RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 MAFBQ9Y5Q3 323 aaPredicted RBP12.02□□□□□ -0.49
HLA-DQA1-202ENST00000374949 SPTBN4Q9H254 2564 aa12.02□□□□□ -0.49
HLA-DQA1-202ENST00000374949 FRMD3A2A2Y4 597 aa12.01□□□□□ -0.49
HLA-DQA1-202ENST00000374949 GPR32O75388 356 aa12.01□□□□□ -0.49
HLA-DQA1-202ENST00000374949 STBD1O95210 358 aa12.01□□□□□ -0.49
HLA-DQA1-202ENST00000374949 GAP43P17677 238 aa12.01□□□□□ -0.49
HLA-DQA1-202ENST00000374949 AVPR2P30518 371 aa12.01□□□□□ -0.49
HLA-DQA1-202ENST00000374949 PRCPP42785 496 aa12.01□□□□□ -0.49
HLA-DQA1-202ENST00000374949 RARRES1P49788 294 aa12.01□□□□□ -0.49
HLA-DQA1-202ENST00000374949 PLCB3Q01970 1234 aa12.01□□□□□ -0.49
HLA-DQA1-202ENST00000374949 EHHADHQ08426 723 aa12.01□□□□□ -0.49
HLA-DQA1-202ENST00000374949 RAD51AP2Q09MP3 1159 aa12.01□□□□□ -0.49
HLA-DQA1-202ENST00000374949 STK4Q13043 487 aa12.01□□□□□ -0.49
HLA-DQA1-202ENST00000374949 XKR9Q5GH70 373 aa12.01□□□□□ -0.49
HLA-DQA1-202ENST00000374949 XKR3Q5GH77 459 aa12.01□□□□□ -0.49
HLA-DQA1-202ENST00000374949 PADI6Q6TGC4 694 aa12.01□□□□□ -0.49
HLA-DQA1-202ENST00000374949 KCNT2Q6UVM3 1135 aa12.01□□□□□ -0.49
HLA-DQA1-202ENST00000374949 TMEM184AQ6ZMB5 413 aa12.01□□□□□ -0.49
HLA-DQA1-202ENST00000374949 METTL13Q8N6R0 699 aa12.01□□□□□ -0.49
HLA-DQA1-202ENST00000374949 RNF169Q8NCN4 708 aa12.01□□□□□ -0.49
HLA-DQA1-202ENST00000374949 DHTKD1Q96HY7 919 aaPredicted RBP12.01□□□□□ -0.49
HLA-DQA1-202ENST00000374949 ZNF668Q96K58 619 aaPredicted RBP12.01□□□□□ -0.49
HLA-DQA1-202ENST00000374949 ZNF558Q96NG5 402 aa12.01□□□□□ -0.49
HLA-DQA1-202ENST00000374949 REEP2Q9BRK0 252 aa12.01□□□□□ -0.49
HLA-DQA1-202ENST00000374949 TIPINQ9BVW5 301 aa12.01□□□□□ -0.49
HLA-DQA1-202ENST00000374949 TMEM117Q9H0C3 514 aa12.01□□□□□ -0.49
HLA-DQA1-202ENST00000374949 SMOC2Q9H3U7 446 aa12.01□□□□□ -0.49
HLA-DQA1-202ENST00000374949 ZHX3Q9H4I2 956 aa12.01□□□□□ -0.49
HLA-DQA1-202ENST00000374949 SLC39A2Q9NP94 309 aa12.01□□□□□ -0.49
HLA-DQA1-202ENST00000374949 RNF216Q9NWF9 866 aaPredicted RBP12.01□□□□□ -0.49
HLA-DQA1-202ENST00000374949 RWDD2AQ9UIY3 292 aa12.01□□□□□ -0.49
HLA-DQA1-202ENST00000374949 COL4A3BPQ9Y5P4 624 aa12.01□□□□□ -0.49
HLA-DQA1-202ENST00000374949 H0Y858 1186 aa12□□□□□ -0.49
HLA-DQA1-202ENST00000374949 PSMA7O14818 248 aa12□□□□□ -0.49
HLA-DQA1-202ENST00000374949 ZNF862O60290 1169 aa12□□□□□ -0.49
HLA-DQA1-202ENST00000374949 TBCAO75347 108 aaKnown RBP12□□□□□ -0.49
HLA-DQA1-202ENST00000374949 FAM13AO94988 1023 aa12□□□□□ -0.49
HLA-DQA1-202ENST00000374949 WEE2P0C1S8 567 aa12□□□□□ -0.49
HLA-DQA1-202ENST00000374949 GUCY2CP25092 1073 aa12□□□□□ -0.49
HLA-DQA1-202ENST00000374949 PPM1AP35813 382 aa12□□□□□ -0.49
HLA-DQA1-202ENST00000374949 FAM189BP81408 668 aa12□□□□□ -0.49
HLA-DQA1-202ENST00000374949 NCAPHQ15003 741 aa12□□□□□ -0.49
HLA-DQA1-202ENST00000374949 CLLU1OSQ5K130 101 aa12□□□□□ -0.49
HLA-DQA1-202ENST00000374949 FAM26FQ5R3K3 315 aa12□□□□□ -0.49
HLA-DQA1-202ENST00000374949 SPATA1Q5VX52 437 aa12□□□□□ -0.49
HLA-DQA1-202ENST00000374949 KLHL10Q6JEL2 608 aa12□□□□□ -0.49
HLA-DQA1-202ENST00000374949 ABI1Q8IZP0 508 aa12□□□□□ -0.49
HLA-DQA1-202ENST00000374949 KREMEN2Q8NCW0 462 aa12□□□□□ -0.49
HLA-DQA1-202ENST00000374949 NELFBQ8WX92 580 aa12□□□□□ -0.49
HLA-DQA1-202ENST00000374949 BBXQ8WY36 941 aaPredicted RBP12□□□□□ -0.49
HLA-DQA1-202ENST00000374949 ATOH1Q92858 354 aaPredicted RBP12□□□□□ -0.49
HLA-DQA1-202ENST00000374949 CASD1Q96PB1 797 aa12□□□□□ -0.49
HLA-DQA1-202ENST00000374949 POMKQ9H5K3 350 aa12□□□□□ -0.49
HLA-DQA1-202ENST00000374949 ELAC1Q9H777 363 aaKnown RBP12□□□□□ -0.49
HLA-DQA1-202ENST00000374949 PUF60Q9UHX1 559 aaKnown RBP12□□□□□ -0.49
HLA-DQA1-202ENST00000374949 ODF2LQ9ULJ1 636 aa12□□□□□ -0.49
HLA-DQA1-202ENST00000374949 MAPK8IP1Q9UQF2 711 aa12□□□□□ -0.49
HLA-DQA1-202ENST00000374949 AKT3Q9Y243 479 aa12□□□□□ -0.49
HLA-DQA1-202ENST00000374949 DENND4AQ7Z401 1863 aa12□□□□□ -0.49
HLA-DQA1-202ENST00000374949 MYO10Q9HD67 2058 aa11.99□□□□□ -0.49
HLA-DQA1-202ENST00000374949 RIF1Q5UIP0 2472 aaKnown RBP11.99□□□□□ -0.49
HLA-DQA1-202ENST00000374949 C2CD4DB7Z1M9 353 aa11.99□□□□□ -0.49
HLA-DQA1-202ENST00000374949 HOXA2O43364 376 aa11.99□□□□□ -0.49
HLA-DQA1-202ENST00000374949 KIF20AO95235 890 aa11.99□□□□□ -0.49
HLA-DQA1-202ENST00000374949 OATP04181 439 aa11.99□□□□□ -0.49
HLA-DQA1-202ENST00000374949 CA8P35219 290 aa11.99□□□□□ -0.49
HLA-DQA1-202ENST00000374949 STX17P56962 302 aa11.99□□□□□ -0.49
HLA-DQA1-202ENST00000374949 PLCB2Q00722 1185 aa11.99□□□□□ -0.49
HLA-DQA1-202ENST00000374949 PRKCEQ02156 737 aa11.99□□□□□ -0.49
HLA-DQA1-202ENST00000374949 CACNB1Q02641 598 aaPredicted RBP11.99□□□□□ -0.49
HLA-DQA1-202ENST00000374949 PAK1Q13153 545 aa11.99□□□□□ -0.49
HLA-DQA1-202ENST00000374949 MTMR3Q13615 1198 aa11.99□□□□□ -0.49
HLA-DQA1-202ENST00000374949 TPD52L1Q16890 204 aaPredicted RBP11.99□□□□□ -0.49
HLA-DQA1-202ENST00000374949 ANO5Q75V66 913 aa11.99□□□□□ -0.49
HLA-DQA1-202ENST00000374949 TMC7Q7Z402 723 aa11.99□□□□□ -0.49
HLA-DQA1-202ENST00000374949 ECHDC2Q86YB7 292 aa11.99□□□□□ -0.49
HLA-DQA1-202ENST00000374949 GUF1Q8N442 669 aaKnown RBP11.99□□□□□ -0.49
HLA-DQA1-202ENST00000374949 LRRC71Q8N4P6 559 aa11.99□□□□□ -0.49
HLA-DQA1-202ENST00000374949 MYCT1Q8N699 235 aa11.99□□□□□ -0.49
HLA-DQA1-202ENST00000374949 CASP10Q92851 521 aa11.99□□□□□ -0.49
HLA-DQA1-202ENST00000374949 HPS3Q969F9 1004 aa11.99□□□□□ -0.49
HLA-DQA1-202ENST00000374949 CEP170P1Q96L14 293 aa11.99□□□□□ -0.49
HLA-DQA1-202ENST00000374949 MAP7D2Q96T17 732 aa11.99□□□□□ -0.49
HLA-DQA1-202ENST00000374949 NIFKQ9BYG3 293 aaKnown RBP11.99□□□□□ -0.49
HLA-DQA1-202ENST00000374949 NGRNQ9NPE2 291 aaKnown RBP11.99□□□□□ -0.49
HLA-DQA1-202ENST00000374949 CTNND2Q9UQB3 1225 aa11.99□□□□□ -0.49
HLA-DQA1-202ENST00000374949 HCFC2Q9Y5Z7 792 aa11.99□□□□□ -0.49
HLA-DQA1-202ENST00000374949 CFAP54Q96N23 3096 aa11.99□□□□□ -0.49
HLA-DQA1-202ENST00000374949 FAM186AA6NE01 2351 aa11.98□□□□□ -0.49
HLA-DQA1-202ENST00000374949 BICDL2A1A5D9 508 aa11.98□□□□□ -0.49
HLA-DQA1-202ENST00000374949 C2orf71A6NGG8 1288 aa11.98□□□□□ -0.49
HLA-DQA1-202ENST00000374949 SFI1A8K8P3 1242 aa11.98□□□□□ -0.49
HLA-DQA1-202ENST00000374949 CLASP2O75122 1294 aaKnown RBP11.98□□□□□ -0.49
HLA-DQA1-202ENST00000374949 HIP1RO75146 1068 aa11.98□□□□□ -0.49
HLA-DQA1-202ENST00000374949 HOXB8P17481 243 aaPredicted RBP11.98□□□□□ -0.49
HLA-DQA1-202ENST00000374949 FGFR4P22455 802 aa11.98□□□□□ -0.49
HLA-DQA1-202ENST00000374949 CCNE1P24864 410 aa11.98□□□□□ -0.49
HLA-DQA1-202ENST00000374949 ZNF131P52739 623 aa11.98□□□□□ -0.49
HLA-DQA1-202ENST00000374949 NPEPPSP55786 919 aa11.98□□□□□ -0.49
HLA-DQA1-202ENST00000374949 NLRP11P59045 1033 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms