RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 SUCLA2Q9P2R7 463 aaPredicted RBP12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 ANGPTL2Q9UKU9 493 aa12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 A0A0G2JND7 137 aa12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 ZWINTO95229 277 aa12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 LMNAP02545 664 aaKnown RBP12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 PRKCBP05771 671 aa12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 PAMP19021 973 aa12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 ATP6V1E2Q96A05 226 aa12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 LRRC37BQ96QE4 947 aa12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 MMP19Q99542 508 aa12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 TMEM8AQ9HCN3 771 aa12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 CDH16O75309 829 aa12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 RPSAP08865 295 aaKnown RBP12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 ST3GAL1Q11201 340 aa12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 THEM5Q8N1Q8 247 aa12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 CARD9Q9H257 536 aa12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 BFARQ9NZS9 450 aa12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 PPP1R9AQ9ULJ8 1098 aa12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 ANKRD65E5RJM6 399 aa12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 SLC37A4O43826 429 aa12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 PRLRP16471 622 aa12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 MX2P20592 715 aa12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 CYP2C19P33261 490 aa12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 MDH1P40925 334 aaKnown RBP12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 ROR1Q01973 937 aa12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 WDR72Q3MJ13 1102 aa12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 ZC2HC1CQ53FD0 456 aaPredicted RBP12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 ZBED8Q8IZ13 594 aa12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 PPM1NQ8N819 430 aa12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 USP38Q8NB14 1042 aa12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 PPARGC1AQ9UBK2 798 aaKnown RBP12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 ANGPTL3Q9Y5C1 460 aa12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 PXDNQ92626 1479 aa12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 KPNA7A9QM74 516 aa12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 RFC5P40937 340 aa12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 PKN1Q16512 942 aa12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 SGSM1Q2NKQ1 1148 aa12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 OTUD5Q96G74 571 aa12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 ZNF560Q96MR9 790 aa12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 PSD3Q9NYI0 1048 aa12.57□□□□□ -0.4
DEPDC1-201ENST00000370966 ASAP2O43150 1006 aa12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 HSPA8P11142 646 aaKnown RBP12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 ARSEP51690 589 aa12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 CDH6P55285 790 aa12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 CDC42EP1Q00587 391 aa12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 NCOA4Q13772 614 aa12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 TAF11Q15544 211 aa12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 ANKRD20A4Q4UJ75 823 aa12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 ANKRD20A8PQ5CZ79 823 aa12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 ANKRD20A2Q5SQ80 823 aa12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 ANKRD20A1Q5TYW2 823 aa12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 ZNF677Q86XU0 584 aa12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 HAUS8Q9BT25 410 aa12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 MOV10L1Q9BXT6 1211 aaKnown RBP12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 EHD4Q9H223 541 aa12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 PPCSQ9HAB8 311 aa12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 KCNH7Q9NS40 1196 aa12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 APOBEC2Q9Y235 224 aaKnown RBP12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 ALG6Q9Y672 507 aa12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 GOLGA8MH3BSY2 632 aa12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 GYG2O15488 501 aa12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 HSPA4LO95757 839 aa12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 KRT10P13645 584 aa12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 NCF2P19878 526 aaPredicted RBP12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 ERVK-24P63145 666 aa12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 ART3Q13508 389 aa12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 C2orf69Q8N8R5 385 aa12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 TGS1Q96RS0 853 aaKnown RBP12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 RIOX1Q9H6W3 641 aa12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 CNOT7Q9UIV1 285 aaKnown RBP12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 HPCAL4Q9UM19 191 aa12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 IGSF9BQ9UPX0 1349 aa12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 CFAP73A6NFT4 308 aa12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 MSH4O15457 936 aa12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 HSPA9P38646 679 aaKnown RBP12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 HIF1AQ16665 826 aa12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 PPWD1Q96BP3 646 aaKnown RBP12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 ZDHHC15Q96MV8 337 aa12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 SENP7Q9BQF6 1050 aa12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 SH2D3AQ9BRG2 576 aa12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 RTFDC1Q9BY42 306 aaPredicted RBP12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 NAGPAQ9UK23 515 aa12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 MAGED2Q9UNF1 606 aaPredicted RBP12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 SALL1Q9NSC2 1324 aa12.56□□□□□ -0.4
DEPDC1-201ENST00000370966 A8MXQ7 604 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 ACOT2P49753 483 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 KLK7P49862 253 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 LMBRD2Q68DH5 695 aaPredicted RBP12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 RWDD4Q6NW29 188 aaKnown RBP12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 C4orf50Q6ZRC1 276 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 MICALL2Q8IY33 904 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 DCLK2Q8N568 766 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 TNIP3Q96KP6 325 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 ISCUQ9H1K1 167 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 AGPAT3Q9NRZ7 376 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 SPECC1L-ADORA2AF8WAN1 911 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 MAP3K7O43318 606 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 TXNP10599 105 aaKnown RBP12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 TAC1P20366 129 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms