RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 PNPLA4P41247 253 aa11.74□□□□□ -0.53
PHACTR4-202ENST00000373839 CDH6P55285 790 aa11.74□□□□□ -0.53
PHACTR4-202ENST00000373839 P3H1Q32P28 736 aa11.74□□□□□ -0.53
PHACTR4-202ENST00000373839 FMR1NBQ8N0W7 255 aaPredicted RBP11.74□□□□□ -0.53
PHACTR4-202ENST00000373839 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.74□□□□□ -0.53
PHACTR4-202ENST00000373839 RMDN1Q96DB5 314 aa11.74□□□□□ -0.53
PHACTR4-202ENST00000373839 PCSK1NQ9UHG2 260 aa11.74□□□□□ -0.53
PHACTR4-202ENST00000373839 RPS6KA5O75582 802 aa11.74□□□□□ -0.53
PHACTR4-202ENST00000373839 ATP1A3P13637 1013 aa11.74□□□□□ -0.53
PHACTR4-202ENST00000373839 ACTR2P61160 394 aa11.74□□□□□ -0.53
PHACTR4-202ENST00000373839 AP1B1Q10567 949 aa11.74□□□□□ -0.53
PHACTR4-202ENST00000373839 LAMC2Q13753 1193 aa11.74□□□□□ -0.53
PHACTR4-202ENST00000373839 LBRQ14739 615 aaKnown RBP11.74□□□□□ -0.53
PHACTR4-202ENST00000373839 OR6P1Q8NGX9 317 aa11.74□□□□□ -0.53
PHACTR4-202ENST00000373839 RNF25Q96BH1 459 aaPredicted RBP11.74□□□□□ -0.53
PHACTR4-202ENST00000373839 SNF8Q96H20 258 aa11.74□□□□□ -0.53
PHACTR4-202ENST00000373839 CPVLQ9H3G5 476 aa11.74□□□□□ -0.53
PHACTR4-202ENST00000373839 PPCSQ9HAB8 311 aa11.74□□□□□ -0.53
PHACTR4-202ENST00000373839 IQGAP3Q86VI3 1631 aa11.74□□□□□ -0.53
PHACTR4-202ENST00000373839 FAM95CA0A1B0GW59 222 aa11.74□□□□□ -0.53
PHACTR4-202ENST00000373839 RTN2O75298 545 aa11.74□□□□□ -0.53
PHACTR4-202ENST00000373839 STAG3L1P0CL83 205 aa11.74□□□□□ -0.53
PHACTR4-202ENST00000373839 ITGA4P13612 1032 aa11.74□□□□□ -0.53
PHACTR4-202ENST00000373839 NME3Q13232 169 aa11.74□□□□□ -0.53
PHACTR4-202ENST00000373839 CASP8Q14790 479 aa11.74□□□□□ -0.53
PHACTR4-202ENST00000373839 NUGGCQ68CJ6 796 aa11.74□□□□□ -0.53
PHACTR4-202ENST00000373839 TAS2R42Q7RTR8 314 aa11.74□□□□□ -0.53
PHACTR4-202ENST00000373839 HOMEZQ8IX15 550 aa11.74□□□□□ -0.53
PHACTR4-202ENST00000373839 ARHGAP18Q8N392 663 aa11.74□□□□□ -0.53
PHACTR4-202ENST00000373839 PPHLN1Q8NEY8 458 aaKnown RBP11.74□□□□□ -0.53
PHACTR4-202ENST00000373839 OXER1Q8TDS5 423 aa11.74□□□□□ -0.53
PHACTR4-202ENST00000373839 TEKT4Q8WW24 435 aa11.74□□□□□ -0.53
PHACTR4-202ENST00000373839 HEMGNQ9BXL5 484 aa11.74□□□□□ -0.53
PHACTR4-202ENST00000373839 ERAP1Q9NZ08 941 aa11.74□□□□□ -0.53
PHACTR4-202ENST00000373839 SPATA31A1Q5TZJ5 1347 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 DNAJC6O75061 913 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 WDR72Q3MJ13 1102 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 SLC26A7Q8TE54 656 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 POLR3CQ9BUI4 534 aaPredicted RBP11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 LAMC1P11047 1609 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 C3orf70A6NLC5 250 aaPredicted RBP11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 KCNQ2O43526 872 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 CHRNA5P30532 468 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 MAPRE1Q15691 268 aaKnown RBP11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 RNF180Q86T96 592 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 TSPAN17Q96FV3 270 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 BTBD6Q96KE9 485 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 MRPL46Q9H2W6 279 aaKnown RBP11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 NDFIP2Q9NV92 336 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 CHCHD3Q9NX63 227 aaKnown RBP11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 AGAP1Q9UPQ3 857 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 CCL15-CCL14A0A0B4J2E2 113 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 TRIM49BA6NDI0 452 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 P4HA2O15460 535 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 EFCAB14O75071 495 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 KRT14P02533 472 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 HIST1H2AGP0C0S8 130 aaPredicted RBP11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 HIST1H2ADP20671 130 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 FCGRTP55899 365 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 CCL15Q16663 113 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 C16orf86Q6ZW13 317 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 TBC1D1Q86TI0 1168 aaPredicted RBP11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 ELOA2Q8IYF1 753 aaPredicted RBP11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 HIST1H2AHQ96KK5 128 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 HIST1H2AJQ99878 128 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 H2AFJQ9BTM1 129 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 SIK2Q9H0K1 926 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 SUDS3Q9H7L9 328 aaPredicted RBP11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 EML4Q9HC35 981 aaKnown RBP11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 GGA3Q9NZ52 723 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 STX18Q9P2W9 335 aaKnown RBP11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 PTPRUQ92729 1446 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 E2F6O75461 281 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 CAMTA2O94983 1202 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 THEMIS2Q5TEJ8 643 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 TRIM59Q8IWR1 403 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 AGPAT1Q99943 283 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 PPARGC1AQ9UBK2 798 aaKnown RBP11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 CD163L1Q9NR16 1453 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 NBPF26B4DH59 902 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 HOXA2O43364 376 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 ZMYND10O75800 440 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 EEF1B2P24534 225 aaKnown RBP11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 FBXW4P57775 412 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 EIF2B5Q13144 721 aaKnown RBP11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 CAPRIN1Q14444 709 aaKnown RBP11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 DCAF4L1Q3SXM0 396 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 NBPF10Q6P3W6 841 aaKnown RBP11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 PDXDC1Q6P996 788 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 PID1Q7Z2X4 250 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 RASSF3Q86WH2 238 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 NBPF15Q8N660 670 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 OR9Q1Q8NGQ5 310 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 ANKEF1Q9NU02 776 aa11.73□□□□□ -0.53
PHACTR4-202ENST00000373839 CFAP99D6REC4 459 aa11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 PIK3R2O00459 728 aa11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 SPAG7O75391 227 aa11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 DGKDQ16760 1214 aa11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 EDRF1Q3B7T1 1238 aa11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 ANGEL2Q5VTE6 544 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms