RNA–Protein interactions for RNA: ENST00000372108.9

GTF3C5-204, Transcript of general transcription factor IIIC subunit 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C5, Length 2,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-204ENST00000372108 KIF22Q14807 665 aa16.85■□□□□ 0.29
GTF3C5-204ENST00000372108 FMNL3Q8IVF7 1028 aa16.85■□□□□ 0.29
GTF3C5-204ENST00000372108 TXLNBQ8N3L3 684 aa16.85■□□□□ 0.29
GTF3C5-204ENST00000372108 VTI1AQ96AJ9 217 aa16.85■□□□□ 0.29
GTF3C5-204ENST00000372108 LENG1Q96BZ8 264 aaPredicted RBP16.85■□□□□ 0.29
GTF3C5-204ENST00000372108 KREMEN1Q96MU8 473 aa16.85■□□□□ 0.29
GTF3C5-204ENST00000372108 FNBP1Q96RU3 617 aa16.85■□□□□ 0.29
GTF3C5-204ENST00000372108 TCHPQ9BT92 498 aa16.85■□□□□ 0.29
GTF3C5-204ENST00000372108 CARD6Q9BX69 1037 aa16.85■□□□□ 0.29
GTF3C5-204ENST00000372108 PACSIN1Q9BY11 444 aa16.85■□□□□ 0.29
GTF3C5-204ENST00000372108 NFKBIZQ9BYH8 718 aa16.85■□□□□ 0.29
GTF3C5-204ENST00000372108 IFT122Q9HBG6 1241 aa16.85■□□□□ 0.29
GTF3C5-204ENST00000372108 LUC7LQ9NQ29 371 aaKnown RBP16.85■□□□□ 0.29
GTF3C5-204ENST00000372108 INO80B-WBP1J3KQ70 363 aa16.84■□□□□ 0.29
GTF3C5-204ENST00000372108 TNPO2O14787 897 aaKnown RBP16.84■□□□□ 0.29
GTF3C5-204ENST00000372108 B4GALT5O43286 388 aa16.84■□□□□ 0.29
GTF3C5-204ENST00000372108 MOCS3O95396 460 aa16.84■□□□□ 0.29
GTF3C5-204ENST00000372108 C4BPAP04003 597 aaKnown RBP16.84■□□□□ 0.29
GTF3C5-204ENST00000372108 POU5F1BQ06416 359 aa16.84■□□□□ 0.29
GTF3C5-204ENST00000372108 MCL1Q07820 350 aa16.84■□□□□ 0.29
GTF3C5-204ENST00000372108 PPFIA1Q13136 1202 aa16.84■□□□□ 0.29
GTF3C5-204ENST00000372108 NAB2Q15742 525 aa16.84■□□□□ 0.29
GTF3C5-204ENST00000372108 GRIK4Q16099 956 aa16.84■□□□□ 0.29
GTF3C5-204ENST00000372108 TSHZ1Q6ZSZ6 1077 aa16.84■□□□□ 0.29
GTF3C5-204ENST00000372108 SLC30A5Q8TAD4 765 aa16.84■□□□□ 0.29
GTF3C5-204ENST00000372108 HELQQ8TDG4 1101 aa16.84■□□□□ 0.29
GTF3C5-204ENST00000372108 SOCS4Q8WXH5 440 aa16.84■□□□□ 0.29
GTF3C5-204ENST00000372108 APBA2Q99767 749 aa16.84■□□□□ 0.29
GTF3C5-204ENST00000372108 INO80BQ9C086 356 aaPredicted RBP16.84■□□□□ 0.29
GTF3C5-204ENST00000372108 PTPRHQ9HD43 1115 aa16.84■□□□□ 0.29
GTF3C5-204ENST00000372108 PRDM4Q9UKN5 801 aa16.84■□□□□ 0.29
GTF3C5-204ENST00000372108 CAPN6Q9Y6Q1 641 aa16.84■□□□□ 0.29
GTF3C5-204ENST00000372108 CNTNAP2Q9UHC6 1331 aa16.84■□□□□ 0.29
GTF3C5-204ENST00000372108 CA12O43570 354 aa16.84■□□□□ 0.29
GTF3C5-204ENST00000372108 CCDC172P0C7W6 258 aa16.84■□□□□ 0.29
GTF3C5-204ENST00000372108 TNNI1P19237 187 aa16.84■□□□□ 0.29
GTF3C5-204ENST00000372108 PROZP22891 400 aa16.84■□□□□ 0.29
GTF3C5-204ENST00000372108 TNFSF9P41273 254 aa16.84■□□□□ 0.29
GTF3C5-204ENST00000372108 AMPD2Q01433 879 aa16.84■□□□□ 0.29
GTF3C5-204ENST00000372108 PRPF4BQ13523 1007 aaKnown RBP16.84■□□□□ 0.29
GTF3C5-204ENST00000372108 BMS1Q14692 1282 aaKnown RBP16.84■□□□□ 0.29
GTF3C5-204ENST00000372108 KIAA0753Q2KHM9 967 aa16.84■□□□□ 0.29
GTF3C5-204ENST00000372108 ZACNQ401N2 412 aa16.84■□□□□ 0.29
GTF3C5-204ENST00000372108 C10orf76Q5T2E6 689 aa16.84■□□□□ 0.29
GTF3C5-204ENST00000372108 ALKBH5Q6P6C2 394 aaKnown RBP16.84■□□□□ 0.29
GTF3C5-204ENST00000372108 VPS36Q86VN1 386 aa16.84■□□□□ 0.29
GTF3C5-204ENST00000372108 PPM1KQ8N3J5 372 aa16.84■□□□□ 0.29
GTF3C5-204ENST00000372108 SMC1BQ8NDV3 1235 aa16.84■□□□□ 0.29
GTF3C5-204ENST00000372108 LNX1Q8TBB1 728 aaPredicted RBP16.84■□□□□ 0.29
GTF3C5-204ENST00000372108 ELMO3Q96BJ8 720 aa16.84■□□□□ 0.29
GTF3C5-204ENST00000372108 TMEM88BA6NKF7 163 aa16.83■□□□□ 0.28
GTF3C5-204ENST00000372108 ENC1O14682 589 aa16.83■□□□□ 0.28
GTF3C5-204ENST00000372108 VTNP04004 478 aa16.83■□□□□ 0.28
GTF3C5-204ENST00000372108 IRX5P78411 483 aaPredicted RBP16.83■□□□□ 0.28
GTF3C5-204ENST00000372108 NCBP1Q09161 790 aaKnown RBP16.83■□□□□ 0.28
GTF3C5-204ENST00000372108 GRM1Q13255 1194 aa16.83■□□□□ 0.28
GTF3C5-204ENST00000372108 TDRD10Q5VZ19 366 aaKnown RBP16.83■□□□□ 0.28
GTF3C5-204ENST00000372108 TLK2Q86UE8 772 aa16.83■□□□□ 0.28
GTF3C5-204ENST00000372108 TATDN2Q93075 761 aa16.83■□□□□ 0.28
GTF3C5-204ENST00000372108 HHIPL1Q96JK4 782 aa16.83■□□□□ 0.28
GTF3C5-204ENST00000372108 NT5C1BQ96P26 610 aa16.83■□□□□ 0.28
GTF3C5-204ENST00000372108 PI4K2AQ9BTU6 479 aa16.83■□□□□ 0.28
GTF3C5-204ENST00000372108 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.83■□□□□ 0.28
GTF3C5-204ENST00000372108 CDC23Q9UJX2 597 aa16.83■□□□□ 0.28
GTF3C5-204ENST00000372108 AKT3Q9Y243 479 aa16.83■□□□□ 0.28
GTF3C5-204ENST00000372108 V9GYY5 206 aaPredicted RBP16.83■□□□□ 0.28
GTF3C5-204ENST00000372108 A0A087WZ62 844 aa16.82■□□□□ 0.28
GTF3C5-204ENST00000372108 OGTO15294 1046 aa16.82■□□□□ 0.28
GTF3C5-204ENST00000372108 ATP1A1P05023 1023 aaKnown RBP16.82■□□□□ 0.28
GTF3C5-204ENST00000372108 TMOD1P28289 359 aa16.82■□□□□ 0.28
GTF3C5-204ENST00000372108 PHKA2P46019 1235 aa16.82■□□□□ 0.28
GTF3C5-204ENST00000372108 MFAP3P55082 362 aa16.82■□□□□ 0.28
GTF3C5-204ENST00000372108 TUBB2AQ13885 445 aa16.82■□□□□ 0.28
GTF3C5-204ENST00000372108 ATF7IP2Q5U623 682 aa16.82■□□□□ 0.28
GTF3C5-204ENST00000372108 DNAAF5Q86Y56 855 aa16.82■□□□□ 0.28
GTF3C5-204ENST00000372108 IFNLR1Q8IU57 520 aaPredicted RBP16.82■□□□□ 0.28
GTF3C5-204ENST00000372108 FAM71AQ8IYT1 594 aa16.82■□□□□ 0.28
GTF3C5-204ENST00000372108 RNF10Q8N5U6 811 aaKnown RBP16.82■□□□□ 0.28
GTF3C5-204ENST00000372108 TRIM58Q8NG06 486 aa16.82■□□□□ 0.28
GTF3C5-204ENST00000372108 PPP1R16BQ96T49 567 aa16.82■□□□□ 0.28
GTF3C5-204ENST00000372108 CGRRF1Q99675 332 aa16.82■□□□□ 0.28
GTF3C5-204ENST00000372108 FDXACB1Q9BRP7 624 aaPredicted RBP16.82■□□□□ 0.28
GTF3C5-204ENST00000372108 TUBB2BQ9BVA1 445 aa16.82■□□□□ 0.28
GTF3C5-204ENST00000372108 HDAC6Q9UBN7 1215 aa16.82■□□□□ 0.28
GTF3C5-204ENST00000372108 TACC1O75410 805 aa16.82■□□□□ 0.28
GTF3C5-204ENST00000372108 VNN1O95497 513 aa16.82■□□□□ 0.28
GTF3C5-204ENST00000372108 PAPD7Q5XG87 772 aaKnown RBP16.82■□□□□ 0.28
GTF3C5-204ENST00000372108 EEF1DP3Q658K8 133 aa16.82■□□□□ 0.28
GTF3C5-204ENST00000372108 MPZL3Q6UWV2 235 aa16.82■□□□□ 0.28
GTF3C5-204ENST00000372108 GLYCTKQ8IVS8 523 aa16.82■□□□□ 0.28
GTF3C5-204ENST00000372108 BRSK2Q8IWQ3 736 aa16.82■□□□□ 0.28
GTF3C5-204ENST00000372108 SHC3Q92529 594 aa16.82■□□□□ 0.28
GTF3C5-204ENST00000372108 KAT2BQ92831 832 aa16.82■□□□□ 0.28
GTF3C5-204ENST00000372108 SETD4Q9NVD3 440 aa16.82■□□□□ 0.28
GTF3C5-204ENST00000372108 ZC3H11AO75152 810 aaKnown RBP eCLIP16.81■□□□□ 0.283e-9■■■□□ 15.2
GTF3C5-204ENST00000372108 CSDE1O75534 798 aaKnown RBP16.81■□□□□ 0.28
GTF3C5-204ENST00000372108 F2P00734 622 aa16.81■□□□□ 0.28
GTF3C5-204ENST00000372108 HLA-DRAP01903 254 aa16.81■□□□□ 0.28
GTF3C5-204ENST00000372108 AMHR2Q16671 573 aa16.81■□□□□ 0.28
GTF3C5-204ENST00000372108 FAM187BQ17R55 369 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms