RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 DEPTORQ8TB45 409 aa16.71■□□□□ 0.27
SS18L1-202ENST00000370848 RIPOR3Q96MK2 946 aa16.71■□□□□ 0.27
SS18L1-202ENST00000370848 EIF2AQ9BY44 585 aaKnown RBP16.71■□□□□ 0.27
SS18L1-202ENST00000370848 RSAD1Q9HA92 442 aa16.71■□□□□ 0.27
SS18L1-202ENST00000370848 UBN1Q9NPG3 1134 aa16.71■□□□□ 0.27
SS18L1-202ENST00000370848 MYH15Q9Y2K3 1946 aa16.7■□□□□ 0.26
SS18L1-202ENST00000370848 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.7■□□□□ 0.26
SS18L1-202ENST00000370848 DDHD2O94830 711 aa16.7■□□□□ 0.26
SS18L1-202ENST00000370848 C1RP00736 705 aa16.7■□□□□ 0.26
SS18L1-202ENST00000370848 ARF4P18085 180 aaPredicted RBP16.7■□□□□ 0.26
SS18L1-202ENST00000370848 GUCY2CP25092 1073 aa16.7■□□□□ 0.26
SS18L1-202ENST00000370848 PTPN5P54829 565 aa16.7■□□□□ 0.26
SS18L1-202ENST00000370848 PEX3P56589 373 aa16.7■□□□□ 0.26
SS18L1-202ENST00000370848 DSC1Q08554 894 aa16.7■□□□□ 0.26
SS18L1-202ENST00000370848 GPBP1Q86WP2 473 aa16.7■□□□□ 0.26
SS18L1-202ENST00000370848 SUGP1Q8IWZ8 645 aaKnown RBP16.7■□□□□ 0.26
SS18L1-202ENST00000370848 GPR65Q8IYL9 337 aa16.7■□□□□ 0.26
SS18L1-202ENST00000370848 SMG8Q8ND04 991 aaKnown RBP16.7■□□□□ 0.26
SS18L1-202ENST00000370848 URGCPQ8TCY9 931 aa16.7■□□□□ 0.26
SS18L1-202ENST00000370848 KIFAP3Q92845 792 aa16.7■□□□□ 0.26
SS18L1-202ENST00000370848 PANK2Q9BZ23 570 aa16.7■□□□□ 0.26
SS18L1-202ENST00000370848 CCDC113Q9H0I3 377 aa16.7■□□□□ 0.26
SS18L1-202ENST00000370848 SORCS3Q9UPU3 1222 aa16.7■□□□□ 0.26
SS18L1-202ENST00000370848 CCDC169A6NNP5 214 aa16.69■□□□□ 0.26
SS18L1-202ENST00000370848 C2CD4DB7Z1M9 353 aa16.69■□□□□ 0.26
SS18L1-202ENST00000370848 PPP6R2O75170 966 aa16.69■□□□□ 0.26
SS18L1-202ENST00000370848 EPCAMP16422 314 aa16.69■□□□□ 0.26
SS18L1-202ENST00000370848 NPTX2P47972 431 aa16.69■□□□□ 0.26
SS18L1-202ENST00000370848 CLCN4P51793 760 aa16.69■□□□□ 0.26
SS18L1-202ENST00000370848 AFF1P51825 1210 aaKnown RBP16.69■□□□□ 0.26
SS18L1-202ENST00000370848 TCF15Q12870 199 aa16.69■□□□□ 0.26
SS18L1-202ENST00000370848 AXDND1Q5T1B0 1012 aaPredicted RBP16.69■□□□□ 0.26
SS18L1-202ENST00000370848 IER5LQ5T953 404 aa16.69■□□□□ 0.26
SS18L1-202ENST00000370848 ZBTB8OSQ8IWT0 167 aa16.69■□□□□ 0.26
SS18L1-202ENST00000370848 KCTD17Q8N5Z5 321 aa16.69■□□□□ 0.26
SS18L1-202ENST00000370848 LARP4BQ92615 738 aaKnown RBP16.69■□□□□ 0.26
SS18L1-202ENST00000370848 IFT74Q96LB3 600 aa16.69■□□□□ 0.26
SS18L1-202ENST00000370848 FZD8Q9H461 694 aa16.69■□□□□ 0.26
SS18L1-202ENST00000370848 CDH22Q9UJ99 828 aa16.69■□□□□ 0.26
SS18L1-202ENST00000370848 C2orf16Q68DN1 1984 aa16.68■□□□□ 0.26
SS18L1-202ENST00000370848 PRKCBP05771 671 aa16.68■□□□□ 0.26
SS18L1-202ENST00000370848 RNASELQ05823 741 aaKnown RBP16.68■□□□□ 0.26
SS18L1-202ENST00000370848 MTMR3Q13615 1198 aa16.68■□□□□ 0.26
SS18L1-202ENST00000370848 PPP2R5AQ15172 486 aa16.68■□□□□ 0.26
SS18L1-202ENST00000370848 NOTUMQ6P988 496 aa16.68■□□□□ 0.26
SS18L1-202ENST00000370848 SHC4Q6S5L8 630 aa16.68■□□□□ 0.26
SS18L1-202ENST00000370848 PPP4R3CPQ6ZMV5 832 aa16.68■□□□□ 0.26
SS18L1-202ENST00000370848 C15orf39Q6ZRI6 1047 aa16.68■□□□□ 0.26
SS18L1-202ENST00000370848 TAS1R3Q7RTX0 852 aa16.68■□□□□ 0.26
SS18L1-202ENST00000370848 GPR149Q86SP6 731 aa16.68■□□□□ 0.26
SS18L1-202ENST00000370848 COLGALT2Q8IYK4 626 aa16.68■□□□□ 0.26
SS18L1-202ENST00000370848 PDILTQ8N807 584 aa16.68■□□□□ 0.26
SS18L1-202ENST00000370848 CMASQ8NFW8 434 aaPredicted RBP16.68■□□□□ 0.26
SS18L1-202ENST00000370848 AUTS2Q8WXX7 1259 aa16.68■□□□□ 0.26
SS18L1-202ENST00000370848 DRC1Q96MC2 740 aa16.68■□□□□ 0.26
SS18L1-202ENST00000370848 REEP2Q9BRK0 252 aa16.68■□□□□ 0.26
SS18L1-202ENST00000370848 C2orf40Q9H1Z8 148 aa16.68■□□□□ 0.26
SS18L1-202ENST00000370848 SFXN1Q9H9B4 322 aa16.68■□□□□ 0.26
SS18L1-202ENST00000370848 PRMT7Q9NVM4 692 aaPredicted RBP16.68■□□□□ 0.26
SS18L1-202ENST00000370848 MARCH5Q9NX47 278 aa16.68■□□□□ 0.26
SS18L1-202ENST00000370848 INPP5FQ9Y2H2 1132 aa16.68■□□□□ 0.26
SS18L1-202ENST00000370848 HES2Q9Y543 173 aa16.68■□□□□ 0.26
SS18L1-202ENST00000370848 DMDP11532 3685 aa16.68■□□□□ 0.26
SS18L1-202ENST00000370848 TDRD15B5MCY1 1934 aaKnown RBP16.67■□□□□ 0.26
SS18L1-202ENST00000370848 NRP1O14786 923 aa16.67■□□□□ 0.26
SS18L1-202ENST00000370848 SLC16A4O15374 487 aa16.67■□□□□ 0.26
SS18L1-202ENST00000370848 CUTAO60888 179 aa16.67■□□□□ 0.26
SS18L1-202ENST00000370848 NPTXRO95502 500 aa16.67■□□□□ 0.26
SS18L1-202ENST00000370848 SOD2P04179 222 aa16.67■□□□□ 0.26
SS18L1-202ENST00000370848 DDIT3P35638 169 aa16.67■□□□□ 0.26
SS18L1-202ENST00000370848 TXLNAP40222 546 aa16.67■□□□□ 0.26
SS18L1-202ENST00000370848 DMP1Q13316 513 aaPredicted RBP16.67■□□□□ 0.26
SS18L1-202ENST00000370848 RRAGBQ5VZM2 374 aa16.67■□□□□ 0.26
SS18L1-202ENST00000370848 EEF1DP3Q658K8 133 aa16.67■□□□□ 0.26
SS18L1-202ENST00000370848 CYP26C1Q6V0L0 522 aa16.67■□□□□ 0.26
SS18L1-202ENST00000370848 PLCD3Q8N3E9 789 aa16.67■□□□□ 0.26
SS18L1-202ENST00000370848 KREMEN2Q8NCW0 462 aa16.67■□□□□ 0.26
SS18L1-202ENST00000370848 KLHL5Q96PQ7 755 aa16.67■□□□□ 0.26
SS18L1-202ENST00000370848 HERC2P3Q9BVR0 1158 aa16.67■□□□□ 0.26
SS18L1-202ENST00000370848 APOL5Q9BWW9 433 aa16.67■□□□□ 0.26
SS18L1-202ENST00000370848 RNF39Q9H2S5 420 aa16.67■□□□□ 0.26
SS18L1-202ENST00000370848 CCDC39Q9UFE4 941 aa16.67■□□□□ 0.26
SS18L1-202ENST00000370848 PCDHA7Q9UN72 937 aa16.67■□□□□ 0.26
SS18L1-202ENST00000370848 IPPQ9Y573 584 aa16.67■□□□□ 0.26
SS18L1-202ENST00000370848 ALDH2P05091 517 aa16.66■□□□□ 0.26
SS18L1-202ENST00000370848 CNPP09543 421 aaKnown RBP16.66■□□□□ 0.26
SS18L1-202ENST00000370848 PLS3P13797 630 aa16.66■□□□□ 0.26
SS18L1-202ENST00000370848 AVPR2P30518 371 aa16.66■□□□□ 0.26
SS18L1-202ENST00000370848 ME1P48163 572 aa16.66■□□□□ 0.26
SS18L1-202ENST00000370848 PLXNA3P51805 1871 aa16.66■□□□□ 0.26
SS18L1-202ENST00000370848 VCPP55072 806 aaKnown RBP16.66■□□□□ 0.26
SS18L1-202ENST00000370848 MAPK6Q16659 721 aa16.66■□□□□ 0.26
SS18L1-202ENST00000370848 FAM187BQ17R55 369 aa16.66■□□□□ 0.26
SS18L1-202ENST00000370848 ATAT1Q5SQI0 421 aa16.66■□□□□ 0.26
SS18L1-202ENST00000370848 RARS2Q5T160 578 aaKnown RBP16.66■□□□□ 0.26
SS18L1-202ENST00000370848 NT5DC1Q5TFE4 455 aa16.66■□□□□ 0.26
SS18L1-202ENST00000370848 KCNG4Q8TDN1 519 aa16.66■□□□□ 0.26
SS18L1-202ENST00000370848 TIPINQ9BVW5 301 aa16.66■□□□□ 0.26
SS18L1-202ENST00000370848 APOL6Q9BWW8 343 aa16.66■□□□□ 0.26
SS18L1-202ENST00000370848 EMILIN2Q9BXX0 1053 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms