ENST00000376724 OSTNP61366 133 aa13.95□□□□□ -0.18
TRIM40-206ENST00000376724 SREBF2Q12772 1141 aa13.95□□□□□ -0.18
TRIM40-206ENST00000376724 GRIK4Q16099 956 aa13.95□□□□□ -0.18
TRIM40-206ENST00000376724 TDRD10Q5VZ19 366 aaKnown RBP13.95□□□□□ -0.18
TRIM40-206ENST00000376724 OLFML2BQ68BL8 750 aa13.95□□□□□ -0.18
TRIM40-206ENST00000376724 FMNL3Q8IVF7 1028 aa13.95□□□□□ -0.18
TRIM40-206ENST00000376724 HELQQ8TDG4 1101 aa13.95□□□□□ -0.18
TRIM40-206ENST00000376724 UBXN4Q92575 508 aa13.95□□□□□ -0.18
TRIM40-206ENST00000376724 CCDC102AQ96A19 550 aa13.95□□□□□ -0.18
TRIM40-206ENST00000376724 SCLT1Q96NL6 688 aa13.95□□□□□ -0.18
TRIM40-206ENST00000376724 FDXACB1Q9BRP7 624 aaPredicted RBP13.95□□□□□ -0.18
TRIM40-206ENST00000376724 GPBP1L1Q9HC44 474 aaPredicted RBP13.95□□□□□ -0.18
TRIM40-206ENST00000376724 ACKR2O00590 384 aa13.95□□□□□ -0.18
TRIM40-206ENST00000376724 C4BPAP04003 597 aaKnown RBP13.95□□□□□ -0.18
TRIM40-206ENST00000376724 IQCF3P0C7M6 154 aa13.95□□□□□ -0.18
TRIM40-206ENST00000376724 ZNF865P0CJ78 1059 aaPredicted RBP13.95□□□□□ -0.18
TRIM40-206ENST00000376724 RGS2P41220 211 aa13.95□□□□□ -0.18
TRIM40-206ENST00000376724 PIK3CAP42336 1068 aa13.95□□□□□ -0.18
TRIM40-206ENST00000376724 AMPD2Q01433 879 aa13.95□□□□□ -0.18
TRIM40-206ENST00000376724 MBTD1Q05BQ5 628 aa13.95□□□□□ -0.18
TRIM40-206ENST00000376724 KIF22Q14807 665 aa13.95□□□□□ -0.18
TRIM40-206ENST00000376724 C10orf76Q5T2E6 689 aa13.95□□□□□ -0.18
TRIM40-206ENST00000376724 ATF7IP2Q5U623 682 aa13.95□□□□□ -0.18
TRIM40-206ENST00000376724 TLK2Q86UE8 772 aa13.95□□□□□ -0.18
TRIM40-206ENST00000376724 THNSL1Q8IYQ7 743 aa13.95□□□□□ -0.18
TRIM40-206ENST00000376724 SLC20A1Q8WUM9 679 aa13.95□□□□□ -0.18
TRIM40-206ENST00000376724 FZD8Q9H461 694 aa13.95□□□□□ -0.18
TRIM40-206ENST00000376724 IFT122Q9HBG6 1241 aa13.95□□□□□ -0.18
TRIM40-206ENST00000376724 ACP6Q9NPH0 428 aa13.95□□□□□ -0.18
TRIM40-206ENST00000376724 SETD4Q9NVD3 440 aa13.95□□□□□ -0.18
TRIM40-206ENST00000376724 SAR1BQ9Y6B6 198 aa13.95□□□□□ -0.18
TRIM40-206ENST00000376724 PCNTO95613 3336 aa13.95□□□□□ -0.18
TRIM40-206ENST00000376724 CYP26A1O43174 497 aa13.94□□□□□ -0.18
TRIM40-206ENST00000376724 TADA3O75528 432 aa13.94□□□□□ -0.18
TRIM40-206ENST00000376724 SGPL1O95470 568 aa13.94□□□□□ -0.18
TRIM40-206ENST00000376724 HLA-DRAP01903 254 aa13.94□□□□□ -0.18
TRIM40-206ENST00000376724 HOXC6P09630 235 aa13.94□□□□□ -0.18
TRIM40-206ENST00000376724 ANXA13P27216 316 aa13.94□□□□□ -0.18
TRIM40-206ENST00000376724 PHKA2P46019 1235 aa13.94□□□□□ -0.18
TRIM40-206ENST00000376724 CLDN10P78369 228 aa13.94□□□□□ -0.18
TRIM40-206ENST00000376724 ENPEPQ07075 957 aa13.94□□□□□ -0.18
TRIM40-206ENST00000376724 TUBB2AQ13885 445 aa13.94□□□□□ -0.18
TRIM40-206ENST00000376724 ZNF568Q3ZCX4 644 aa13.94□□□□□ -0.18
TRIM40-206ENST00000376724 ZACNQ401N2 412 aa13.94□□□□□ -0.18
TRIM40-206ENST00000376724 TEX35Q5T0J7 233 aa13.94□□□□□ -0.18
TRIM40-206ENST00000376724 C15orf39Q6ZRI6 1047 aa13.94□□□□□ -0.18
TRIM40-206ENST00000376724 TRAPPC11Q7Z392 1133 aa13.94□□□□□ -0.18
TRIM40-206ENST00000376724 RNF10Q8N5U6 811 aaKnown RBP13.94□□□□□ -0.18
TRIM40-206ENST00000376724 OR5B17Q8NGF7 314 aa13.94□□□□□ -0.18
TRIM40-206ENST00000376724 SLC30A5Q8TAD4 765 aa13.94□□□□□ -0.18
TRIM40-206ENST00000376724 NLRP7Q8WX94 980 aa13.94□□□□□ -0.18
TRIM40-206ENST00000376724 DHX38Q92620 1227 aaKnown RBP13.94□□□□□ -0.18
TRIM40-206ENST00000376724 USP6NLQ92738 828 aa13.94□□□□□ -0.18
TRIM40-206ENST00000376724 VTI1AQ96AJ9 217 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms