RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 CHST12Q9NRB3 414 aa13.84□□□□□ -0.19
HDAC8-204ENST00000373560 STK39Q9UEW8 545 aa13.84□□□□□ -0.19
HDAC8-204ENST00000373560 SSX2IPQ9Y2D8 614 aa13.84□□□□□ -0.19
HDAC8-204ENST00000373560 NEUROG3Q9Y4Z2 214 aa13.84□□□□□ -0.19
HDAC8-204ENST00000373560 PCDHB2Q9Y5E7 798 aa13.84□□□□□ -0.19
HDAC8-204ENST00000373560 PIAS3Q9Y6X2 628 aa13.84□□□□□ -0.19
HDAC8-204ENST00000373560 KIF26AQ9ULI4 1882 aaPredicted RBP13.83□□□□□ -0.2
HDAC8-204ENST00000373560 SPDYE3A6NKU9 549 aa13.83□□□□□ -0.2
HDAC8-204ENST00000373560 ZNF623O75123 536 aa13.83□□□□□ -0.2
HDAC8-204ENST00000373560 CCNE1P24864 410 aa13.83□□□□□ -0.2
HDAC8-204ENST00000373560 SOX9P48436 509 aa13.83□□□□□ -0.2
HDAC8-204ENST00000373560 DSC1Q08554 894 aa13.83□□□□□ -0.2
HDAC8-204ENST00000373560 RTP2Q5QGT7 225 aa13.83□□□□□ -0.2
HDAC8-204ENST00000373560 PPM1LQ5SGD2 360 aa13.83□□□□□ -0.2
HDAC8-204ENST00000373560 C6orf132Q5T0Z8 1188 aa13.83□□□□□ -0.2
HDAC8-204ENST00000373560 UBXN11Q5T124 520 aa13.83□□□□□ -0.2
HDAC8-204ENST00000373560 DMRTA1Q5VZB9 504 aa13.83□□□□□ -0.2
HDAC8-204ENST00000373560 PKN3Q6P5Z2 889 aa13.83□□□□□ -0.2
HDAC8-204ENST00000373560 DEFB124Q8NES8 71 aa13.83□□□□□ -0.2
HDAC8-204ENST00000373560 RSPH1Q8WYR4 309 aa13.83□□□□□ -0.2
HDAC8-204ENST00000373560 SPZ1Q9BXG8 430 aa13.83□□□□□ -0.2
HDAC8-204ENST00000373560 KRT23Q9C075 422 aa13.83□□□□□ -0.2
HDAC8-204ENST00000373560 FNIP2Q9P278 1114 aa13.83□□□□□ -0.2
HDAC8-204ENST00000373560 MSRB2Q9Y3D2 182 aa13.83□□□□□ -0.2
HDAC8-204ENST00000373560 NUP205Q92621 2012 aa13.82□□□□□ -0.2
HDAC8-204ENST00000373560 LNP1A1A4G5 178 aa13.82□□□□□ -0.2
HDAC8-204ENST00000373560 MAN2B1O00754 1011 aa13.82□□□□□ -0.2
HDAC8-204ENST00000373560 MAGEB2O15479 319 aa13.82□□□□□ -0.2
HDAC8-204ENST00000373560 C1QL1O75973 258 aa13.82□□□□□ -0.2
HDAC8-204ENST00000373560 HNRNPA1P09651 372 aaKnown RBP eCLIP13.82□□□□□ -0.2
HDAC8-204ENST00000373560 NT5C2P49902 561 aa13.82□□□□□ -0.2
HDAC8-204ENST00000373560 UGCGQ16739 394 aa13.82□□□□□ -0.2
HDAC8-204ENST00000373560 TSR1Q2NL82 804 aaKnown RBP13.82□□□□□ -0.2
HDAC8-204ENST00000373560 PABPC1LQ4VXU2 614 aaKnown RBP13.82□□□□□ -0.2
HDAC8-204ENST00000373560 CEP55Q53EZ4 464 aa13.82□□□□□ -0.2
HDAC8-204ENST00000373560 MIS18BP1Q6P0N0 1132 aa13.82□□□□□ -0.2
HDAC8-204ENST00000373560 FUT10Q6P4F1 479 aa13.82□□□□□ -0.2
HDAC8-204ENST00000373560 MAP4K3Q8IVH8 894 aa13.82□□□□□ -0.2
HDAC8-204ENST00000373560 KSR1Q8IVT5 923 aa13.82□□□□□ -0.2
HDAC8-204ENST00000373560 SLC7A14Q8TBB6 771 aa13.82□□□□□ -0.2
HDAC8-204ENST00000373560 GAB3Q8WWW8 586 aa13.82□□□□□ -0.2
HDAC8-204ENST00000373560 RRP36Q96EU6 259 aaKnown RBP13.82□□□□□ -0.2
HDAC8-204ENST00000373560 LOXL4Q96JB6 756 aa13.82□□□□□ -0.2
HDAC8-204ENST00000373560 CLSTN3Q9BQT9 956 aa13.82□□□□□ -0.2
HDAC8-204ENST00000373560 BRD9Q9H8M2 597 aa13.82□□□□□ -0.2
HDAC8-204ENST00000373560 ZNF334Q9HCZ1 680 aaPredicted RBP13.82□□□□□ -0.2
HDAC8-204ENST00000373560 ANKFY1Q9P2R3 1169 aa13.82□□□□□ -0.2
HDAC8-204ENST00000373560 GABBR1Q9UBS5 961 aa13.82□□□□□ -0.2
HDAC8-204ENST00000373560 TAF6LQ9Y6J9 622 aa13.82□□□□□ -0.2
HDAC8-204ENST00000373560 UNC79Q9P2D8 2635 aa13.82□□□□□ -0.2
HDAC8-204ENST00000373560 TMEM150BA6NC51 233 aa13.81□□□□□ -0.2
HDAC8-204ENST00000373560 FAM86B1E9PN63 330 aa13.81□□□□□ -0.2
HDAC8-204ENST00000373560 MEIS1O00470 390 aa13.81□□□□□ -0.2
HDAC8-204ENST00000373560 EXTL3O43909 919 aa13.81□□□□□ -0.2
HDAC8-204ENST00000373560 RPP40O75818 363 aaKnown RBP13.81□□□□□ -0.2
HDAC8-204ENST00000373560 FAM86B2P0C5J1 330 aa13.81□□□□□ -0.2
HDAC8-204ENST00000373560 SMYD5Q6GMV2 418 aa13.81□□□□□ -0.2
HDAC8-204ENST00000373560 TXNDC11Q6PKC3 985 aa13.81□□□□□ -0.2
HDAC8-204ENST00000373560 VITQ6UXI7 678 aa13.81□□□□□ -0.2
HDAC8-204ENST00000373560 MRPL10Q7Z7H8 261 aaKnown RBP13.81□□□□□ -0.2
HDAC8-204ENST00000373560 SRBD1Q8N5C6 995 aaKnown RBP13.81□□□□□ -0.2
HDAC8-204ENST00000373560 ELSPBP1Q96BH3 223 aa13.81□□□□□ -0.2
HDAC8-204ENST00000373560 CRELD1Q96HD1 420 aa13.81□□□□□ -0.2
HDAC8-204ENST00000373560 SH2D3AQ9BRG2 576 aa13.81□□□□□ -0.2
HDAC8-204ENST00000373560 GCOM2Q9BZD3 368 aaPredicted RBP13.81□□□□□ -0.2
HDAC8-204ENST00000373560 VPS45Q9NRW7 570 aa13.81□□□□□ -0.2
HDAC8-204ENST00000373560 POLR3BQ9NW08 1133 aaPredicted RBP13.81□□□□□ -0.2
HDAC8-204ENST00000373560 C1RP00736 705 aa13.8□□□□□ -0.2
HDAC8-204ENST00000373560 SKIP12755 728 aa13.8□□□□□ -0.2
HDAC8-204ENST00000373560 SFPQP23246 707 aaKnown RBP eCLIP13.8□□□□□ -0.2
HDAC8-204ENST00000373560 TMOD1P28289 359 aa13.8□□□□□ -0.2
HDAC8-204ENST00000373560 GDI1P31150 447 aa13.8□□□□□ -0.2
HDAC8-204ENST00000373560 MLH1P40692 756 aa13.8□□□□□ -0.2
HDAC8-204ENST00000373560 RAB27AP51159 221 aa13.8□□□□□ -0.2
HDAC8-204ENST00000373560 SCNN1GP51170 649 aa13.8□□□□□ -0.2
HDAC8-204ENST00000373560 LIN9Q5TKA1 542 aa13.8□□□□□ -0.2
HDAC8-204ENST00000373560 LARP1BQ659C4 914 aaKnown RBP13.8□□□□□ -0.2
HDAC8-204ENST00000373560 CACNA2D4Q7Z3S7 1137 aa13.8□□□□□ -0.2
HDAC8-204ENST00000373560 SMG8Q8ND04 991 aaKnown RBP13.8□□□□□ -0.2
HDAC8-204ENST00000373560 PGBD4Q96DM1 585 aa13.8□□□□□ -0.2
HDAC8-204ENST00000373560 TCEAL4Q96EI5 215 aa13.8□□□□□ -0.2
HDAC8-204ENST00000373560 ZFP42Q96MM3 310 aa13.8□□□□□ -0.2
HDAC8-204ENST00000373560 IL25Q9H293 177 aa13.8□□□□□ -0.2
HDAC8-204ENST00000373560 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.8□□□□□ -0.2
HDAC8-204ENST00000373560 DACH1Q9UI36 760 aa13.8□□□□□ -0.2
HDAC8-204ENST00000373560 MRPS23Q9Y3D9 190 aaKnown RBP13.8□□□□□ -0.2
HDAC8-204ENST00000373560 ASCC3Q8N3C0 2202 aaKnown RBP13.8□□□□□ -0.2
HDAC8-204ENST00000373560 IGLV3-22A0A075B6J6 115 aa13.79□□□□□ -0.2
HDAC8-204ENST00000373560 SPAARA0A1B0GVQ0 90 aa13.79□□□□□ -0.2
HDAC8-204ENST00000373560 ARNTLO00327 626 aa13.79□□□□□ -0.2
HDAC8-204ENST00000373560 CDX4O14627 284 aaPredicted RBP13.79□□□□□ -0.2
HDAC8-204ENST00000373560 IFIT3O14879 490 aaKnown RBP13.79□□□□□ -0.2
HDAC8-204ENST00000373560 OATP04181 439 aa13.79□□□□□ -0.2
HDAC8-204ENST00000373560 MS4A1P11836 297 aa13.79□□□□□ -0.2
HDAC8-204ENST00000373560 CEACAM1P13688 526 aa13.79□□□□□ -0.2
HDAC8-204ENST00000373560 HOXA9P31269 272 aa13.79□□□□□ -0.2
HDAC8-204ENST00000373560 PDE1AP54750 535 aa13.79□□□□□ -0.2
HDAC8-204ENST00000373560 PRKCEQ02156 737 aa13.79□□□□□ -0.2
HDAC8-204ENST00000373560 FAM78AQ5JUQ0 283 aa13.79□□□□□ -0.2
HDAC8-204ENST00000373560 CATSPER4Q7RTX7 472 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms