RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 NDE1Q9NXR1 346 aa25.32■■□□□ 1.64
RAPGEF1-203ENST00000372195 MYBL1P10243 752 aa25.32■■□□□ 1.64
RAPGEF1-203ENST00000372195 DPYDQ12882 1025 aa25.32■■□□□ 1.64
RAPGEF1-203ENST00000372195 RNF219Q5W0B1 726 aaPredicted RBP25.32■■□□□ 1.64
RAPGEF1-203ENST00000372195 UNC45AQ9H3U1 944 aa25.32■■□□□ 1.64
RAPGEF1-203ENST00000372195 TRIM66O15016 1216 aa25.32■■□□□ 1.64
RAPGEF1-203ENST00000372195 FXR1P51114 621 aaKnown RBP eCLIP25.32■■□□□ 1.648e-6■■■□□ 16.6
RAPGEF1-203ENST00000372195 ATP11CQ8NB49 1132 aa25.32■■□□□ 1.64
RAPGEF1-203ENST00000372195 ZNF473Q8WTR7 871 aaKnown RBP25.32■■□□□ 1.64
RAPGEF1-203ENST00000372195 MARCOQ9UEW3 520 aaPredicted RBP25.32■■□□□ 1.64
RAPGEF1-203ENST00000372195 KRT7P08729 469 aa25.31■■□□□ 1.64
RAPGEF1-203ENST00000372195 PYGBP11216 843 aa25.31■■□□□ 1.64
RAPGEF1-203ENST00000372195 SLC10A5Q5PT55 438 aa25.31■■□□□ 1.64
RAPGEF1-203ENST00000372195 PGBD4Q96DM1 585 aa25.31■■□□□ 1.64
RAPGEF1-203ENST00000372195 STOML1Q9UBI4 398 aa25.31■■□□□ 1.64
RAPGEF1-203ENST00000372195 RTN2O75298 545 aa25.31■■□□□ 1.64
RAPGEF1-203ENST00000372195 LRRC31Q6UY01 552 aa25.31■■□□□ 1.64
RAPGEF1-203ENST00000372195 PID1Q7Z2X4 250 aa25.31■■□□□ 1.64
RAPGEF1-203ENST00000372195 FRMD5Q7Z6J6 570 aa25.31■■□□□ 1.64
RAPGEF1-203ENST00000372195 FAM167AQ96KS9 214 aa25.31■■□□□ 1.64
RAPGEF1-203ENST00000372195 ARHGEF37A1IGU5 675 aa25.31■■□□□ 1.64
RAPGEF1-203ENST00000372195 EFHC2Q5JST6 749 aa25.31■■□□□ 1.64
RAPGEF1-203ENST00000372195 C4orf33Q8N1A6 199 aa25.31■■□□□ 1.64
RAPGEF1-203ENST00000372195 USP33Q8TEY7 942 aa25.31■■□□□ 1.64
RAPGEF1-203ENST00000372195 TMEM143Q96AN5 459 aa25.31■■□□□ 1.64
RAPGEF1-203ENST00000372195 RPAP3Q9H6T3 665 aaPredicted RBP25.31■■□□□ 1.64
RAPGEF1-203ENST00000372195 COG4Q9H9E3 785 aa25.31■■□□□ 1.64
RAPGEF1-203ENST00000372195 NARFQ9UHQ1 456 aa25.31■■□□□ 1.64
RAPGEF1-203ENST00000372195 AURKCQ9UQB9 309 aa25.31■■□□□ 1.64
RAPGEF1-203ENST00000372195 SPON2Q9BUD6 331 aa25.3■■□□□ 1.64
RAPGEF1-203ENST00000372195 TMEM117Q9H0C3 514 aa25.3■■□□□ 1.64
RAPGEF1-203ENST00000372195 TRABDQ9H4I3 376 aa25.3■■□□□ 1.64
RAPGEF1-203ENST00000372195 SFMBT1Q9UHJ3 866 aa25.3■■□□□ 1.64
RAPGEF1-203ENST00000372195 A0A1W2PQC6 194 aa25.3■■□□□ 1.64
RAPGEF1-203ENST00000372195 HIF1AQ16665 826 aa25.3■■□□□ 1.64
RAPGEF1-203ENST00000372195 SCAF8Q9UPN6 1271 aaKnown RBP25.3■■□□□ 1.64
RAPGEF1-203ENST00000372195 GIMAP8Q8ND71 665 aaPredicted RBP25.3■■□□□ 1.64
RAPGEF1-203ENST00000372195 GCOM2Q9BZD3 368 aaPredicted RBP25.3■■□□□ 1.64
RAPGEF1-203ENST00000372195 IL17RAQ96F46 866 aa25.3■■□□□ 1.64
RAPGEF1-203ENST00000372195 OTUD5Q96G74 571 aa25.3■■□□□ 1.64
RAPGEF1-203ENST00000372195 SULT1E1P49888 294 aa25.3■■□□□ 1.64
RAPGEF1-203ENST00000372195 PRAMEP78395 509 aa25.3■■□□□ 1.64
RAPGEF1-203ENST00000372195 COBLL1Q53SF7 1204 aa25.3■■□□□ 1.64
RAPGEF1-203ENST00000372195 HSPBP1Q9NZL4 362 aa25.3■■□□□ 1.64
RAPGEF1-203ENST00000372195 LONP2Q86WA8 852 aa25.29■■□□□ 1.64
RAPGEF1-203ENST00000372195 RBM12Q9NTZ6 932 aaKnown RBP25.29■■□□□ 1.64
RAPGEF1-203ENST00000372195 VCPP55072 806 aaKnown RBP25.29■■□□□ 1.64
RAPGEF1-203ENST00000372195 OCA2Q04671 838 aa25.29■■□□□ 1.64
RAPGEF1-203ENST00000372195 CYTH1Q15438 398 aa25.29■■□□□ 1.64
RAPGEF1-203ENST00000372195 PHF20Q9BVI0 1012 aa25.29■■□□□ 1.64
RAPGEF1-203ENST00000372195 PRKAG2Q9UGJ0 569 aa25.29■■□□□ 1.64
RAPGEF1-203ENST00000372195 KCNQ2O43526 872 aa25.29■■□□□ 1.64
RAPGEF1-203ENST00000372195 NBPF9Q3BBW0 867 aa25.29■■□□□ 1.64
RAPGEF1-203ENST00000372195 SPATA21Q7Z572 469 aa25.29■■□□□ 1.64
RAPGEF1-203ENST00000372195 REEP2Q9BRK0 252 aa25.29■■□□□ 1.64
RAPGEF1-203ENST00000372195 CASS4Q9NQ75 786 aa25.29■■□□□ 1.64
RAPGEF1-203ENST00000372195 MDH1P40925 334 aaKnown RBP25.29■■□□□ 1.64
RAPGEF1-203ENST00000372195 AARSP49588 968 aaKnown RBP eCLIP25.29■■□□□ 1.64
RAPGEF1-203ENST00000372195 ALX1Q15699 326 aa25.29■■□□□ 1.64
RAPGEF1-203ENST00000372195 ZC2HC1CQ53FD0 456 aaPredicted RBP25.29■■□□□ 1.64
RAPGEF1-203ENST00000372195 GOLPH3Q9H4A6 298 aa25.29■■□□□ 1.64
RAPGEF1-203ENST00000372195 LOC102724159A0A0B4J2E5 919 aa25.29■■□□□ 1.64
RAPGEF1-203ENST00000372195 SFNP31947 248 aa25.29■■□□□ 1.64
RAPGEF1-203ENST00000372195 PWP2Q15269 919 aaKnown RBP25.29■■□□□ 1.64
RAPGEF1-203ENST00000372195 CDKL3Q8IVW4 592 aaPredicted RBP25.29■■□□□ 1.64
RAPGEF1-203ENST00000372195 EIF2AQ9BY44 585 aaKnown RBP25.29■■□□□ 1.64
RAPGEF1-203ENST00000372195 COPB2P35606 906 aa25.28■■□□□ 1.64
RAPGEF1-203ENST00000372195 FLOT2Q14254 428 aa25.28■■□□□ 1.64
RAPGEF1-203ENST00000372195 SNX5Q9Y5X3 404 aa25.28■■□□□ 1.64
RAPGEF1-203ENST00000372195 CDHR2Q9BYE9 1310 aa25.28■■□□□ 1.64
RAPGEF1-203ENST00000372195 A0A1B0GTH6 734 aa25.28■■□□□ 1.64
RAPGEF1-203ENST00000372195 POLRMTO00411 1230 aaKnown RBP25.28■■□□□ 1.64
RAPGEF1-203ENST00000372195 DHX34Q14147 1143 aaKnown RBP25.28■■□□□ 1.64
RAPGEF1-203ENST00000372195 USP49Q70CQ1 688 aa25.28■■□□□ 1.64
RAPGEF1-203ENST00000372195 LDHDQ86WU2 507 aa25.28■■□□□ 1.64
RAPGEF1-203ENST00000372195 RNF149Q8NC42 400 aa25.28■■□□□ 1.64
RAPGEF1-203ENST00000372195 ZBED2Q9BTP6 218 aa25.28■■□□□ 1.64
RAPGEF1-203ENST00000372195 CELF4Q9BZC1 486 aaKnown RBP25.28■■□□□ 1.64
RAPGEF1-203ENST00000372195 TARSL2A2RTX5 802 aaKnown RBP25.28■■□□□ 1.64
RAPGEF1-203ENST00000372195 PGM1P36871 562 aa25.28■■□□□ 1.64
RAPGEF1-203ENST00000372195 MCEEQ96PE7 176 aa25.28■■□□□ 1.64
RAPGEF1-203ENST00000372195 GRAP2O75791 330 aa25.27■■□□□ 1.64
RAPGEF1-203ENST00000372195 BRINP3Q76B58 766 aa25.27■■□□□ 1.64
RAPGEF1-203ENST00000372195 TRIM9Q9C026 710 aa25.27■■□□□ 1.64
RAPGEF1-203ENST00000372195 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.27■■□□□ 1.64
RAPGEF1-203ENST00000372195 GALCP54803 685 aa25.27■■□□□ 1.64
RAPGEF1-203ENST00000372195 GJB7Q6PEY0 223 aa25.27■■□□□ 1.64
RAPGEF1-203ENST00000372195 SGMS1Q86VZ5 419 aa25.27■■□□□ 1.64
RAPGEF1-203ENST00000372195 EPN3Q9H201 632 aa25.27■■□□□ 1.64
RAPGEF1-203ENST00000372195 PNMA3Q9UL41 463 aa25.27■■□□□ 1.64
RAPGEF1-203ENST00000372195 TAF6LQ9Y6J9 622 aa25.27■■□□□ 1.64
RAPGEF1-203ENST00000372195 MAP3K4Q9Y6R4 1608 aa25.27■■□□□ 1.64
RAPGEF1-203ENST00000372195 RAD9BQ6WBX8 426 aa25.27■■□□□ 1.64
RAPGEF1-203ENST00000372195 ISCA1Q9BUE6 129 aa25.27■■□□□ 1.64
RAPGEF1-203ENST00000372195 SUPT3HO75486 399 aa25.27■■□□□ 1.64
RAPGEF1-203ENST00000372195 EYA4O95677 639 aa25.27■■□□□ 1.64
RAPGEF1-203ENST00000372195 DACH2Q96NX9 599 aa25.27■■□□□ 1.64
RAPGEF1-203ENST00000372195 FHOD1Q9Y613 1164 aa25.27■■□□□ 1.64
RAPGEF1-203ENST00000372195 TRPM1Q7Z4N2 1603 aa25.27■■□□□ 1.64
RAPGEF1-203ENST00000372195 NCAPD2Q15021 1401 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms