RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 A8MUI8 341 aa16.3■□□□□ 0.2
MSH5-203ENST00000375750 PIK3CDO00329 1044 aa16.3■□□□□ 0.2
MSH5-203ENST00000375750 RIPK2O43353 540 aa16.3■□□□□ 0.2
MSH5-203ENST00000375750 GCLMP48507 274 aa16.3■□□□□ 0.2
MSH5-203ENST00000375750 TRIP13Q15645 432 aaPredicted RBP16.3■□□□□ 0.2
MSH5-203ENST00000375750 FAM178BQ8IXR5 827 aa16.3■□□□□ 0.2
MSH5-203ENST00000375750 KIF2BQ8N4N8 673 aa16.3■□□□□ 0.2
MSH5-203ENST00000375750 CCDC63Q8NA47 563 aa16.3■□□□□ 0.2
MSH5-203ENST00000375750 LMO3Q8TAP4 145 aa16.3■□□□□ 0.2
MSH5-203ENST00000375750 PRCCQ92733 491 aaPredicted RBP16.3■□□□□ 0.2
MSH5-203ENST00000375750 CENPTQ96BT3 561 aa16.3■□□□□ 0.2
MSH5-203ENST00000375750 PGM2Q96G03 612 aa16.3■□□□□ 0.2
MSH5-203ENST00000375750 HSD17B14Q9BPX1 270 aa16.3■□□□□ 0.2
MSH5-203ENST00000375750 KIAA1683Q9H0B3 1180 aa16.3■□□□□ 0.2
MSH5-203ENST00000375750 PARVGQ9HBI0 331 aa16.3■□□□□ 0.2
MSH5-203ENST00000375750 DDX39AO00148 427 aaKnown RBP16.29■□□□□ 0.2
MSH5-203ENST00000375750 UBOX5O94941 541 aa16.29■□□□□ 0.2
MSH5-203ENST00000375750 RARAP10276 462 aa16.29■□□□□ 0.2
MSH5-203ENST00000375750 ANXA13P27216 316 aa16.29■□□□□ 0.2
MSH5-203ENST00000375750 PPP3CAQ08209 521 aa16.29■□□□□ 0.2
MSH5-203ENST00000375750 CNGA2Q16280 664 aa16.29■□□□□ 0.2
MSH5-203ENST00000375750 EXOC3L1Q86VI1 746 aa16.29■□□□□ 0.2
MSH5-203ENST00000375750 CPXCR1Q8N123 301 aa16.29■□□□□ 0.2
MSH5-203ENST00000375750 ANKRD42Q8N9B4 389 aa16.29■□□□□ 0.2
MSH5-203ENST00000375750 GDAP1Q8TB36 358 aa16.29■□□□□ 0.2
MSH5-203ENST00000375750 C1orf54Q8WWF1 131 aa16.29■□□□□ 0.2
MSH5-203ENST00000375750 OLFML3Q9NRN5 406 aa16.29■□□□□ 0.2
MSH5-203ENST00000375750 FGFR1OP2Q9NVK5 253 aa16.29■□□□□ 0.2
MSH5-203ENST00000375750 TRIM33Q9UPN9 1127 aa16.29■□□□□ 0.2
MSH5-203ENST00000375750 FRMD4BQ9Y2L6 1034 aa16.29■□□□□ 0.2
MSH5-203ENST00000375750 EMSYQ7Z589 1322 aa16.29■□□□□ 0.2
MSH5-203ENST00000375750 RASGRF2O14827 1237 aa16.29■□□□□ 0.2
MSH5-203ENST00000375750 POLR2MP0CAP2 368 aa16.29■□□□□ 0.2
MSH5-203ENST00000375750 DHX34Q14147 1143 aaKnown RBP16.29■□□□□ 0.2
MSH5-203ENST00000375750 DCAF15Q66K64 600 aa16.29■□□□□ 0.2
MSH5-203ENST00000375750 APOBEC3FQ8IUX4 373 aaKnown RBP16.29■□□□□ 0.2
MSH5-203ENST00000375750 SYCP3Q8IZU3 236 aa16.29■□□□□ 0.2
MSH5-203ENST00000375750 FAM84AQ96KN4 292 aa16.29■□□□□ 0.2
MSH5-203ENST00000375750 FAM20AQ96MK3 541 aa16.29■□□□□ 0.2
MSH5-203ENST00000375750 ZSWIM1Q9BR11 485 aa16.29■□□□□ 0.2
MSH5-203ENST00000375750 ZNF536O15090 1300 aa16.29■□□□□ 0.2
MSH5-203ENST00000375750 IGLV3-22A0A075B6J6 115 aa16.28■□□□□ 0.2
MSH5-203ENST00000375750 DLATP10515 647 aaKnown RBP16.28■□□□□ 0.2
MSH5-203ENST00000375750 CDC25CP30307 473 aa16.28■□□□□ 0.2
MSH5-203ENST00000375750 PEX5P50542 639 aa16.28■□□□□ 0.2
MSH5-203ENST00000375750 OTOP1Q7RTM1 612 aa16.28■□□□□ 0.2
MSH5-203ENST00000375750 TRPM8Q7Z2W7 1104 aa16.28■□□□□ 0.2
MSH5-203ENST00000375750 SYT17Q9BSW7 474 aa16.28■□□□□ 0.2
MSH5-203ENST00000375750 POLR3CQ9BUI4 534 aaPredicted RBP16.28■□□□□ 0.2
MSH5-203ENST00000375750 SAMD15Q9P1V8 674 aa16.28■□□□□ 0.2
MSH5-203ENST00000375750 CCPG1Q9ULG6 757 aa16.28■□□□□ 0.2
MSH5-203ENST00000375750 SLC12A4Q9UP95 1085 aa16.28■□□□□ 0.2
MSH5-203ENST00000375750 MRPL11Q9Y3B7 192 aaKnown RBP16.28■□□□□ 0.2
MSH5-203ENST00000375750 TCP11X1B4DZS4 312 aa16.28■□□□□ 0.2
MSH5-203ENST00000375750 WDR46O15213 610 aaKnown RBP16.28■□□□□ 0.2
MSH5-203ENST00000375750 GH1P01241 217 aa16.28■□□□□ 0.2
MSH5-203ENST00000375750 GHRP10912 638 aa16.28■□□□□ 0.2
MSH5-203ENST00000375750 CHKAP35790 457 aa16.28■□□□□ 0.2
MSH5-203ENST00000375750 ZKSCAN8Q15776 578 aaPredicted RBP16.28■□□□□ 0.2
MSH5-203ENST00000375750 LRCH2Q5VUJ6 765 aa16.28■□□□□ 0.2
MSH5-203ENST00000375750 ARMC9Q7Z3E5 817 aa16.28■□□□□ 0.2
MSH5-203ENST00000375750 ANKS4BQ8N8V4 417 aa16.28■□□□□ 0.2
MSH5-203ENST00000375750 LPAR1Q92633 364 aa16.28■□□□□ 0.2
MSH5-203ENST00000375750 NAP1L3Q99457 506 aaPredicted RBP16.28■□□□□ 0.2
MSH5-203ENST00000375750 FAM118BQ9BPY3 351 aa16.28■□□□□ 0.2
MSH5-203ENST00000375750 RASAL2Q9UJF2 1139 aa16.28■□□□□ 0.2
MSH5-203ENST00000375750 PNMA3Q9UL41 463 aa16.28■□□□□ 0.2
MSH5-203ENST00000375750 TBX3O15119 743 aa16.27■□□□□ 0.2
MSH5-203ENST00000375750 BFSP1Q12934 665 aa16.27■□□□□ 0.2
MSH5-203ENST00000375750 KIF22Q14807 665 aa16.27■□□□□ 0.2
MSH5-203ENST00000375750 DAB2IPQ5VWQ8 1189 aa16.27■□□□□ 0.2
MSH5-203ENST00000375750 MOXD1Q6UVY6 613 aa16.27■□□□□ 0.2
MSH5-203ENST00000375750 EP400NLQ6ZTU2 488 aa16.27■□□□□ 0.2
MSH5-203ENST00000375750 HS2ST1Q7LGA3 356 aa16.27■□□□□ 0.2
MSH5-203ENST00000375750 SCYL3Q8IZE3 742 aa16.27■□□□□ 0.2
MSH5-203ENST00000375750 PLEKHO2Q8TD55 490 aa16.27■□□□□ 0.2
MSH5-203ENST00000375750 ATG4AQ8WYN0 398 aa16.27■□□□□ 0.2
MSH5-203ENST00000375750 THOC1Q96FV9 657 aaKnown RBP16.27■□□□□ 0.2
MSH5-203ENST00000375750 RAVER2Q9HCJ3 691 aaKnown RBP16.27■□□□□ 0.2
MSH5-203ENST00000375750 DMAC2Q9NW81 257 aa16.27■□□□□ 0.2
MSH5-203ENST00000375750 RNF181Q9P0P0 153 aa16.27■□□□□ 0.2
MSH5-203ENST00000375750 ZHX2Q9Y6X8 837 aa16.27■□□□□ 0.2
MSH5-203ENST00000375750 PFASO15067 1338 aa16.27■□□□□ 0.2
MSH5-203ENST00000375750 ASAP2O43150 1006 aa16.27■□□□□ 0.2
MSH5-203ENST00000375750 CHRNB2P17787 502 aa16.27■□□□□ 0.2
MSH5-203ENST00000375750 PTPRAP18433 802 aa16.27■□□□□ 0.2
MSH5-203ENST00000375750 CTNNA2P26232 953 aa16.27■□□□□ 0.2
MSH5-203ENST00000375750 COILP38432 576 aaPredicted RBP16.27■□□□□ 0.2
MSH5-203ENST00000375750 VPS41P49754 854 aa16.27■□□□□ 0.2
MSH5-203ENST00000375750 C6orf118Q5T5N4 469 aa16.27■□□□□ 0.2
MSH5-203ENST00000375750 NOP9Q86U38 636 aaKnown RBP16.27■□□□□ 0.2
MSH5-203ENST00000375750 RPAP3Q9H6T3 665 aaPredicted RBP16.27■□□□□ 0.2
MSH5-203ENST00000375750 HOMER2Q9NSB8 354 aa16.27■□□□□ 0.2
MSH5-203ENST00000375750 ZNF112Q9UJU3 913 aa16.27■□□□□ 0.2
MSH5-203ENST00000375750 GOLGA8IPA6NC78 632 aa16.26■□□□□ 0.19
MSH5-203ENST00000375750 GOLGA8JA6NMD2 632 aa16.26■□□□□ 0.19
MSH5-203ENST00000375750 CLDN3O15551 220 aa16.26■□□□□ 0.19
MSH5-203ENST00000375750 ICAM1P05362 532 aa16.26■□□□□ 0.19
MSH5-203ENST00000375750 YBX3P16989 372 aaKnown RBP eCLIP16.26■□□□□ 0.19
MSH5-203ENST00000375750 GAP43P17677 238 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms