RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 FAM96AQ9H5X1 160 aa13.43□□□□□ -0.26
GPC4-201ENST00000370828 MTO1Q9Y2Z2 717 aaKnown RBP13.43□□□□□ -0.26
GPC4-201ENST00000370828 PRR36Q9H6K5 1346 aa13.43□□□□□ -0.26
GPC4-201ENST00000370828 RCAN1P53805 252 aa13.42□□□□□ -0.26
GPC4-201ENST00000370828 DAB2P98082 770 aa13.42□□□□□ -0.26
GPC4-201ENST00000370828 MAP3K14Q99558 947 aa13.42□□□□□ -0.26
GPC4-201ENST00000370828 AGPAT1Q99943 283 aa13.42□□□□□ -0.26
GPC4-201ENST00000370828 PFASO15067 1338 aa13.42□□□□□ -0.26
GPC4-201ENST00000370828 MLH3Q9UHC1 1453 aa13.42□□□□□ -0.26
GPC4-201ENST00000370828 LAMC1P11047 1609 aa13.42□□□□□ -0.26
GPC4-201ENST00000370828 F8VZ95 297 aa13.42□□□□□ -0.26
GPC4-201ENST00000370828 S100A1P23297 94 aa13.42□□□□□ -0.26
GPC4-201ENST00000370828 PSMA2P25787 234 aa13.42□□□□□ -0.26
GPC4-201ENST00000370828 PSEN1P49768 467 aa13.42□□□□□ -0.26
GPC4-201ENST00000370828 TAF1BQ53T94 588 aaPredicted RBP13.42□□□□□ -0.26
GPC4-201ENST00000370828 SYCP2LQ5T4T6 812 aa13.42□□□□□ -0.26
GPC4-201ENST00000370828 PRPF39Q86UA1 669 aaKnown RBP13.42□□□□□ -0.26
GPC4-201ENST00000370828 ERICH1Q86X53 443 aa13.42□□□□□ -0.26
GPC4-201ENST00000370828 CATSPER2Q96P56 530 aa13.42□□□□□ -0.26
GPC4-201ENST00000370828 RPS6KC1Q96S38 1066 aa13.42□□□□□ -0.26
GPC4-201ENST00000370828 CAAP1Q9H8G2 361 aa13.42□□□□□ -0.26
GPC4-201ENST00000370828 ARHGAP20Q9P2F6 1191 aa13.42□□□□□ -0.26
GPC4-201ENST00000370828 RTCBQ9Y3I0 505 aaKnown RBP13.42□□□□□ -0.26
GPC4-201ENST00000370828 ARHGEF5Q12774 1597 aa13.42□□□□□ -0.26
GPC4-201ENST00000370828 O00370 1275 aa13.42□□□□□ -0.26
GPC4-201ENST00000370828 TNNC2P02585 160 aa13.42□□□□□ -0.26
GPC4-201ENST00000370828 PYGBP11216 843 aa13.42□□□□□ -0.26
GPC4-201ENST00000370828 CCNHP51946 323 aaPredicted RBP13.42□□□□□ -0.26
GPC4-201ENST00000370828 DDX18Q9NVP1 670 aaKnown RBP13.42□□□□□ -0.26
GPC4-201ENST00000370828 KLHL11Q9NVR0 708 aa13.42□□□□□ -0.26
GPC4-201ENST00000370828 LRCH1Q9Y2L9 728 aa13.42□□□□□ -0.26
GPC4-201ENST00000370828 ALG6Q9Y672 507 aa13.42□□□□□ -0.26
GPC4-201ENST00000370828 ZNF233A6NK53 670 aa13.42□□□□□ -0.26
GPC4-201ENST00000370828 DAB1O75553 588 aa13.42□□□□□ -0.26
GPC4-201ENST00000370828 GTF2IP78347 998 aa13.42□□□□□ -0.26
GPC4-201ENST00000370828 CEP55Q53EZ4 464 aa13.42□□□□□ -0.26
GPC4-201ENST00000370828 ZNF394Q53GI3 561 aa13.42□□□□□ -0.26
GPC4-201ENST00000370828 NAALADL2Q58DX5 795 aa13.42□□□□□ -0.26
GPC4-201ENST00000370828 GPATCH4Q5T3I0 446 aaKnown RBP13.42□□□□□ -0.26
GPC4-201ENST00000370828 RBBP8NLQ8NC74 664 aaPredicted RBP13.42□□□□□ -0.26
GPC4-201ENST00000370828 MTMR8Q96EF0 704 aa13.42□□□□□ -0.26
GPC4-201ENST00000370828 SERPINB12Q96P63 405 aa13.42□□□□□ -0.26
GPC4-201ENST00000370828 NEU2Q9Y3R4 380 aa13.42□□□□□ -0.26
GPC4-201ENST00000370828 PALLDQ8WX93 1383 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 NPHP3-ACAD11A0A0J9YXS1 232 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 HMGB2P26583 209 aaKnown RBP13.41□□□□□ -0.26
GPC4-201ENST00000370828 MAGEA4P43358 317 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 MORF4L2Q15014 288 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 KIF19Q2TAC6 998 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 PSMC3IPQ9P2W1 217 aaPredicted RBP13.41□□□□□ -0.26
GPC4-201ENST00000370828 ERVV-2B6SEH9 535 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 GSTA4O15217 222 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 P4HA1P13674 534 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 ENO3P13929 434 aaPredicted RBP13.41□□□□□ -0.26
GPC4-201ENST00000370828 ERVK-9P63128 1117 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 KCNJ2P63252 427 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 MAPK7Q13164 816 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 ACCSLQ4AC99 568 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 MTDHQ86UE4 582 aaKnown RBP13.41□□□□□ -0.26
GPC4-201ENST00000370828 CCNYL1Q8N7R7 359 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 TPCN2Q8NHX9 752 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 C18orf8Q96DM3 657 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 ZBED2Q9BTP6 218 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 OSBPL8Q9BZF1 889 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 KMT5AQ9NQR1 393 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 TRIM33Q9UPN9 1127 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 XDHP47989 1333 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 IQSEC2Q5JU85 1478 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 MYMKA6NI61 221 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 RSPH10B2B2RC85 870 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 RSPH10BP0C881 870 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 COMTP21964 271 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 IFI35P80217 286 aaPredicted RBP13.41□□□□□ -0.26
GPC4-201ENST00000370828 ROR2Q01974 943 aaKnown RBP13.41□□□□□ -0.26
GPC4-201ENST00000370828 STX3Q13277 289 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 ALX1Q15699 326 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 CDO1Q16878 200 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 CREG2Q8IUH2 290 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 KAT2BQ92831 832 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 RIOK1Q9BRS2 568 aaKnown RBP13.41□□□□□ -0.26
GPC4-201ENST00000370828 NXF1Q9UBU9 619 aaKnown RBP13.41□□□□□ -0.26
GPC4-201ENST00000370828 HESX1Q9UBX0 185 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 MID2Q9UJV3 735 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 IYDQ6PHW0 289 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 RHOT1Q8IXI2 618 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 SPICE1Q8N0Z3 855 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 C7orf25Q9BPX7 421 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 ANO3Q9BYT9 981 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 KLC2Q9H0B6 622 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 SEMA4AQ9H3S1 761 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 MANSC1Q9H8J5 431 aa13.41□□□□□ -0.26
GPC4-201ENST00000370828 E7ENQ6 273 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 EPHB2P29323 1055 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 TSPY1Q01534 308 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 DDR1Q08345 913 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 TEDDM1Q5T9Z0 273 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 TRIM67Q6ZTA4 783 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 DNAAF5Q86Y56 855 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 CNBD1Q8NA66 436 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 ANKRD27Q96NW4 1050 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms