RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 EHD2Q9NZN4 543 aa13.15□□□□□ -0.3
VPS13A-204ENST00000376634 MYO1GB0I1T2 1018 aa13.15□□□□□ -0.3
VPS13A-204ENST00000376634 EIF3DO15371 548 aaKnown RBP eCLIP13.15□□□□□ -0.33e-6■■□□□ 12.2
VPS13A-204ENST00000376634 CC2D1AQ6P1N0 951 aaPredicted RBP13.15□□□□□ -0.3
VPS13A-204ENST00000376634 CDR2LQ86X02 465 aaPredicted RBP13.15□□□□□ -0.3
VPS13A-204ENST00000376634 FEM1BQ9UK73 627 aa13.15□□□□□ -0.3
VPS13A-204ENST00000376634 AP3B1O00203 1094 aa13.15□□□□□ -0.3
VPS13A-204ENST00000376634 TYK2P29597 1187 aa13.15□□□□□ -0.3
VPS13A-204ENST00000376634 ALDH18A1P54886 795 aaKnown RBP13.15□□□□□ -0.3
VPS13A-204ENST00000376634 HORMAD1Q86X24 394 aa13.15□□□□□ -0.3
VPS13A-204ENST00000376634 AGR3Q8TD06 166 aa13.15□□□□□ -0.3
VPS13A-204ENST00000376634 GOLPH3LQ9H4A5 285 aa13.15□□□□□ -0.3
VPS13A-204ENST00000376634 COPRSQ9NQ92 184 aa13.15□□□□□ -0.3
VPS13A-204ENST00000376634 RAD23BP54727 409 aa13.15□□□□□ -0.3
VPS13A-204ENST00000376634 MAP4K1Q92918 833 aa13.15□□□□□ -0.3
VPS13A-204ENST00000376634 C2orf40Q9H1Z8 148 aa13.15□□□□□ -0.3
VPS13A-204ENST00000376634 TRPC7Q9HCX4 862 aa13.15□□□□□ -0.3
VPS13A-204ENST00000376634 RALBP11234 206 aa13.15□□□□□ -0.3
VPS13A-204ENST00000376634 CDK8P49336 464 aa13.15□□□□□ -0.3
VPS13A-204ENST00000376634 PDIA2Q13087 525 aaKnown RBP13.15□□□□□ -0.3
VPS13A-204ENST00000376634 APPL2Q8NEU8 664 aa13.15□□□□□ -0.3
VPS13A-204ENST00000376634 GMNCA6NCL1 334 aa13.15□□□□□ -0.3
VPS13A-204ENST00000376634 BCAR1P56945 870 aa13.15□□□□□ -0.3
VPS13A-204ENST00000376634 ZNF394Q53GI3 561 aa13.15□□□□□ -0.3
VPS13A-204ENST00000376634 CNPY4Q8N129 248 aa13.15□□□□□ -0.3
VPS13A-204ENST00000376634 LCORLQ8N3X6 602 aa13.15□□□□□ -0.3
VPS13A-204ENST00000376634 CAMSAP1Q5T5Y3 1602 aa13.15□□□□□ -0.3
VPS13A-204ENST00000376634 PARVAQ9NVD7 372 aa13.15□□□□□ -0.3
VPS13A-204ENST00000376634 TBX22Q9Y458 520 aa13.15□□□□□ -0.3
VPS13A-204ENST00000376634 DYNLL1P63167 89 aaKnown RBP13.15□□□□□ -0.31
VPS13A-204ENST00000376634 NFX1Q12986 1120 aaKnown RBP13.15□□□□□ -0.31
VPS13A-204ENST00000376634 HIC1Q14526 733 aa13.15□□□□□ -0.31
VPS13A-204ENST00000376634 ARL8AQ96BM9 186 aa13.15□□□□□ -0.31
VPS13A-204ENST00000376634 ADCY3O60266 1144 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 GCLMP48507 274 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 CDK17Q00537 523 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 THNSL1Q8IYQ7 743 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 PPP1R2P1Q96PQ5 205 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 PCDHB6Q9Y5E3 794 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 INSRP06213 1382 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 SERPINB1P30740 379 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 AKT1P31749 480 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 ATPAF2Q8N5M1 289 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 COG1Q8WTW3 980 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 NSMCE4AQ9NXX6 385 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 SEC24DO94855 1032 aaPredicted RBP13.14□□□□□ -0.31
VPS13A-204ENST00000376634 ADORA2BP29275 332 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 FLCNQ8NFG4 579 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 SERPINB4P48594 390 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 ADCK5Q3MIX3 580 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 ERFEQ4G0M1 354 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 DHX35Q9H5Z1 703 aaKnown RBP13.14□□□□□ -0.31
VPS13A-204ENST00000376634 ZBTB5O15062 677 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 IL6STP40189 918 aaPredicted RBP13.14□□□□□ -0.31
VPS13A-204ENST00000376634 ARFIP2P53365 341 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 FBXO38Q6PIJ6 1188 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 PADI6Q6TGC4 694 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 C17orf80Q9BSJ5 609 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 MRGBPQ9NV56 204 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 PZPP20742 1482 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 CDC25AP30304 524 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 NLRP11P59045 1033 aaKnown RBP13.14□□□□□ -0.31
VPS13A-204ENST00000376634 TPI1P60174 286 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 LRRC74AQ0VAA2 488 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 P3H1Q32P28 736 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 AASDHQ4L235 1098 aaPredicted RBP13.14□□□□□ -0.31
VPS13A-204ENST00000376634 USPL1Q5W0Q7 1092 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 THAP11Q96EK4 314 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 ETNK1Q9HBU6 452 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 CDH6P55285 790 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 KCNQ4P56696 695 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 TRIP4Q15650 581 aaPredicted RBP13.14□□□□□ -0.31
VPS13A-204ENST00000376634 C6orf10Q5SRN2 563 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 FAM196AQ6ZSG2 479 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 KIRREL3Q8IZU9 778 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 LINC00301Q8NCQ3 95 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 FBXO40Q9UH90 709 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 STXBP3O00186 592 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 KRCC1Q9NPI7 259 aaPredicted RBP13.14□□□□□ -0.31
VPS13A-204ENST00000376634 NCAPD2Q15021 1401 aa13.14□□□□□ -0.31
VPS13A-204ENST00000376634 GRIK1P39086 918 aa13.13□□□□□ -0.31
VPS13A-204ENST00000376634 GID8Q9NWU2 228 aa13.13□□□□□ -0.31
VPS13A-204ENST00000376634 C16orf96A6NNT2 1141 aa13.13□□□□□ -0.31
VPS13A-204ENST00000376634 VAMP7P51809 220 aa13.13□□□□□ -0.31
VPS13A-204ENST00000376634 LVRNQ6Q4G3 990 aa13.13□□□□□ -0.31
VPS13A-204ENST00000376634 RTKN2Q8IZC4 609 aa13.13□□□□□ -0.31
VPS13A-204ENST00000376634 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.13□□□□□ -0.31
VPS13A-204ENST00000376634 FAM162AQ96A26 154 aa13.13□□□□□ -0.31
VPS13A-204ENST00000376634 FAM213AQ9BRX8 229 aa13.13□□□□□ -0.31
VPS13A-204ENST00000376634 SMARCAD1Q9H4L7 1026 aa13.13□□□□□ -0.31
VPS13A-204ENST00000376634 H2AFY2Q9P0M6 372 aaPredicted RBP13.13□□□□□ -0.31
VPS13A-204ENST00000376634 ARHGAP31Q2M1Z3 1444 aa13.13□□□□□ -0.31
VPS13A-204ENST00000376634 SRGAP2O75044 1071 aa13.13□□□□□ -0.31
VPS13A-204ENST00000376634 SFNP31947 248 aa13.13□□□□□ -0.31
VPS13A-204ENST00000376634 ARSEP51690 589 aa13.13□□□□□ -0.31
VPS13A-204ENST00000376634 PDAP1Q13442 181 aaKnown RBP13.13□□□□□ -0.31
VPS13A-204ENST00000376634 CUL3Q13618 768 aa13.13□□□□□ -0.31
VPS13A-204ENST00000376634 DNAJC7Q99615 494 aa13.13□□□□□ -0.31
VPS13A-204ENST00000376634 TAF1DQ9H5J8 278 aaPredicted RBP13.13□□□□□ -0.31
VPS13A-204ENST00000376634 GEMIN8Q9NWZ8 242 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms